RNA–Protein interactions for RNA: ENST00000376057.8

PDPN-202, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PDPN, Length 2,801 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-202ENST00000376057 CDCA5Q96FF9 252 aa12.57□□□□□ -0.4
PDPN-202ENST00000376057 P2RX7Q99572 595 aaKnown RBP12.57□□□□□ -0.4
PDPN-202ENST00000376057 CBX8Q9HC52 389 aa12.57□□□□□ -0.4
PDPN-202ENST00000376057 TMOD4Q9NZQ9 345 aa12.57□□□□□ -0.4
PDPN-202ENST00000376057 IKBKBO14920 756 aa12.56□□□□□ -0.4
PDPN-202ENST00000376057 SLC37A4O43826 429 aa12.56□□□□□ -0.4
PDPN-202ENST00000376057 TDP2O95551 362 aa12.56□□□□□ -0.4
PDPN-202ENST00000376057 DPYDQ12882 1025 aa12.56□□□□□ -0.4
PDPN-202ENST00000376057 VGLL4Q14135 290 aa12.56□□□□□ -0.4
PDPN-202ENST00000376057 MORC3Q14149 939 aa12.56□□□□□ -0.4
PDPN-202ENST00000376057 COG2Q14746 738 aa12.56□□□□□ -0.4
PDPN-202ENST00000376057 USH1GQ495M9 461 aa12.56□□□□□ -0.4
PDPN-202ENST00000376057 LBX2Q6XYB7 198 aa12.56□□□□□ -0.4
PDPN-202ENST00000376057 ANKRD13AQ8IZ07 590 aa12.56□□□□□ -0.4
PDPN-202ENST00000376057 FBXO28Q9NVF7 368 aa12.56□□□□□ -0.4
PDPN-202ENST00000376057 HOXC10Q9NYD6 342 aa12.56□□□□□ -0.4
PDPN-202ENST00000376057 KCNH4Q9UQ05 1017 aa12.56□□□□□ -0.4
PDPN-202ENST00000376057 CSADQ9Y600 493 aa12.56□□□□□ -0.4
PDPN-202ENST00000376057 GTPBP6O43824 516 aaPredicted RBP12.56□□□□□ -0.4
PDPN-202ENST00000376057 UBA7P41226 1012 aa12.56□□□□□ -0.4
PDPN-202ENST00000376057 ZRSR1Q15695 479 aaKnown RBP12.56□□□□□ -0.4
PDPN-202ENST00000376057 ZYXQ15942 572 aaKnown RBP12.56□□□□□ -0.4
PDPN-202ENST00000376057 CCDC84Q86UT8 332 aaPredicted RBP12.56□□□□□ -0.4
PDPN-202ENST00000376057 ETNPPLQ8TBG4 499 aa12.56□□□□□ -0.4
PDPN-202ENST00000376057 KBTBD4Q9NVX7 518 aa12.56□□□□□ -0.4
PDPN-202ENST00000376057 STK17AQ9UEE5 414 aa12.56□□□□□ -0.4
PDPN-202ENST00000376057 PCDHA5Q9Y5H7 936 aa12.56□□□□□ -0.4
PDPN-202ENST00000376057 ADM5C9JUS6 153 aa12.55□□□□□ -0.4
PDPN-202ENST00000376057 SNAP25P60880 206 aa12.55□□□□□ -0.4
PDPN-202ENST00000376057 HS1BP3Q53T59 392 aa12.55□□□□□ -0.4
PDPN-202ENST00000376057 SARM1Q6SZW1 724 aa12.55□□□□□ -0.4
PDPN-202ENST00000376057 ERO1BQ86YB8 467 aa12.55□□□□□ -0.4
PDPN-202ENST00000376057 MLKLQ8NB16 471 aa12.55□□□□□ -0.4
PDPN-202ENST00000376057 LENG9Q96B70 501 aa12.55□□□□□ -0.4
PDPN-202ENST00000376057 DACH1Q9UI36 760 aa12.55□□□□□ -0.4
PDPN-202ENST00000376057 CCPG1Q9ULG6 757 aa12.55□□□□□ -0.4
PDPN-202ENST00000376057 A0A0G2JLL6 359 aaPredicted RBP12.55□□□□□ -0.4
PDPN-202ENST00000376057 SPDYE5A6NIY4 337 aa12.55□□□□□ -0.4
PDPN-202ENST00000376057 FLOT1O75955 427 aa12.55□□□□□ -0.4
PDPN-202ENST00000376057 BCRP11274 1271 aa12.55□□□□□ -0.4
PDPN-202ENST00000376057 PNOCQ13519 176 aa12.55□□□□□ -0.4
PDPN-202ENST00000376057 LDLRAD1Q5T700 205 aa12.55□□□□□ -0.4
PDPN-202ENST00000376057 PRAMEF18Q5VWM3 479 aa12.55□□□□□ -0.4
PDPN-202ENST00000376057 XRRA1Q6P2D8 792 aa12.55□□□□□ -0.4
PDPN-202ENST00000376057 CCDC174Q6PII3 467 aa12.55□□□□□ -0.4
PDPN-202ENST00000376057 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.55□□□□□ -0.4
PDPN-202ENST00000376057 PRRT2Q7Z6L0 340 aaPredicted RBP12.55□□□□□ -0.4
PDPN-202ENST00000376057 SMARCE1Q969G3 411 aa12.55□□□□□ -0.4
PDPN-202ENST00000376057 DHX58Q96C10 678 aa12.55□□□□□ -0.4
PDPN-202ENST00000376057 MMTAG2Q9BU76 263 aaKnown RBP12.55□□□□□ -0.4
PDPN-202ENST00000376057 PANK2Q9BZ23 570 aa12.55□□□□□ -0.4
PDPN-202ENST00000376057 TANGO6Q9C0B7 1094 aa12.55□□□□□ -0.4
PDPN-202ENST00000376057 COL11A1P12107 1806 aaPredicted RBP12.54□□□□□ -0.4
PDPN-202ENST00000376057 IRF6O14896 467 aa12.54□□□□□ -0.4
PDPN-202ENST00000376057 FKBP1BP68106 108 aa12.54□□□□□ -0.4
PDPN-202ENST00000376057 PPIL2Q13356 520 aa12.54□□□□□ -0.4
PDPN-202ENST00000376057 NAALADL2Q58DX5 795 aa12.54□□□□□ -0.4
PDPN-202ENST00000376057 CABP7Q86V35 215 aa12.54□□□□□ -0.4
PDPN-202ENST00000376057 MB21D1Q8N884 522 aa12.54□□□□□ -0.4
PDPN-202ENST00000376057 DNAJC25Q9H1X3 360 aa12.54□□□□□ -0.4
PDPN-202ENST00000376057 IGLV3-22A0A075B6J6 115 aa12.54□□□□□ -0.4
PDPN-202ENST00000376057 SMTNL1A8MU46 457 aa12.54□□□□□ -0.4
PDPN-202ENST00000376057 MUTP22033 750 aa12.54□□□□□ -0.4
PDPN-202ENST00000376057 SETQ01105 290 aaPredicted RBP12.54□□□□□ -0.4
PDPN-202ENST00000376057 RRAGBQ5VZM2 374 aa12.54□□□□□ -0.4
PDPN-202ENST00000376057 DHX40Q8IX18 779 aaKnown RBP12.54□□□□□ -0.4
PDPN-202ENST00000376057 LRWD1Q9UFC0 647 aa12.54□□□□□ -0.4
PDPN-202ENST00000376057 MAN1B1Q9UKM7 699 aa12.54□□□□□ -0.4
PDPN-202ENST00000376057 KDM3AQ9Y4C1 1321 aa12.53□□□□□ -0.4
PDPN-202ENST00000376057 KCNB1Q14721 858 aa12.53□□□□□ -0.4
PDPN-202ENST00000376057 TMEM119Q4V9L6 283 aa12.53□□□□□ -0.4
PDPN-202ENST00000376057 C11orf57Q6ZUT1 292 aaPredicted RBP12.53□□□□□ -0.4
PDPN-202ENST00000376057 ARMC9Q7Z3E5 817 aa12.53□□□□□ -0.4
PDPN-202ENST00000376057 CALML4Q96GE6 196 aa12.53□□□□□ -0.4
PDPN-202ENST00000376057 AGBL1Q96MI9 1066 aa12.53□□□□□ -0.4
PDPN-202ENST00000376057 LRRC27Q9C0I9 530 aa12.53□□□□□ -0.4
PDPN-202ENST00000376057 TTC12Q9H892 705 aaPredicted RBP12.53□□□□□ -0.4
PDPN-202ENST00000376057 RMND1Q9NWS8 449 aa12.53□□□□□ -0.4
PDPN-202ENST00000376057 ERCC5P28715 1186 aaPredicted RBP12.53□□□□□ -0.4
PDPN-202ENST00000376057 STAT6P42226 847 aa12.53□□□□□ -0.4
PDPN-202ENST00000376057 TECP42680 631 aa12.53□□□□□ -0.4
PDPN-202ENST00000376057 HMGCS2P54868 508 aa12.53□□□□□ -0.4
PDPN-202ENST00000376057 RNF214Q8ND24 703 aa12.53□□□□□ -0.4
PDPN-202ENST00000376057 C7orf25Q9BPX7 421 aa12.53□□□□□ -0.4
PDPN-202ENST00000376057 PCDHA12Q9UN75 941 aa12.53□□□□□ -0.4
PDPN-202ENST00000376057 TXKP42681 527 aa12.52□□□□□ -0.4
PDPN-202ENST00000376057 SPIRE1Q08AE8 756 aa12.52□□□□□ -0.4
PDPN-202ENST00000376057 COBLL1Q53SF7 1204 aa12.52□□□□□ -0.4
PDPN-202ENST00000376057 NT5C3AQ9H0P0 336 aa12.52□□□□□ -0.4
PDPN-202ENST00000376057 AMPD3Q01432 767 aa12.52□□□□□ -0.41
PDPN-202ENST00000376057 DPCR1Q3MIW9 517 aa12.52□□□□□ -0.41
PDPN-202ENST00000376057 PCNX4Q63HM2 1172 aa12.52□□□□□ -0.41
PDPN-202ENST00000376057 SLC5A5Q92911 643 aa12.52□□□□□ -0.41
PDPN-202ENST00000376057 MTRQ99707 1265 aa12.52□□□□□ -0.41
PDPN-202ENST00000376057 ZNF214Q9UL59 606 aaPredicted RBP12.52□□□□□ -0.41
PDPN-202ENST00000376057 SMCHD1A6NHR9 2005 aa12.52□□□□□ -0.41
PDPN-202ENST00000376057 FAM86B1E9PN63 330 aa12.52□□□□□ -0.41
PDPN-202ENST00000376057 MEIS1O00470 390 aa12.52□□□□□ -0.41
PDPN-202ENST00000376057 FOXN1O15353 648 aa12.52□□□□□ -0.41
PDPN-202ENST00000376057 CFBP00751 764 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms