RNA–Protein interactions for RNA: ENST00000375618.8

C11orf88-202, Transcript of chromosome 11 open reading frame 88, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C11orf88, Length 712 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-202ENST00000375618 PHKBQ93100 1093 aa18.44■□□□□ 0.54
C11orf88-202ENST00000375618 ALDH8A1Q9H2A2 487 aaPredicted RBP18.44■□□□□ 0.54
C11orf88-202ENST00000375618 C11orf49Q9H6J7 331 aa18.44■□□□□ 0.54
C11orf88-202ENST00000375618 VTA1Q9NP79 307 aa18.44■□□□□ 0.54
C11orf88-202ENST00000375618 TPCN1Q9ULQ1 816 aa18.44■□□□□ 0.54
C11orf88-202ENST00000375618 GNEQ9Y223 722 aaKnown RBP18.44■□□□□ 0.54
C11orf88-202ENST00000375618 ALPK3Q96L96 1907 aa18.43■□□□□ 0.54
C11orf88-202ENST00000375618 RBM47A0AV96 593 aaKnown RBP18.43■□□□□ 0.54
C11orf88-202ENST00000375618 DNM1LO00429 736 aa18.43■□□□□ 0.54
C11orf88-202ENST00000375618 ADAMTS3O15072 1205 aa18.43■□□□□ 0.54
C11orf88-202ENST00000375618 DUSP11O75319 330 aaKnown RBP18.43■□□□□ 0.54
C11orf88-202ENST00000375618 MYCNP04198 464 aaPredicted RBP18.43■□□□□ 0.54
C11orf88-202ENST00000375618 CAPN2P17655 700 aa18.43■□□□□ 0.54
C11orf88-202ENST00000375618 PDE4DQ08499 809 aa18.43■□□□□ 0.54
C11orf88-202ENST00000375618 TRAF1Q13077 416 aa18.43■□□□□ 0.54
C11orf88-202ENST00000375618 STK3Q13188 491 aa18.43■□□□□ 0.54
C11orf88-202ENST00000375618 NECAB2Q7Z6G3 386 aa18.43■□□□□ 0.54
C11orf88-202ENST00000375618 FCHSD1Q86WN1 690 aa18.43■□□□□ 0.54
C11orf88-202ENST00000375618 NSUN6Q8TEA1 469 aaKnown RBP18.43■□□□□ 0.54
C11orf88-202ENST00000375618 ZNF274Q96GC6 653 aaPredicted RBP18.43■□□□□ 0.54
C11orf88-202ENST00000375618 ZFP91Q96JP5 570 aaPredicted RBP18.43■□□□□ 0.54
C11orf88-202ENST00000375618 STXBP3O00186 592 aa18.42■□□□□ 0.54
C11orf88-202ENST00000375618 ARIH2O95376 493 aa18.42■□□□□ 0.54
C11orf88-202ENST00000375618 LARGE1O95461 756 aa18.42■□□□□ 0.54
C11orf88-202ENST00000375618 TNFAIP2Q03169 654 aa18.42■□□□□ 0.54
C11orf88-202ENST00000375618 PPP2R5BQ15173 497 aa18.42■□□□□ 0.54
C11orf88-202ENST00000375618 UBE2SQ16763 222 aa18.42■□□□□ 0.54
C11orf88-202ENST00000375618 ARHGEF16Q5VV41 709 aa18.42■□□□□ 0.54
C11orf88-202ENST00000375618 CCSAPQ6IQ19 270 aaPredicted RBP18.42■□□□□ 0.54
C11orf88-202ENST00000375618 KLHDC9Q8NEP7 349 aa18.42■□□□□ 0.54
C11orf88-202ENST00000375618 PDCD2LQ9BRP1 358 aa18.42■□□□□ 0.54
C11orf88-202ENST00000375618 UPF3AQ9H1J1 476 aaKnown RBP18.42■□□□□ 0.54
C11orf88-202ENST00000375618 MAP3K20Q9NYL2 800 aaKnown RBP18.42■□□□□ 0.54
C11orf88-202ENST00000375618 FRMPD4Q14CM0 1322 aa18.42■□□□□ 0.54
C11orf88-202ENST00000375618 CCDC196A0A1B0GTZ2 297 aa18.41■□□□□ 0.54
C11orf88-202ENST00000375618 PIK3CDO00329 1044 aa18.41■□□□□ 0.54
C11orf88-202ENST00000375618 EIF5BO60841 1220 aaKnown RBP18.41■□□□□ 0.54
C11orf88-202ENST00000375618 RGS20O76081 388 aa18.41■□□□□ 0.54
C11orf88-202ENST00000375618 NR3C2P08235 984 aa18.41■□□□□ 0.54
C11orf88-202ENST00000375618 PGM5Q15124 567 aa18.41■□□□□ 0.54
C11orf88-202ENST00000375618 PFKFB3Q16875 520 aaPredicted RBP18.41■□□□□ 0.54
C11orf88-202ENST00000375618 IQSEC1Q6DN90 963 aa18.41■□□□□ 0.54
C11orf88-202ENST00000375618 NOL8Q76FK4 1167 aaKnown RBP18.41■□□□□ 0.54
C11orf88-202ENST00000375618 SAMD3Q8N6K7 520 aa18.41■□□□□ 0.54
C11orf88-202ENST00000375618 ARRDC4Q8NCT1 418 aa18.41■□□□□ 0.54
C11orf88-202ENST00000375618 COPS5Q92905 334 aa18.41■□□□□ 0.54
C11orf88-202ENST00000375618 PRPF3O43395 683 aaKnown RBP18.4■□□□□ 0.54
C11orf88-202ENST00000375618 IFNAR1P17181 557 aa18.4■□□□□ 0.54
C11orf88-202ENST00000375618 NEK4P51957 841 aa18.4■□□□□ 0.54
C11orf88-202ENST00000375618 GJA9P57773 515 aa18.4■□□□□ 0.54
C11orf88-202ENST00000375618 BEX3Q00994 111 aa18.4■□□□□ 0.54
C11orf88-202ENST00000375618 SCRN1Q12765 414 aa18.4■□□□□ 0.54
C11orf88-202ENST00000375618 LRRC26Q2I0M4 334 aa18.4■□□□□ 0.54
C11orf88-202ENST00000375618 POTEDQ86YR6 584 aa18.4■□□□□ 0.54
C11orf88-202ENST00000375618 FERMT2Q96AC1 680 aa18.4■□□□□ 0.54
C11orf88-202ENST00000375618 IWS1Q96ST2 819 aa18.4■□□□□ 0.54
C11orf88-202ENST00000375618 C22orf23Q9BZE7 217 aa18.4■□□□□ 0.54
C11orf88-202ENST00000375618 WDR11Q9BZH6 1224 aa18.4■□□□□ 0.54
C11orf88-202ENST00000375618 SENP6Q9GZR1 1112 aaPredicted RBP18.4■□□□□ 0.54
C11orf88-202ENST00000375618 PSTPIP2Q9H939 334 aa18.4■□□□□ 0.54
C11orf88-202ENST00000375618 BARHL2Q9NY43 387 aa18.4■□□□□ 0.54
C11orf88-202ENST00000375618 PCDH10Q9P2E7 1040 aa18.4■□□□□ 0.54
C11orf88-202ENST00000375618 MYCLP12524 364 aaPredicted RBP18.39■□□□□ 0.53
C11orf88-202ENST00000375618 SCG2P13521 617 aa18.39■□□□□ 0.53
C11orf88-202ENST00000375618 RBM25P49756 843 aaKnown RBP18.39■□□□□ 0.53
C11orf88-202ENST00000375618 NAPAP54920 295 aa18.39■□□□□ 0.53
C11orf88-202ENST00000375618 NKX3-2P78367 333 aa18.39■□□□□ 0.53
C11orf88-202ENST00000375618 DUSP28Q4G0W2 176 aa18.39■□□□□ 0.53
C11orf88-202ENST00000375618 CCDC62Q6P9F0 684 aa18.39■□□□□ 0.53
C11orf88-202ENST00000375618 TLK2Q86UE8 772 aa18.39■□□□□ 0.53
C11orf88-202ENST00000375618 VSIG10LQ86VR7 867 aa18.39■□□□□ 0.53
C11orf88-202ENST00000375618 SLC26A6Q9BXS9 759 aa18.39■□□□□ 0.53
C11orf88-202ENST00000375618 PHF24Q9UPV7 400 aa18.39■□□□□ 0.53
C11orf88-202ENST00000375618 KBTBD13C9JR72 458 aa18.38■□□□□ 0.53
C11orf88-202ENST00000375618 DYNC1LI2O43237 492 aaPredicted RBP18.38■□□□□ 0.53
C11orf88-202ENST00000375618 PFKFB2O60825 505 aa18.38■□□□□ 0.53
C11orf88-202ENST00000375618 C6orf222P0C671 652 aaPredicted RBP18.38■□□□□ 0.53
C11orf88-202ENST00000375618 CST5P28325 142 aaPredicted RBP18.38■□□□□ 0.53
C11orf88-202ENST00000375618 MRPS9P82933 396 aaKnown RBP18.38■□□□□ 0.53
C11orf88-202ENST00000375618 ST3GAL1Q11201 340 aa18.38■□□□□ 0.53
C11orf88-202ENST00000375618 STXBP2Q15833 593 aa18.38■□□□□ 0.53
C11orf88-202ENST00000375618 KCNA10Q16322 511 aa18.38■□□□□ 0.53
C11orf88-202ENST00000375618 ME3Q16798 604 aa18.38■□□□□ 0.53
C11orf88-202ENST00000375618 SEPT14Q6ZU15 432 aa18.38■□□□□ 0.53
C11orf88-202ENST00000375618 SMARCC2Q8TAQ2 1214 aa18.38■□□□□ 0.53
C11orf88-202ENST00000375618 RNF26Q9BY78 433 aaPredicted RBP18.38■□□□□ 0.53
C11orf88-202ENST00000375618 CTDNEP1O95476 244 aa18.37■□□□□ 0.53
C11orf88-202ENST00000375618 ATN1P54259 1190 aaPredicted RBP18.37■□□□□ 0.53
C11orf88-202ENST00000375618 PPP1R18Q6NYC8 613 aa18.37■□□□□ 0.53
C11orf88-202ENST00000375618 RNF180Q86T96 592 aa18.37■□□□□ 0.53
C11orf88-202ENST00000375618 NECAB1Q8N987 351 aa18.37■□□□□ 0.53
C11orf88-202ENST00000375618 SCFD2Q8WU76 684 aa18.37■□□□□ 0.53
C11orf88-202ENST00000375618 PGBD1Q96JS3 809 aa18.37■□□□□ 0.53
C11orf88-202ENST00000375618 HTATIP2Q9BUP3 242 aa18.37■□□□□ 0.53
C11orf88-202ENST00000375618 RIC8AQ9NPQ8 531 aa18.37■□□□□ 0.53
C11orf88-202ENST00000375618 TMEM260Q9NX78 707 aa18.37■□□□□ 0.53
C11orf88-202ENST00000375618 A0A1W2PQ45 241 aaPredicted RBP18.36■□□□□ 0.53
C11orf88-202ENST00000375618 A0A1W2PQY0 241 aa18.36■□□□□ 0.53
C11orf88-202ENST00000375618 B4DLN1 442 aa18.36■□□□□ 0.53
C11orf88-202ENST00000375618 EIF3JO75822 258 aaKnown RBP18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms