RNA–Protein interactions for RNA: ENST00000376659.9

TRIM39-202, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM39, Length 3,535 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-202ENST00000376659 NDUFA10O95299 355 aa10.76□□□□□ -0.69
TRIM39-202ENST00000376659 NAPAP54920 295 aa10.76□□□□□ -0.69
TRIM39-202ENST00000376659 TERF2Q15554 542 aa10.76□□□□□ -0.69
TRIM39-202ENST00000376659 NOC3LQ8WTT2 800 aaKnown RBP10.76□□□□□ -0.69
TRIM39-202ENST00000376659 RAD54LQ92698 747 aa10.76□□□□□ -0.69
TRIM39-202ENST00000376659 MRIQ9BWK5 157 aa10.76□□□□□ -0.69
TRIM39-202ENST00000376659 AGPAT5Q9NUQ2 364 aa10.76□□□□□ -0.69
TRIM39-202ENST00000376659 FAM198AQ9UFP1 575 aa10.76□□□□□ -0.69
TRIM39-202ENST00000376659 STX8Q9UNK0 236 aa10.76□□□□□ -0.69
TRIM39-202ENST00000376659 ATP8B1O43520 1251 aa10.76□□□□□ -0.69
TRIM39-202ENST00000376659 SEC31AO94979 1220 aaKnown RBP10.76□□□□□ -0.69
TRIM39-202ENST00000376659 JAG1P78504 1218 aa10.76□□□□□ -0.69
TRIM39-202ENST00000376659 SRGAP1Q7Z6B7 1085 aa10.76□□□□□ -0.69
TRIM39-202ENST00000376659 SLC35F6Q8N357 371 aa10.76□□□□□ -0.69
TRIM39-202ENST00000376659 BAP1Q92560 729 aa10.76□□□□□ -0.69
TRIM39-202ENST00000376659 SWAP70Q9UH65 585 aa10.76□□□□□ -0.69
TRIM39-202ENST00000376659 NPM3O75607 178 aaKnown RBP10.75□□□□□ -0.69
TRIM39-202ENST00000376659 MARSP56192 900 aaKnown RBP10.75□□□□□ -0.69
TRIM39-202ENST00000376659 NFIAQ12857 509 aa10.75□□□□□ -0.69
TRIM39-202ENST00000376659 PAPD7Q5XG87 772 aaKnown RBP10.75□□□□□ -0.69
TRIM39-202ENST00000376659 REXO1Q8N1G1 1221 aaKnown RBP10.75□□□□□ -0.69
TRIM39-202ENST00000376659 ZDHHC15Q96MV8 337 aa10.75□□□□□ -0.69
TRIM39-202ENST00000376659 UBA5Q9GZZ9 404 aa10.75□□□□□ -0.69
TRIM39-202ENST00000376659 BIN2Q9UBW5 565 aaPredicted RBP10.75□□□□□ -0.69
TRIM39-202ENST00000376659 STK17AQ9UEE5 414 aa10.75□□□□□ -0.69
TRIM39-202ENST00000376659 CDC23Q9UJX2 597 aa10.75□□□□□ -0.69
TRIM39-202ENST00000376659 MYH11P35749 1972 aa10.75□□□□□ -0.69
TRIM39-202ENST00000376659 A0A0G2JMZ2 1700 aa10.75□□□□□ -0.69
TRIM39-202ENST00000376659 LRRC37A2A6NM11 1700 aa10.75□□□□□ -0.69
TRIM39-202ENST00000376659 PNMA6FA0A0J9YX94 578 aa10.75□□□□□ -0.69
TRIM39-202ENST00000376659 B4DLN1 442 aa10.75□□□□□ -0.69
TRIM39-202ENST00000376659 URI1O94763 535 aaPredicted RBP10.75□□□□□ -0.69
TRIM39-202ENST00000376659 TXLNAP40222 546 aa10.75□□□□□ -0.69
TRIM39-202ENST00000376659 UNC13DQ70J99 1090 aa10.75□□□□□ -0.69
TRIM39-202ENST00000376659 KRT222Q8N1A0 295 aa10.75□□□□□ -0.69
TRIM39-202ENST00000376659 ETNPPLQ8TBG4 499 aa10.75□□□□□ -0.69
TRIM39-202ENST00000376659 C7orf43Q8WVR3 580 aa10.75□□□□□ -0.69
TRIM39-202ENST00000376659 COA7Q96BR5 231 aa10.75□□□□□ -0.69
TRIM39-202ENST00000376659 PARD6BQ9BYG5 372 aa10.75□□□□□ -0.69
TRIM39-202ENST00000376659 ZNF287Q9HBT7 754 aa10.75□□□□□ -0.69
TRIM39-202ENST00000376659 C6orf50Q9HD87 102 aa10.75□□□□□ -0.69
TRIM39-202ENST00000376659 KCNQ5Q9NR82 932 aa10.75□□□□□ -0.69
TRIM39-202ENST00000376659 PVALEFA0A1B0GWK0 134 aa10.75□□□□□ -0.69
TRIM39-202ENST00000376659 GNA11P29992 359 aa10.75□□□□□ -0.69
TRIM39-202ENST00000376659 TECP42680 631 aa10.75□□□□□ -0.69
TRIM39-202ENST00000376659 LETM2Q2VYF4 491 aa10.75□□□□□ -0.69
TRIM39-202ENST00000376659 TTBK2Q6IQ55 1244 aa10.75□□□□□ -0.69
TRIM39-202ENST00000376659 LRRC47Q8N1G4 583 aaKnown RBP10.75□□□□□ -0.69
TRIM39-202ENST00000376659 CNOT6LQ96LI5 555 aaKnown RBP10.75□□□□□ -0.69
TRIM39-202ENST00000376659 IDI2Q9BXS1 227 aa10.75□□□□□ -0.69
TRIM39-202ENST00000376659 LZTFL1Q9NQ48 299 aa10.75□□□□□ -0.69
TRIM39-202ENST00000376659 TFR2Q9UP52 801 aa10.75□□□□□ -0.69
TRIM39-202ENST00000376659 TTLL1O95922 423 aa10.74□□□□□ -0.69
TRIM39-202ENST00000376659 BEND6Q5SZJ8 279 aaPredicted RBP10.74□□□□□ -0.69
TRIM39-202ENST00000376659 DPP8Q6V1X1 898 aaPredicted RBP10.74□□□□□ -0.69
TRIM39-202ENST00000376659 HOMER1Q86YM7 354 aa10.74□□□□□ -0.69
TRIM39-202ENST00000376659 CCDC12Q8WUD4 166 aaPredicted RBP10.74□□□□□ -0.69
TRIM39-202ENST00000376659 PLIN2Q99541 437 aa10.74□□□□□ -0.69
TRIM39-202ENST00000376659 COL11A1P12107 1806 aaPredicted RBP10.74□□□□□ -0.69
TRIM39-202ENST00000376659 MEIS2O14770 477 aa10.74□□□□□ -0.69
TRIM39-202ENST00000376659 N4BP3O15049 544 aa10.74□□□□□ -0.69
TRIM39-202ENST00000376659 NOL4O94818 638 aa10.74□□□□□ -0.69
TRIM39-202ENST00000376659 RRP1BQ14684 758 aaKnown RBP10.74□□□□□ -0.69
TRIM39-202ENST00000376659 HGSNATQ68CP4 663 aa10.74□□□□□ -0.69
TRIM39-202ENST00000376659 CCDC34Q96HJ3 373 aa10.74□□□□□ -0.69
TRIM39-202ENST00000376659 TUBGCP2Q9BSJ2 902 aa10.74□□□□□ -0.69
TRIM39-202ENST00000376659 KCTD10Q9H3F6 313 aa10.74□□□□□ -0.69
TRIM39-202ENST00000376659 EXOC1Q9NV70 894 aa10.74□□□□□ -0.69
TRIM39-202ENST00000376659 TRPC5Q9UL62 973 aaPredicted RBP10.74□□□□□ -0.69
TRIM39-202ENST00000376659 NENFQ9UMX5 172 aa10.74□□□□□ -0.69
TRIM39-202ENST00000376659 POTEMA6NI47 508 aa10.74□□□□□ -0.69
TRIM39-202ENST00000376659 RBAK-RBAKDNI3L0D1 243 aa10.74□□□□□ -0.69
TRIM39-202ENST00000376659 NRDCO43847 1150 aa10.74□□□□□ -0.69
TRIM39-202ENST00000376659 HOXD13P35453 343 aa10.74□□□□□ -0.69
TRIM39-202ENST00000376659 GTF2IP78347 998 aa10.74□□□□□ -0.69
TRIM39-202ENST00000376659 UBXN1Q04323 297 aa10.74□□□□□ -0.69
TRIM39-202ENST00000376659 COL23A1Q86Y22 540 aaPredicted RBP10.74□□□□□ -0.69
TRIM39-202ENST00000376659 LACRTQ9GZZ8 138 aa10.74□□□□□ -0.69
TRIM39-202ENST00000376659 SLC26A4O43511 780 aa10.73□□□□□ -0.69
TRIM39-202ENST00000376659 ZBTB48P10074 688 aaPredicted RBP10.73□□□□□ -0.69
TRIM39-202ENST00000376659 HOXA7P31268 230 aaPredicted RBP10.73□□□□□ -0.69
TRIM39-202ENST00000376659 DNM2P50570 870 aa10.73□□□□□ -0.69
TRIM39-202ENST00000376659 ADCY7P51828 1080 aa10.73□□□□□ -0.69
TRIM39-202ENST00000376659 KCNMA1Q12791 1236 aa10.73□□□□□ -0.69
TRIM39-202ENST00000376659 TUBB2AQ13885 445 aa10.73□□□□□ -0.69
TRIM39-202ENST00000376659 ARSHQ5FYA8 562 aa10.73□□□□□ -0.69
TRIM39-202ENST00000376659 DACT2Q5SW24 774 aa10.73□□□□□ -0.69
TRIM39-202ENST00000376659 PPFIBP1Q86W92 1011 aa10.73□□□□□ -0.69
TRIM39-202ENST00000376659 GUF1Q8N442 669 aaKnown RBP10.73□□□□□ -0.69
TRIM39-202ENST00000376659 RETREG2Q8NC44 543 aa10.73□□□□□ -0.69
TRIM39-202ENST00000376659 TUBB2BQ9BVA1 445 aa10.73□□□□□ -0.69
TRIM39-202ENST00000376659 DOCK1Q14185 1865 aa10.73□□□□□ -0.69
TRIM39-202ENST00000376659 EIF3CLB5ME19 914 aaKnown RBP10.73□□□□□ -0.69
TRIM39-202ENST00000376659 KRT9P35527 623 aa10.73□□□□□ -0.69
TRIM39-202ENST00000376659 MCM6Q14566 821 aa10.73□□□□□ -0.69
TRIM39-202ENST00000376659 UBE2SQ16763 222 aa10.73□□□□□ -0.69
TRIM39-202ENST00000376659 EPM2AIP1Q7L775 607 aaPredicted RBP10.73□□□□□ -0.69
TRIM39-202ENST00000376659 SLF2Q8IX21 1173 aa10.73□□□□□ -0.69
TRIM39-202ENST00000376659 CPLX3Q8WVH0 158 aa10.73□□□□□ -0.69
TRIM39-202ENST00000376659 EIF3CQ99613 913 aaKnown RBP10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms