RNA–Protein interactions for RNA: ENST00000376751.7

RNF39-202, Transcript of ring finger protein 39, humanhuman

TSL 1 (best) BASIC

Gene RNF39, Length 1,970 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39-202ENST00000376751 ECM1Q16610 540 aa24.31■■□□□ 1.48
RNF39-202ENST00000376751 SV2BQ7L1I2 683 aa24.31■■□□□ 1.48
RNF39-202ENST00000376751 AMPD3Q01432 767 aa24.3■■□□□ 1.48
RNF39-202ENST00000376751 MTERF4Q7Z6M4 381 aaKnown RBP24.3■■□□□ 1.48
RNF39-202ENST00000376751 LARP4BQ92615 738 aaKnown RBP24.3■■□□□ 1.48
RNF39-202ENST00000376751 RAD54LQ92698 747 aa24.3■■□□□ 1.48
RNF39-202ENST00000376751 P2RX5Q93086 422 aa24.3■■□□□ 1.48
RNF39-202ENST00000376751 CCDC47Q96A33 483 aaKnown RBP24.3■■□□□ 1.48
RNF39-202ENST00000376751 GMCL1Q96IK5 515 aa24.3■■□□□ 1.48
RNF39-202ENST00000376751 UIMC1Q96RL1 719 aa24.3■■□□□ 1.48
RNF39-202ENST00000376751 A0A1W2PRG0 241 aa24.29■■□□□ 1.48
RNF39-202ENST00000376751 GCFC2P16383 781 aaKnown RBP24.29■■□□□ 1.48
RNF39-202ENST00000376751 FECHP22830 423 aa24.29■■□□□ 1.48
RNF39-202ENST00000376751 CCNE1P24864 410 aa24.29■■□□□ 1.48
RNF39-202ENST00000376751 CCDC93Q567U6 631 aa24.29■■□□□ 1.48
RNF39-202ENST00000376751 CDK5RAP3Q96JB5 506 aa24.29■■□□□ 1.48
RNF39-202ENST00000376751 ANO3Q9BYT9 981 aa24.29■■□□□ 1.48
RNF39-202ENST00000376751 RAB34Q9BZG1 259 aa24.29■■□□□ 1.48
RNF39-202ENST00000376751 MRPL44Q9H9J2 332 aaKnown RBP24.29■■□□□ 1.48
RNF39-202ENST00000376751 CLRN2A0PK11 232 aa24.29■■□□□ 1.48
RNF39-202ENST00000376751 SPDYE2BA6NHP3 402 aa24.29■■□□□ 1.48
RNF39-202ENST00000376751 LGALS16A8MUM7 142 aa24.29■■□□□ 1.48
RNF39-202ENST00000376751 TCP10L2B9ZVM9 353 aa24.29■■□□□ 1.48
RNF39-202ENST00000376751 RAD17O75943 681 aa24.29■■□□□ 1.48
RNF39-202ENST00000376751 SPDYE6P0CI01 402 aa24.29■■□□□ 1.48
RNF39-202ENST00000376751 EEF1GP26641 437 aaKnown RBP24.29■■□□□ 1.48
RNF39-202ENST00000376751 ANKRD40Q6AI12 368 aa24.29■■□□□ 1.48
RNF39-202ENST00000376751 RSBN1LQ6PCB5 846 aaPredicted RBP24.29■■□□□ 1.48
RNF39-202ENST00000376751 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP24.29■■□□□ 1.48
RNF39-202ENST00000376751 SMCHD1A6NHR9 2005 aa24.28■■□□□ 1.48
RNF39-202ENST00000376751 PSMD14O00487 310 aa24.28■■□□□ 1.48
RNF39-202ENST00000376751 MEIS2O14770 477 aa24.28■■□□□ 1.48
RNF39-202ENST00000376751 UBXN1Q04323 297 aa24.28■■□□□ 1.48
RNF39-202ENST00000376751 RBM26Q5T8P6 1007 aaKnown RBP24.28■■□□□ 1.48
RNF39-202ENST00000376751 KRT79Q5XKE5 535 aa24.28■■□□□ 1.48
RNF39-202ENST00000376751 CNGA4Q8IV77 575 aa24.28■■□□□ 1.48
RNF39-202ENST00000376751 LRRN4CLQ8ND94 238 aa24.28■■□□□ 1.48
RNF39-202ENST00000376751 GMLQ99445 158 aa24.28■■□□□ 1.48
RNF39-202ENST00000376751 NAA15Q9BXJ9 866 aaKnown RBP24.28■■□□□ 1.48
RNF39-202ENST00000376751 NOL12Q9UGY1 213 aaKnown RBP eCLIP24.28■■□□□ 1.48
RNF39-202ENST00000376751 V9GYY5 206 aaPredicted RBP24.28■■□□□ 1.48
RNF39-202ENST00000376751 SYDE2Q5VT97 1194 aa24.27■■□□□ 1.48
RNF39-202ENST00000376751 CSGALNACT2Q8N6G5 542 aa24.27■■□□□ 1.48
RNF39-202ENST00000376751 TTLL6Q8N841 843 aa24.27■■□□□ 1.48
RNF39-202ENST00000376751 ZNF507Q8TCN5 953 aa24.27■■□□□ 1.48
RNF39-202ENST00000376751 EEF2KMTQ96G04 330 aa24.27■■□□□ 1.48
RNF39-202ENST00000376751 GLT8D2Q9H1C3 349 aa24.27■■□□□ 1.48
RNF39-202ENST00000376751 SLU7O95391 586 aaKnown RBP24.27■■□□□ 1.48
RNF39-202ENST00000376751 COBLL1Q53SF7 1204 aa24.27■■□□□ 1.48
RNF39-202ENST00000376751 CNNM4Q6P4Q7 775 aa24.27■■□□□ 1.48
RNF39-202ENST00000376751 UNC13DQ70J99 1090 aa24.27■■□□□ 1.48
RNF39-202ENST00000376751 DYMQ7RTS9 669 aa24.27■■□□□ 1.48
RNF39-202ENST00000376751 MB21D1Q8N884 522 aa24.27■■□□□ 1.48
RNF39-202ENST00000376751 NOC3LQ8WTT2 800 aaKnown RBP24.27■■□□□ 1.48
RNF39-202ENST00000376751 CCDC51Q96ER9 411 aa24.27■■□□□ 1.48
RNF39-202ENST00000376751 SLC39A2Q9NP94 309 aa24.27■■□□□ 1.48
RNF39-202ENST00000376751 ZNF277Q9NRM2 450 aaPredicted RBP24.27■■□□□ 1.48
RNF39-202ENST00000376751 ERO1AQ96HE7 468 aa24.26■■□□□ 1.47
RNF39-202ENST00000376751 WDR24Q96S15 920 aa24.26■■□□□ 1.47
RNF39-202ENST00000376751 SEMA6BQ9H3T3 888 aa24.26■■□□□ 1.47
RNF39-202ENST00000376751 ADGRG1Q9Y653 693 aa24.26■■□□□ 1.47
RNF39-202ENST00000376751 CNTNAP1P78357 1384 aa24.26■■□□□ 1.47
RNF39-202ENST00000376751 A0A0U1RQJ8 604 aa24.25■■□□□ 1.47
RNF39-202ENST00000376751 ERVK-24P63145 666 aa24.25■■□□□ 1.47
RNF39-202ENST00000376751 USH1GQ495M9 461 aa24.25■■□□□ 1.47
RNF39-202ENST00000376751 ATRIPQ8WXE1 791 aa24.25■■□□□ 1.47
RNF39-202ENST00000376751 CRYGNQ8WXF5 182 aa24.25■■□□□ 1.47
RNF39-202ENST00000376751 MBOAT7Q96N66 472 aa24.25■■□□□ 1.47
RNF39-202ENST00000376751 PSMD1Q99460 953 aa24.25■■□□□ 1.47
RNF39-202ENST00000376751 AMNQ9BXJ7 453 aa24.25■■□□□ 1.47
RNF39-202ENST00000376751 XPO5Q9HAV4 1204 aaKnown RBP eCLIP24.25■■□□□ 1.47
RNF39-202ENST00000376751 KCNMB3Q9NPA1 279 aa24.25■■□□□ 1.47
RNF39-202ENST00000376751 ABHD10Q9NUJ1 306 aa24.25■■□□□ 1.47
RNF39-202ENST00000376751 ZNF70Q9UC06 446 aaPredicted RBP24.25■■□□□ 1.47
RNF39-202ENST00000376751 BICDL2A1A5D9 508 aa24.25■■□□□ 1.47
RNF39-202ENST00000376751 GOLGA6L9A6NEM1 432 aa24.25■■□□□ 1.47
RNF39-202ENST00000376751 VIL1P09327 827 aaKnown RBP24.25■■□□□ 1.47
RNF39-202ENST00000376751 BMP3P12645 472 aa24.25■■□□□ 1.47
RNF39-202ENST00000376751 KCNA3P22001 575 aa24.25■■□□□ 1.47
RNF39-202ENST00000376751 IKQ13123 557 aaPredicted RBP24.25■■□□□ 1.47
RNF39-202ENST00000376751 TRIM14Q14142 442 aa24.25■■□□□ 1.47
RNF39-202ENST00000376751 KIAA1755Q5JYT7 1200 aa24.25■■□□□ 1.47
RNF39-202ENST00000376751 FBXO11Q86XK2 927 aa24.25■■□□□ 1.47
RNF39-202ENST00000376751 SPICE1Q8N0Z3 855 aa24.25■■□□□ 1.47
RNF39-202ENST00000376751 ARID3AQ99856 593 aa24.25■■□□□ 1.47
RNF39-202ENST00000376751 ZBTB12Q9Y330 459 aaPredicted RBP24.25■■□□□ 1.47
RNF39-202ENST00000376751 CYP3A7-CYP3A51PA0A087WV96 503 aa24.24■■□□□ 1.47
RNF39-202ENST00000376751 PVALEFA0A1B0GWK0 134 aa24.24■■□□□ 1.47
RNF39-202ENST00000376751 TPM1P09493 284 aa24.24■■□□□ 1.47
RNF39-202ENST00000376751 DPEP1P16444 411 aa24.24■■□□□ 1.47
RNF39-202ENST00000376751 CYP3A7P24462 503 aa24.24■■□□□ 1.47
RNF39-202ENST00000376751 ECE1P42892 770 aa24.24■■□□□ 1.47
RNF39-202ENST00000376751 LARGE2Q8N3Y3 721 aa24.24■■□□□ 1.47
RNF39-202ENST00000376751 NAP1L4Q99733 375 aaKnown RBP24.24■■□□□ 1.47
RNF39-202ENST00000376751 TMOD2Q9NZR1 351 aa24.24■■□□□ 1.47
RNF39-202ENST00000376751 MAGEC2Q9UBF1 373 aaPredicted RBP24.24■■□□□ 1.47
RNF39-202ENST00000376751 PCDHA12Q9UN75 941 aa24.24■■□□□ 1.47
RNF39-202ENST00000376751 OPLAHO14841 1288 aa24.23■■□□□ 1.47
RNF39-202ENST00000376751 NKRFO15226 690 aaKnown RBP eCLIP24.23■■□□□ 1.47
RNF39-202ENST00000376751 MARCH6O60337 910 aa24.23■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms