RNA–Protein interactions for RNA: ENST00000376724.6

TRIM40-206, Transcript of tripartite motif containing 40, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TRIM40, Length 2,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-206ENST00000376724 DICER1Q9UPY3 1922 aaKnown RBP14.55□□□□□ -0.08
TRIM40-206ENST00000376724 WDR46O15213 610 aaKnown RBP14.54□□□□□ -0.08
TRIM40-206ENST00000376724 CD44P16070 742 aaKnown RBP14.54□□□□□ -0.08
TRIM40-206ENST00000376724 PTGS1P23219 599 aa14.54□□□□□ -0.08
TRIM40-206ENST00000376724 PDIA5Q14554 519 aa14.54□□□□□ -0.08
TRIM40-206ENST00000376724 MCTP2Q6DN12 878 aa14.54□□□□□ -0.08
TRIM40-206ENST00000376724 DLK2Q6UY11 383 aa14.54□□□□□ -0.08
TRIM40-206ENST00000376724 CCDC186Q7Z3E2 898 aa14.54□□□□□ -0.08
TRIM40-206ENST00000376724 SNX29Q8TEQ0 813 aa14.54□□□□□ -0.08
TRIM40-206ENST00000376724 LPAR1Q92633 364 aa14.54□□□□□ -0.08
TRIM40-206ENST00000376724 HOOK2Q96ED9 719 aa14.54□□□□□ -0.08
TRIM40-206ENST00000376724 MRFAP1L1Q96HT8 127 aa14.54□□□□□ -0.08
TRIM40-206ENST00000376724 AGBL1Q96MI9 1066 aa14.54□□□□□ -0.08
TRIM40-206ENST00000376724 SLF1Q9BQI6 1058 aa14.54□□□□□ -0.08
TRIM40-206ENST00000376724 GINM1Q9NU53 330 aa14.54□□□□□ -0.08
TRIM40-206ENST00000376724 SBF1O95248 1867 aa14.54□□□□□ -0.08
TRIM40-206ENST00000376724 GCOM1H8Y6P7 765 aaPredicted RBP14.54□□□□□ -0.08
TRIM40-206ENST00000376724 FLOT1O75955 427 aa14.54□□□□□ -0.08
TRIM40-206ENST00000376724 POLR2MP0CAP2 368 aa14.54□□□□□ -0.08
TRIM40-206ENST00000376724 STX17P56962 302 aa14.54□□□□□ -0.08
TRIM40-206ENST00000376724 KRT79Q5XKE5 535 aa14.54□□□□□ -0.08
TRIM40-206ENST00000376724 CPXCR1Q8N123 301 aa14.54□□□□□ -0.08
TRIM40-206ENST00000376724 PRPF38AQ8NAV1 312 aaKnown RBP14.54□□□□□ -0.08
TRIM40-206ENST00000376724 NUDT12Q9BQG2 462 aa14.54□□□□□ -0.08
TRIM40-206ENST00000376724 XPO4Q9C0E2 1151 aaKnown RBP14.54□□□□□ -0.08
TRIM40-206ENST00000376724 EMILIN3Q9NT22 766 aa14.54□□□□□ -0.08
TRIM40-206ENST00000376724 KBTBD4Q9NVX7 518 aa14.54□□□□□ -0.08
TRIM40-206ENST00000376724 CCPG1Q9ULG6 757 aa14.54□□□□□ -0.08
TRIM40-206ENST00000376724 MRPL11Q9Y3B7 192 aaKnown RBP14.54□□□□□ -0.08
TRIM40-206ENST00000376724 NFE2L3Q9Y4A8 694 aa14.54□□□□□ -0.08
TRIM40-206ENST00000376724 PIK3CDO00329 1044 aa14.53□□□□□ -0.08
TRIM40-206ENST00000376724 SERPINC1P01008 464 aa14.53□□□□□ -0.08
TRIM40-206ENST00000376724 VCAM1P19320 739 aa14.53□□□□□ -0.08
TRIM40-206ENST00000376724 CDC25BP30305 580 aa14.53□□□□□ -0.08
TRIM40-206ENST00000376724 ZNF76P36508 570 aa14.53□□□□□ -0.08
TRIM40-206ENST00000376724 SREBF1P36956 1147 aa14.53□□□□□ -0.08
TRIM40-206ENST00000376724 UBXN2AP68543 259 aa14.53□□□□□ -0.08
TRIM40-206ENST00000376724 FANCCQ00597 558 aa14.53□□□□□ -0.08
TRIM40-206ENST00000376724 GRB10Q13322 594 aa14.53□□□□□ -0.08
TRIM40-206ENST00000376724 C9orf131Q5VYM1 1079 aa14.53□□□□□ -0.08
TRIM40-206ENST00000376724 CRYGNQ8WXF5 182 aa14.53□□□□□ -0.08
TRIM40-206ENST00000376724 CUEDC2Q9H467 287 aa14.53□□□□□ -0.08
TRIM40-206ENST00000376724 RMND1Q9NWS8 449 aa14.53□□□□□ -0.08
TRIM40-206ENST00000376724 ZNF112Q9UJU3 913 aa14.53□□□□□ -0.08
TRIM40-206ENST00000376724 ZHX2Q9Y6X8 837 aa14.53□□□□□ -0.08
TRIM40-206ENST00000376724 CYP3A7-CYP3A51PA0A087WV96 503 aa14.53□□□□□ -0.08
TRIM40-206ENST00000376724 FAM86B1E9PN63 330 aa14.53□□□□□ -0.08
TRIM40-206ENST00000376724 COBLO75128 1261 aa14.53□□□□□ -0.08
TRIM40-206ENST00000376724 FAM86B2P0C5J1 330 aa14.53□□□□□ -0.08
TRIM40-206ENST00000376724 PTPRAP18433 802 aa14.53□□□□□ -0.08
TRIM40-206ENST00000376724 CYP3A7P24462 503 aa14.53□□□□□ -0.08
TRIM40-206ENST00000376724 CCDC144BQ3MJ40 725 aa14.53□□□□□ -0.08
TRIM40-206ENST00000376724 ENOX1Q8TC92 643 aaKnown RBP14.53□□□□□ -0.08
TRIM40-206ENST00000376724 MED15Q96RN5 788 aa14.53□□□□□ -0.08
TRIM40-206ENST00000376724 RPAP3Q9H6T3 665 aaPredicted RBP14.53□□□□□ -0.08
TRIM40-206ENST00000376724 AS3MTQ9HBK9 375 aa14.53□□□□□ -0.08
TRIM40-206ENST00000376724 MAPK8IP1Q9UQF2 711 aa14.53□□□□□ -0.08
TRIM40-206ENST00000376724 PPP1R3GB7ZBB8 358 aa14.52□□□□□ -0.09
TRIM40-206ENST00000376724 CDK11BP21127 795 aaKnown RBP14.52□□□□□ -0.09
TRIM40-206ENST00000376724 ERCC5P28715 1186 aaPredicted RBP14.52□□□□□ -0.09
TRIM40-206ENST00000376724 USP14P54578 494 aa14.52□□□□□ -0.09
TRIM40-206ENST00000376724 BACE1P56817 501 aa14.52□□□□□ -0.09
TRIM40-206ENST00000376724 KMT5BQ4FZB7 885 aa14.52□□□□□ -0.09
TRIM40-206ENST00000376724 FILIP1Q7Z7B0 1213 aa14.52□□□□□ -0.09
TRIM40-206ENST00000376724 ZNF280CQ8ND82 737 aa14.52□□□□□ -0.09
TRIM40-206ENST00000376724 CYP2W1Q8TAV3 490 aa14.52□□□□□ -0.09
TRIM40-206ENST00000376724 KLRG1Q96E93 195 aa14.52□□□□□ -0.09
TRIM40-206ENST00000376724 PNMA5Q96PV4 448 aa14.52□□□□□ -0.09
TRIM40-206ENST00000376724 RAVER2Q9HCJ3 691 aaKnown RBP14.52□□□□□ -0.09
TRIM40-206ENST00000376724 KCNMB3Q9NPA1 279 aa14.52□□□□□ -0.09
TRIM40-206ENST00000376724 ADARB2Q9NS39 739 aaKnown RBP14.52□□□□□ -0.09
TRIM40-206ENST00000376724 CTNND2Q9UQB3 1225 aa14.52□□□□□ -0.09
TRIM40-206ENST00000376724 GDAQ9Y2T3 454 aa14.52□□□□□ -0.09
TRIM40-206ENST00000376724 ABCB11O95342 1321 aa14.52□□□□□ -0.09
TRIM40-206ENST00000376724 ICAM1P05362 532 aa14.51□□□□□ -0.09
TRIM40-206ENST00000376724 STAT3P40763 770 aa14.51□□□□□ -0.09
TRIM40-206ENST00000376724 UBASH3AP57075 661 aa14.51□□□□□ -0.09
TRIM40-206ENST00000376724 SUPT20HL1Q3ZLR7 823 aa14.51□□□□□ -0.09
TRIM40-206ENST00000376724 ZNF658Q5TYW1 1059 aaPredicted RBP14.51□□□□□ -0.09
TRIM40-206ENST00000376724 MOXD1Q6UVY6 613 aa14.51□□□□□ -0.09
TRIM40-206ENST00000376724 SLFN12Q8IYM2 578 aa14.51□□□□□ -0.09
TRIM40-206ENST00000376724 ZFP91Q96JP5 570 aaPredicted RBP14.51□□□□□ -0.09
TRIM40-206ENST00000376724 MBOAT7Q96N66 472 aa14.51□□□□□ -0.09
TRIM40-206ENST00000376724 KCNF1Q9H3M0 494 aa14.51□□□□□ -0.09
TRIM40-206ENST00000376724 MAGEF1Q9HAY2 307 aa14.51□□□□□ -0.09
TRIM40-206ENST00000376724 HOMER2Q9NSB8 354 aa14.51□□□□□ -0.09
TRIM40-206ENST00000376724 SAMSN1Q9NSI8 373 aaKnown RBP14.51□□□□□ -0.09
TRIM40-206ENST00000376724 CTDP1Q9Y5B0 961 aaPredicted RBP14.51□□□□□ -0.09
TRIM40-206ENST00000376724 PPP2R3BQ9Y5P8 575 aa14.51□□□□□ -0.09
TRIM40-206ENST00000376724 ZNF536O15090 1300 aa14.51□□□□□ -0.09
TRIM40-206ENST00000376724 SYNRGQ9UMZ2 1314 aa14.51□□□□□ -0.09
TRIM40-206ENST00000376724 TPM3P06753 285 aa14.51□□□□□ -0.09
TRIM40-206ENST00000376724 ALAS1P13196 640 aa14.51□□□□□ -0.09
TRIM40-206ENST00000376724 HMGCS2P54868 508 aa14.51□□□□□ -0.09
TRIM40-206ENST00000376724 ASIC1P78348 528 aa14.51□□□□□ -0.09
TRIM40-206ENST00000376724 MCM6Q14566 821 aa14.51□□□□□ -0.09
TRIM40-206ENST00000376724 ECM1Q16610 540 aa14.51□□□□□ -0.09
TRIM40-206ENST00000376724 Q4G0T1 1027 aa14.51□□□□□ -0.09
TRIM40-206ENST00000376724 SV2BQ7L1I2 683 aa14.51□□□□□ -0.09
TRIM40-206ENST00000376724 DCPSQ96C86 337 aaKnown RBP14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms