RNA–Protein interactions for RNA: ENST00000376395.8

UBQLN1-202, Transcript of ubiquilin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBQLN1, Length 4,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1-202ENST00000376395 MEIS1O00470 390 aa16.34■□□□□ 0.21
UBQLN1-202ENST00000376395 TBX2Q13207 712 aaPredicted RBP16.34■□□□□ 0.21
UBQLN1-202ENST00000376395 DAAM2Q86T65 1068 aa16.34■□□□□ 0.21
UBQLN1-202ENST00000376395 ZNF622Q969S3 477 aaKnown RBP eCLIP16.34■□□□□ 0.21
UBQLN1-202ENST00000376395 ANKRD62A6NC57 917 aa16.33■□□□□ 0.21
UBQLN1-202ENST00000376395 RNF225M0QZC1 329 aaPredicted RBP16.33■□□□□ 0.21
UBQLN1-202ENST00000376395 SEMA3EO15041 775 aa16.33■□□□□ 0.21
UBQLN1-202ENST00000376395 PKN1Q16512 942 aa16.33■□□□□ 0.21
UBQLN1-202ENST00000376395 FAM26FQ5R3K3 315 aa16.33■□□□□ 0.21
UBQLN1-202ENST00000376395 CCDC155Q8N6L0 562 aa16.33■□□□□ 0.21
UBQLN1-202ENST00000376395 LIMA1Q9UHB6 759 aaKnown RBP16.33■□□□□ 0.21
UBQLN1-202ENST00000376395 GCOM1H8Y6P7 765 aaPredicted RBP16.33■□□□□ 0.2
UBQLN1-202ENST00000376395 FAM13AO94988 1023 aa16.33■□□□□ 0.2
UBQLN1-202ENST00000376395 MYZAPP0CAP1 466 aa16.33■□□□□ 0.2
UBQLN1-202ENST00000376395 SCNN1DP51172 638 aa16.33■□□□□ 0.2
UBQLN1-202ENST00000376395 CLEC10AQ8IUN9 316 aa16.33■□□□□ 0.2
UBQLN1-202ENST00000376395 TMEM47Q9BQJ4 181 aa16.33■□□□□ 0.2
UBQLN1-202ENST00000376395 TAOK3Q9H2K8 898 aa16.33■□□□□ 0.2
UBQLN1-202ENST00000376395 PANK4Q9NVE7 773 aa16.33■□□□□ 0.2
UBQLN1-202ENST00000376395 L1RE1Q9UN81 338 aa16.33■□□□□ 0.2
UBQLN1-202ENST00000376395 JRKLQ9Y4A0 524 aa16.33■□□□□ 0.2
UBQLN1-202ENST00000376395 GTF2IP78347 998 aa16.33■□□□□ 0.2
UBQLN1-202ENST00000376395 DPP8Q6V1X1 898 aaPredicted RBP16.33■□□□□ 0.2
UBQLN1-202ENST00000376395 LMBR1Q8WVP7 490 aa16.33■□□□□ 0.2
UBQLN1-202ENST00000376395 PAIP2Q9BPZ3 127 aaKnown RBP16.33■□□□□ 0.2
UBQLN1-202ENST00000376395 ARHGAP44Q17R89 818 aa16.32■□□□□ 0.2
UBQLN1-202ENST00000376395 SRLQ86TD4 932 aa16.32■□□□□ 0.2
UBQLN1-202ENST00000376395 AP1M1Q9BXS5 423 aa16.32■□□□□ 0.2
UBQLN1-202ENST00000376395 THAP9Q9H5L6 903 aa16.32■□□□□ 0.2
UBQLN1-202ENST00000376395 PLCG2P16885 1265 aa16.32■□□□□ 0.2
UBQLN1-202ENST00000376395 SARSP49591 514 aaKnown RBP16.32■□□□□ 0.2
UBQLN1-202ENST00000376395 ADAM9Q13443 819 aa16.32■□□□□ 0.2
UBQLN1-202ENST00000376395 EZH2Q15910 746 aaKnown RBP16.32■□□□□ 0.2
UBQLN1-202ENST00000376395 B4GALNT4Q76KP1 1039 aa16.32■□□□□ 0.2
UBQLN1-202ENST00000376395 HS2ST1Q7LGA3 356 aa16.32■□□□□ 0.2
UBQLN1-202ENST00000376395 PEX26Q7Z412 305 aa16.32■□□□□ 0.2
UBQLN1-202ENST00000376395 POTEDQ86YR6 584 aa16.32■□□□□ 0.2
UBQLN1-202ENST00000376395 TMEM139Q8IV31 216 aa16.32■□□□□ 0.2
UBQLN1-202ENST00000376395 BRIP1Q9BX63 1249 aa16.32■□□□□ 0.2
UBQLN1-202ENST00000376395 ZC3H12CQ9C0D7 883 aaKnown RBP16.32■□□□□ 0.2
UBQLN1-202ENST00000376395 GJC1P36383 396 aa16.32■□□□□ 0.2
UBQLN1-202ENST00000376395 KRT71Q3SY84 523 aa16.32■□□□□ 0.2
UBQLN1-202ENST00000376395 ARL6IP4Q66PJ3 421 aaKnown RBP16.32■□□□□ 0.2
UBQLN1-202ENST00000376395 KCTD1Q719H9 257 aa16.32■□□□□ 0.2
UBQLN1-202ENST00000376395 ADSSL1Q8N142 457 aa16.32■□□□□ 0.2
UBQLN1-202ENST00000376395 U2AF1L4Q8WU68 220 aaKnown RBP16.32■□□□□ 0.2
UBQLN1-202ENST00000376395 PNPLA7Q6ZV29 1317 aa16.32■□□□□ 0.2
UBQLN1-202ENST00000376395 CNBD1Q8NA66 436 aa16.31■□□□□ 0.2
UBQLN1-202ENST00000376395 COG1Q8WTW3 980 aa16.31■□□□□ 0.2
UBQLN1-202ENST00000376395 RGPD8O14715 1765 aaPredicted RBP16.31■□□□□ 0.2
UBQLN1-202ENST00000376395 CTNNA1P35221 906 aaKnown RBP16.31■□□□□ 0.2
UBQLN1-202ENST00000376395 PABPC4Q13310 644 aaKnown RBP eCLIP16.31■□□□□ 0.28e-10■■□□□ 13
UBQLN1-202ENST00000376395 PIK3C2AO00443 1686 aa16.31■□□□□ 0.2
UBQLN1-202ENST00000376395 BACH1O14867 736 aa16.31■□□□□ 0.2
UBQLN1-202ENST00000376395 GCNT3O95395 438 aa16.31■□□□□ 0.2
UBQLN1-202ENST00000376395 NNTQ13423 1086 aa16.31■□□□□ 0.2
UBQLN1-202ENST00000376395 TBC1D10BQ4KMP7 808 aaPredicted RBP16.31■□□□□ 0.2
UBQLN1-202ENST00000376395 FBXL16Q8N461 479 aa16.31■□□□□ 0.2
UBQLN1-202ENST00000376395 TMOD2Q9NZR1 351 aa16.31■□□□□ 0.2
UBQLN1-202ENST00000376395 IFT88Q13099 833 aa16.3■□□□□ 0.2
UBQLN1-202ENST00000376395 VWA3BQ502W6 1294 aa16.3■□□□□ 0.2
UBQLN1-202ENST00000376395 PRR16Q569H4 304 aa16.3■□□□□ 0.2
UBQLN1-202ENST00000376395 CABS1Q96KC9 395 aa16.3■□□□□ 0.2
UBQLN1-202ENST00000376395 FAM184BQ9ULE4 1060 aa16.3■□□□□ 0.2
UBQLN1-202ENST00000376395 SNAP25P60880 206 aa16.3■□□□□ 0.2
UBQLN1-202ENST00000376395 MAN2A1Q16706 1144 aa16.3■□□□□ 0.2
UBQLN1-202ENST00000376395 GOLPH3Q9H4A6 298 aa16.3■□□□□ 0.2
UBQLN1-202ENST00000376395 CCNL1Q9UK58 526 aaPredicted RBP16.3■□□□□ 0.2
UBQLN1-202ENST00000376395 CNTNAP5Q8WYK1 1306 aa16.3■□□□□ 0.2
UBQLN1-202ENST00000376395 PPFIA4O75335 1185 aa16.3■□□□□ 0.2
UBQLN1-202ENST00000376395 TDP2O95551 362 aa16.3■□□□□ 0.2
UBQLN1-202ENST00000376395 DDX12PQ92771 950 aa16.3■□□□□ 0.2
UBQLN1-202ENST00000376395 DDX25Q9UHL0 483 aaKnown RBP16.3■□□□□ 0.2
UBQLN1-202ENST00000376395 CAPN11Q9UMQ6 739 aa16.3■□□□□ 0.2
UBQLN1-202ENST00000376395 FAM205AQ6ZU69 1335 aa16.3■□□□□ 0.2
UBQLN1-202ENST00000376395 ZNF335Q9H4Z2 1342 aaPredicted RBP16.3■□□□□ 0.2
UBQLN1-202ENST00000376395 CLIC2O15247 247 aa16.3■□□□□ 0.2
UBQLN1-202ENST00000376395 ZYXQ15942 572 aaKnown RBP16.3■□□□□ 0.2
UBQLN1-202ENST00000376395 MARCH10Q8NA82 808 aaPredicted RBP16.3■□□□□ 0.2
UBQLN1-202ENST00000376395 NSUN4Q96CB9 384 aaKnown RBP16.3■□□□□ 0.2
UBQLN1-202ENST00000376395 KRIT1O00522 736 aa16.29■□□□□ 0.2
UBQLN1-202ENST00000376395 VIMP08670 466 aaKnown RBP16.29■□□□□ 0.2
UBQLN1-202ENST00000376395 SLC1A4P43007 532 aa16.29■□□□□ 0.2
UBQLN1-202ENST00000376395 CDKAL1Q5VV42 579 aa16.29■□□□□ 0.2
UBQLN1-202ENST00000376395 CCDC170Q8IYT3 715 aa16.29■□□□□ 0.2
UBQLN1-202ENST00000376395 ZNF34Q8IZ26 560 aa16.29■□□□□ 0.2
UBQLN1-202ENST00000376395 SPATA4Q8NEY3 305 aa16.29■□□□□ 0.2
UBQLN1-202ENST00000376395 JCADQ9P266 1359 aa16.29■□□□□ 0.2
UBQLN1-202ENST00000376395 USP17L5A8MUK1 530 aa16.29■□□□□ 0.2
UBQLN1-202ENST00000376395 PALMO75781 387 aa16.29■□□□□ 0.2
UBQLN1-202ENST00000376395 IRX3P78415 501 aaPredicted RBP16.29■□□□□ 0.2
UBQLN1-202ENST00000376395 SEC23AQ15436 765 aa16.29■□□□□ 0.2
UBQLN1-202ENST00000376395 OSBPL9Q96SU4 736 aa16.29■□□□□ 0.2
UBQLN1-202ENST00000376395 TRIM9Q9C026 710 aa16.29■□□□□ 0.2
UBQLN1-202ENST00000376395 DDX39AO00148 427 aaKnown RBP16.29■□□□□ 0.2
UBQLN1-202ENST00000376395 KRT14P02533 472 aa16.29■□□□□ 0.2
UBQLN1-202ENST00000376395 EPB41P11171 864 aaKnown RBP16.29■□□□□ 0.2
UBQLN1-202ENST00000376395 RPL13P26373 211 aaKnown RBP16.29■□□□□ 0.2
UBQLN1-202ENST00000376395 STXBP4Q6ZWJ1 553 aa16.29■□□□□ 0.2
UBQLN1-202ENST00000376395 DNAAF5Q86Y56 855 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms