RNA–Protein interactions for RNA: ENST00000376709.8

VSX1-202, Transcript of visual system homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSX1, Length 2,192 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-202ENST00000376709 GCFC2P16383 781 aaKnown RBP22.64■■□□□ 1.21
VSX1-202ENST00000376709 GRIPAP1Q4V328 841 aa22.64■■□□□ 1.21
VSX1-202ENST00000376709 RSBN1LQ6PCB5 846 aaPredicted RBP22.64■■□□□ 1.21
VSX1-202ENST00000376709 NOC3LQ8WTT2 800 aaKnown RBP22.64■■□□□ 1.21
VSX1-202ENST00000376709 USP17L15C9J2P7 530 aa22.63■■□□□ 1.21
VSX1-202ENST00000376709 USP17L13C9JLJ4 530 aa22.63■■□□□ 1.21
VSX1-202ENST00000376709 USP17L11C9JVI0 530 aa22.63■■□□□ 1.21
VSX1-202ENST00000376709 USP17L18D6R9N7 530 aa22.63■■□□□ 1.21
VSX1-202ENST00000376709 USP17L22D6RA61 530 aa22.63■■□□□ 1.21
VSX1-202ENST00000376709 USP17L17D6RBQ6 530 aa22.63■■□□□ 1.21
VSX1-202ENST00000376709 USP17L19D6RCP7 530 aa22.63■■□□□ 1.21
VSX1-202ENST00000376709 USP17L20D6RJB6 530 aa22.63■■□□□ 1.21
VSX1-202ENST00000376709 F5H6K3 240 aa22.63■■□□□ 1.21
VSX1-202ENST00000376709 ENTPD3O75355 529 aa22.63■■□□□ 1.21
VSX1-202ENST00000376709 FCER1AP12319 257 aa22.63■■□□□ 1.21
VSX1-202ENST00000376709 PPP1R2P41236 205 aa22.63■■□□□ 1.21
VSX1-202ENST00000376709 KLRC3Q07444 240 aa22.63■■□□□ 1.21
VSX1-202ENST00000376709 USP17L24Q0WX57 530 aa22.63■■□□□ 1.21
VSX1-202ENST00000376709 MCM6Q14566 821 aa22.63■■□□□ 1.21
VSX1-202ENST00000376709 USP17L6PQ6QN14 398 aa22.63■■□□□ 1.21
VSX1-202ENST00000376709 SIAH1Q8IUQ4 282 aa22.63■■□□□ 1.21
VSX1-202ENST00000376709 P2RX5Q93086 422 aa22.63■■□□□ 1.21
VSX1-202ENST00000376709 PNMA5Q96PV4 448 aa22.63■■□□□ 1.21
VSX1-202ENST00000376709 BLOC1S4Q9NUP1 217 aa22.63■■□□□ 1.21
VSX1-202ENST00000376709 NOL12Q9UGY1 213 aaKnown RBP eCLIP22.63■■□□□ 1.21
VSX1-202ENST00000376709 V9GYY5 206 aaPredicted RBP22.63■■□□□ 1.21
VSX1-202ENST00000376709 ATRNL1Q5VV63 1379 aa22.63■■□□□ 1.21
VSX1-202ENST00000376709 CCNE1P24864 410 aa22.63■■□□□ 1.21
VSX1-202ENST00000376709 IKQ13123 557 aaPredicted RBP22.63■■□□□ 1.21
VSX1-202ENST00000376709 SLC16A10Q8TF71 515 aa22.63■■□□□ 1.21
VSX1-202ENST00000376709 CSRNP1Q96S65 589 aa22.63■■□□□ 1.21
VSX1-202ENST00000376709 NAP1L4Q99733 375 aaKnown RBP22.63■■□□□ 1.21
VSX1-202ENST00000376709 PSME4Q14997 1843 aa22.63■■□□□ 1.21
VSX1-202ENST00000376709 ARFGEF1Q9Y6D6 1849 aa22.63■■□□□ 1.21
VSX1-202ENST00000376709 ATF5Q9Y2D1 282 aaPredicted RBP22.62■■□□□ 1.21
VSX1-202ENST00000376709 GNG11P61952 73 aa22.62■■□□□ 1.21
VSX1-202ENST00000376709 RBM26Q5T8P6 1007 aaKnown RBP22.62■■□□□ 1.21
VSX1-202ENST00000376709 RAD9BQ6WBX8 426 aa22.62■■□□□ 1.21
VSX1-202ENST00000376709 GMCL1P1Q8NEA9 526 aa22.62■■□□□ 1.21
VSX1-202ENST00000376709 ABHD10Q9NUJ1 306 aa22.62■■□□□ 1.21
VSX1-202ENST00000376709 PCDHA12Q9UN75 941 aa22.62■■□□□ 1.21
VSX1-202ENST00000376709 ZBTB12Q9Y330 459 aaPredicted RBP22.62■■□□□ 1.21
VSX1-202ENST00000376709 LGALS16A8MUM7 142 aa22.61■■□□□ 1.21
VSX1-202ENST00000376709 GH2P01242 217 aa22.61■■□□□ 1.21
VSX1-202ENST00000376709 GLIPR1L2Q4G1C9 344 aa22.61■■□□□ 1.21
VSX1-202ENST00000376709 RAD54LQ92698 747 aa22.61■■□□□ 1.21
VSX1-202ENST00000376709 HAS1Q92839 578 aa22.61■■□□□ 1.21
VSX1-202ENST00000376709 NUDT12Q9BQG2 462 aa22.61■■□□□ 1.21
VSX1-202ENST00000376709 TMOD2Q9NZR1 351 aa22.61■■□□□ 1.21
VSX1-202ENST00000376709 CLRN2A0PK11 232 aa22.6■■□□□ 1.21
VSX1-202ENST00000376709 SPDYE2BA6NHP3 402 aa22.6■■□□□ 1.21
VSX1-202ENST00000376709 MYMKA6NI61 221 aa22.6■■□□□ 1.21
VSX1-202ENST00000376709 ZBTB7AO95365 584 aa22.6■■□□□ 1.21
VSX1-202ENST00000376709 VIL1P09327 827 aaKnown RBP22.6■■□□□ 1.21
VSX1-202ENST00000376709 SPDYE6P0CI01 402 aa22.6■■□□□ 1.21
VSX1-202ENST00000376709 PRKCSHP14314 528 aaPredicted RBP22.6■■□□□ 1.21
VSX1-202ENST00000376709 ANKRD40Q6AI12 368 aa22.6■■□□□ 1.21
VSX1-202ENST00000376709 DYMQ7RTS9 669 aa22.6■■□□□ 1.21
VSX1-202ENST00000376709 HPS3Q969F9 1004 aa22.6■■□□□ 1.21
VSX1-202ENST00000376709 GJA10Q969M2 543 aa22.6■■□□□ 1.21
VSX1-202ENST00000376709 EEF2KMTQ96G04 330 aa22.6■■□□□ 1.21
VSX1-202ENST00000376709 DUSP9Q99956 384 aaKnown RBP22.6■■□□□ 1.21
VSX1-202ENST00000376709 SLC39A2Q9NP94 309 aa22.6■■□□□ 1.21
VSX1-202ENST00000376709 TCP10L2B9ZVM9 353 aa22.6■■□□□ 1.21
VSX1-202ENST00000376709 URI1O94763 535 aaPredicted RBP22.6■■□□□ 1.21
VSX1-202ENST00000376709 NDUFB10O96000 172 aa22.6■■□□□ 1.21
VSX1-202ENST00000376709 UNC13DQ70J99 1090 aa22.6■■□□□ 1.21
VSX1-202ENST00000376709 FAM114A1Q8IWE2 563 aa22.6■■□□□ 1.21
VSX1-202ENST00000376709 MB21D1Q8N884 522 aa22.6■■□□□ 1.21
VSX1-202ENST00000376709 KIAA0895Q8NCT3 520 aa22.6■■□□□ 1.21
VSX1-202ENST00000376709 GMCL1Q96IK5 515 aa22.6■■□□□ 1.21
VSX1-202ENST00000376709 GMLQ99445 158 aa22.6■■□□□ 1.21
VSX1-202ENST00000376709 AMNQ9BXJ7 453 aa22.6■■□□□ 1.21
VSX1-202ENST00000376709 ANO3Q9BYT9 981 aa22.6■■□□□ 1.21
VSX1-202ENST00000376709 LRRC27Q9C0I9 530 aa22.6■■□□□ 1.21
VSX1-202ENST00000376709 PVALEFA0A1B0GWK0 134 aa22.59■■□□□ 1.21
VSX1-202ENST00000376709 FANCGO15287 622 aa22.59■■□□□ 1.21
VSX1-202ENST00000376709 TUBGCP2Q9BSJ2 902 aa22.59■■□□□ 1.21
VSX1-202ENST00000376709 ADGRG1Q9Y653 693 aa22.59■■□□□ 1.21
VSX1-202ENST00000376709 CASQ1P31415 396 aa22.59■■□□□ 1.21
VSX1-202ENST00000376709 KRT9P35527 623 aa22.59■■□□□ 1.21
VSX1-202ENST00000376709 JAG1P78504 1218 aa22.59■■□□□ 1.21
VSX1-202ENST00000376709 TMEM119Q4V9L6 283 aa22.59■■□□□ 1.21
VSX1-202ENST00000376709 TMTC1Q8IUR5 882 aa22.59■■□□□ 1.21
VSX1-202ENST00000376709 MRPL44Q9H9J2 332 aaKnown RBP22.59■■□□□ 1.21
VSX1-202ENST00000376709 IDEP14735 1019 aa22.58■■□□□ 1.21
VSX1-202ENST00000376709 USP11P51784 963 aa22.58■■□□□ 1.21
VSX1-202ENST00000376709 SNAP25P60880 206 aa22.58■■□□□ 1.21
VSX1-202ENST00000376709 USH1GQ495M9 461 aa22.58■■□□□ 1.21
VSX1-202ENST00000376709 COBLL1Q53SF7 1204 aa22.58■■□□□ 1.21
VSX1-202ENST00000376709 WDR24Q96S15 920 aa22.58■■□□□ 1.21
VSX1-202ENST00000376709 LZTFL1Q9NQ48 299 aa22.58■■□□□ 1.21
VSX1-202ENST00000376709 CGNQ9P2M7 1197 aaKnown RBP22.58■■□□□ 1.21
VSX1-202ENST00000376709 A0A1W2PQC6 194 aa22.57■■□□□ 1.2
VSX1-202ENST00000376709 RNF225M0QZC1 329 aaPredicted RBP22.57■■□□□ 1.2
VSX1-202ENST00000376709 FECHP22830 423 aa22.57■■□□□ 1.2
VSX1-202ENST00000376709 DNM2P50570 870 aa22.57■■□□□ 1.2
VSX1-202ENST00000376709 AP3B2Q13367 1082 aa22.57■■□□□ 1.2
VSX1-202ENST00000376709 RRP1BQ14684 758 aaKnown RBP22.57■■□□□ 1.2
VSX1-202ENST00000376709 DLGAP5Q15398 846 aa22.57■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms