RNA–Protein interactions for RNA: ENST00000375663.7

VARS-215, Transcript of valyl-tRNA synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-215ENST00000375663 GJA10Q969M2 543 aa18.45■□□□□ 0.54
VARS-215ENST00000375663 MRRFQ96E11 262 aaKnown RBP18.45■□□□□ 0.54
VARS-215ENST00000375663 MYOM1P52179 1685 aa18.45■□□□□ 0.54
VARS-215ENST00000375663 BTDP43251 543 aa18.45■□□□□ 0.54
VARS-215ENST00000375663 USP14P54578 494 aa18.45■□□□□ 0.54
VARS-215ENST00000375663 RAD9BQ6WBX8 426 aa18.45■□□□□ 0.54
VARS-215ENST00000375663 DYNLL2Q96FJ2 89 aa18.45■□□□□ 0.54
VARS-215ENST00000375663 PARP2Q9UGN5 583 aa18.45■□□□□ 0.54
VARS-215ENST00000375663 BZW2Q9Y6E2 419 aaKnown RBP18.45■□□□□ 0.54
VARS-215ENST00000375663 CCDC169A6NNP5 214 aa18.44■□□□□ 0.54
VARS-215ENST00000375663 FXR1P51114 621 aaKnown RBP eCLIP18.44■□□□□ 0.544e-6■■■□□ 18
VARS-215ENST00000375663 BIRC3Q13489 604 aa18.44■□□□□ 0.54
VARS-215ENST00000375663 C8orf37Q96NL8 207 aa18.44■□□□□ 0.54
VARS-215ENST00000375663 BRIP1Q9BX63 1249 aa18.44■□□□□ 0.54
VARS-215ENST00000375663 HOMER3Q9NSC5 361 aa18.44■□□□□ 0.54
VARS-215ENST00000375663 NFU1Q9UMS0 254 aa18.44■□□□□ 0.54
VARS-215ENST00000375663 NEURL4Q96JN8 1562 aa18.44■□□□□ 0.54
VARS-215ENST00000375663 CFBP00751 764 aa18.44■□□□□ 0.54
VARS-215ENST00000375663 NR1I3Q14994 352 aa18.44■□□□□ 0.54
VARS-215ENST00000375663 ANKRD42Q8N9B4 389 aa18.44■□□□□ 0.54
VARS-215ENST00000375663 FAM133AQ8N9E0 248 aa18.44■□□□□ 0.54
VARS-215ENST00000375663 ADD3Q9UEY8 706 aaKnown RBP18.44■□□□□ 0.54
VARS-215ENST00000375663 ADAMTS1Q9UHI8 967 aa18.44■□□□□ 0.54
VARS-215ENST00000375663 DPP8Q6V1X1 898 aaPredicted RBP18.44■□□□□ 0.54
VARS-215ENST00000375663 EFCC1Q9HA90 598 aa18.44■□□□□ 0.54
VARS-215ENST00000375663 HPS5Q9UPZ3 1129 aa18.44■□□□□ 0.54
VARS-215ENST00000375663 ZBTB22O15209 634 aa18.43■□□□□ 0.54
VARS-215ENST00000375663 NR1D1P20393 614 aa18.43■□□□□ 0.54
VARS-215ENST00000375663 TRIM28Q13263 835 aaKnown RBP18.43■□□□□ 0.54
VARS-215ENST00000375663 PDCLQ13371 301 aa18.43■□□□□ 0.54
VARS-215ENST00000375663 E2F4Q16254 413 aa18.43■□□□□ 0.54
VARS-215ENST00000375663 USP17L2Q6R6M4 530 aa18.43■□□□□ 0.54
VARS-215ENST00000375663 REXO1L1PQ8IX06 675 aa18.43■□□□□ 0.54
VARS-215ENST00000375663 OGFOD1Q8N543 542 aa18.43■□□□□ 0.54
VARS-215ENST00000375663 CHP1Q99653 195 aa18.43■□□□□ 0.54
VARS-215ENST00000375663 RIPOR2Q9Y4F9 1068 aa18.43■□□□□ 0.54
VARS-215ENST00000375663 FAM205CA6NFA0 338 aa18.43■□□□□ 0.54
VARS-215ENST00000375663 UBAP1LF5GYI3 381 aa18.43■□□□□ 0.54
VARS-215ENST00000375663 IRX5P78411 483 aaPredicted RBP18.43■□□□□ 0.54
VARS-215ENST00000375663 CACNB1Q02641 598 aaPredicted RBP18.43■□□□□ 0.54
VARS-215ENST00000375663 TCP10Q12799 353 aa18.43■□□□□ 0.54
VARS-215ENST00000375663 PFKFB3Q16875 520 aaPredicted RBP18.43■□□□□ 0.54
VARS-215ENST00000375663 PIGSQ96S52 555 aa18.43■□□□□ 0.54
VARS-215ENST00000375663 USP17L3A6NCW0 530 aa18.43■□□□□ 0.54
VARS-215ENST00000375663 USP17L4A6NCW7 530 aa18.43■□□□□ 0.54
VARS-215ENST00000375663 PGRMC1O00264 195 aaKnown RBP18.43■□□□□ 0.54
VARS-215ENST00000375663 H2AFXP16104 143 aaPredicted RBP18.43■□□□□ 0.54
VARS-215ENST00000375663 GTF2IP78347 998 aa18.43■□□□□ 0.54
VARS-215ENST00000375663 CYP4A11Q02928 519 aa18.43■□□□□ 0.54
VARS-215ENST00000375663 USP17L1Q7RTZ2 530 aa18.43■□□□□ 0.54
VARS-215ENST00000375663 SENP2Q9HC62 589 aa18.43■□□□□ 0.54
VARS-215ENST00000375663 FRMPD1Q5SYB0 1578 aa18.43■□□□□ 0.54
VARS-215ENST00000375663 DGKHQ86XP1 1220 aa18.42■□□□□ 0.54
VARS-215ENST00000375663 GAS8O95995 478 aa18.42■□□□□ 0.54
VARS-215ENST00000375663 MECOMQ03112 1051 aa18.42■□□□□ 0.54
VARS-215ENST00000375663 TADA2BQ86TJ2 420 aa18.42■□□□□ 0.54
VARS-215ENST00000375663 MYCBPQ99417 103 aaPredicted RBP18.42■□□□□ 0.54
VARS-215ENST00000375663 EPB41L3Q9Y2J2 1087 aaPredicted RBP18.42■□□□□ 0.54
VARS-215ENST00000375663 MROH2AA6NES4 1674 aa18.42■□□□□ 0.54
VARS-215ENST00000375663 DDX39AO00148 427 aaKnown RBP18.42■□□□□ 0.54
VARS-215ENST00000375663 SP4Q02446 784 aa18.42■□□□□ 0.54
VARS-215ENST00000375663 RASGRP2Q7LDG7 609 aa18.42■□□□□ 0.54
VARS-215ENST00000375663 COG1Q8WTW3 980 aa18.42■□□□□ 0.54
VARS-215ENST00000375663 FNBP1Q96RU3 617 aa18.42■□□□□ 0.54
VARS-215ENST00000375663 ATP1A1P05023 1023 aaKnown RBP18.42■□□□□ 0.54
VARS-215ENST00000375663 ATP2C1P98194 919 aaPredicted RBP18.42■□□□□ 0.54
VARS-215ENST00000375663 LRRC63Q05C16 580 aa18.42■□□□□ 0.54
VARS-215ENST00000375663 PABPC4Q13310 644 aaKnown RBP eCLIP18.42■□□□□ 0.545e-7■■□□□ 13.2
VARS-215ENST00000375663 WDR44Q5JSH3 913 aa18.42■□□□□ 0.54
VARS-215ENST00000375663 SERPING1P05155 500 aa18.41■□□□□ 0.54
VARS-215ENST00000375663 WHAMMQ8TF30 809 aa18.41■□□□□ 0.54
VARS-215ENST00000375663 SMC6Q96SB8 1091 aa18.41■□□□□ 0.54
VARS-215ENST00000375663 VEZTQ9HBM0 779 aa18.41■□□□□ 0.54
VARS-215ENST00000375663 CDHR2Q9BYE9 1310 aa18.41■□□□□ 0.54
VARS-215ENST00000375663 NMT2O60551 498 aa18.41■□□□□ 0.54
VARS-215ENST00000375663 SMTNP53814 917 aa18.41■□□□□ 0.54
VARS-215ENST00000375663 COA7Q96BR5 231 aa18.41■□□□□ 0.54
VARS-215ENST00000375663 MLXIPQ9HAP2 919 aa18.41■□□□□ 0.54
VARS-215ENST00000375663 VWDEQ8N2E2 1590 aa18.41■□□□□ 0.54
VARS-215ENST00000375663 DIP2CQ9Y2E4 1556 aa18.41■□□□□ 0.54
VARS-215ENST00000375663 PP2D1A8MPX8 630 aa18.41■□□□□ 0.54
VARS-215ENST00000375663 PCK1P35558 622 aa18.41■□□□□ 0.54
VARS-215ENST00000375663 PLA2G4AP47712 749 aa18.41■□□□□ 0.54
VARS-215ENST00000375663 SLFN12Q8IYM2 578 aa18.41■□□□□ 0.54
VARS-215ENST00000375663 PCDHA1Q9Y5I3 950 aa18.41■□□□□ 0.54
VARS-215ENST00000375663 FAM169AQ9Y6X4 670 aa18.41■□□□□ 0.54
VARS-215ENST00000375663 CEP170BQ9Y4F5 1589 aaPredicted RBP18.41■□□□□ 0.54
VARS-215ENST00000375663 STX2P32856 288 aa18.4■□□□□ 0.54
VARS-215ENST00000375663 USP40Q9NVE5 1235 aa18.4■□□□□ 0.54
VARS-215ENST00000375663 ATP8A1Q9Y2Q0 1164 aa18.4■□□□□ 0.54
VARS-215ENST00000375663 CEP83Q9Y592 693 aa18.4■□□□□ 0.54
VARS-215ENST00000375663 NEBLO76041 1014 aa18.4■□□□□ 0.54
VARS-215ENST00000375663 CLTAP09496 248 aa18.4■□□□□ 0.54
VARS-215ENST00000375663 CYP2D6P10635 497 aa18.4■□□□□ 0.54
VARS-215ENST00000375663 IFNAR2P48551 515 aa18.4■□□□□ 0.54
VARS-215ENST00000375663 UAP1Q16222 522 aaPredicted RBP18.4■□□□□ 0.54
VARS-215ENST00000375663 FAM178BQ8IXR5 827 aa18.4■□□□□ 0.54
VARS-215ENST00000375663 FAM212AQ96EL1 285 aa18.4■□□□□ 0.54
VARS-215ENST00000375663 ATP2A2P16615 1042 aaKnown RBP18.4■□□□□ 0.54
VARS-215ENST00000375663 GRIN1Q05586 938 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms