RNA–Protein interactions for RNA: ENST00000375023.3

NOTCH4-201, Transcript of notch 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH4, Length 6,745 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4-201ENST00000375023 SERPINB6P35237 376 aa16.06■□□□□ 0.16
NOTCH4-201ENST00000375023 CRKLP46109 303 aaKnown RBP16.06■□□□□ 0.16
NOTCH4-201ENST00000375023 YWHAEP62258 255 aaKnown RBP16.06■□□□□ 0.16
NOTCH4-201ENST00000375023 DCAF15Q66K64 600 aa16.06■□□□□ 0.16
NOTCH4-201ENST00000375023 CCDC85CA6NKD9 419 aa16.06■□□□□ 0.16
NOTCH4-201ENST00000375023 CCDC68Q9H2F9 335 aa16.06■□□□□ 0.16
NOTCH4-201ENST00000375023 RSRC2Q7L4I2 434 aaKnown RBP16.06■□□□□ 0.16
NOTCH4-201ENST00000375023 NLRP7Q8WX94 980 aa16.06■□□□□ 0.16
NOTCH4-201ENST00000375023 UPP2O95045 317 aa16.06■□□□□ 0.16
NOTCH4-201ENST00000375023 TROVE2P10155 538 aaKnown RBP eCLIP16.06■□□□□ 0.16
NOTCH4-201ENST00000375023 IL17REQ8NFR9 667 aa16.06■□□□□ 0.16
NOTCH4-201ENST00000375023 DYNLL2Q96FJ2 89 aa16.06■□□□□ 0.16
NOTCH4-201ENST00000375023 NRBP1Q9UHY1 535 aa16.06■□□□□ 0.16
NOTCH4-201ENST00000375023 PPP2R2CQ9Y2T4 447 aa16.06■□□□□ 0.16
NOTCH4-201ENST00000375023 TMCO5AQ8N6Q1 288 aa16.05■□□□□ 0.16
NOTCH4-201ENST00000375023 CAPN7Q9Y6W3 813 aa16.05■□□□□ 0.16
NOTCH4-201ENST00000375023 CCDC84Q86UT8 332 aaPredicted RBP16.05■□□□□ 0.16
NOTCH4-201ENST00000375023 ZBTB38Q8NAP3 1195 aaPredicted RBP16.05■□□□□ 0.16
NOTCH4-201ENST00000375023 HAUS2Q9NVX0 235 aa16.05■□□□□ 0.16
NOTCH4-201ENST00000375023 PCDHA7Q9UN72 937 aa16.05■□□□□ 0.16
NOTCH4-201ENST00000375023 ZNF804BA4D1E1 1349 aa16.05■□□□□ 0.16
NOTCH4-201ENST00000375023 MAPKBP1O60336 1514 aa16.05■□□□□ 0.16
NOTCH4-201ENST00000375023 ZNF853P0CG23 659 aa16.05■□□□□ 0.16
NOTCH4-201ENST00000375023 PHKG2P15735 406 aa16.05■□□□□ 0.16
NOTCH4-201ENST00000375023 TSNAXIP1Q2TAA8 658 aa16.05■□□□□ 0.16
NOTCH4-201ENST00000375023 SLFN12Q8IYM2 578 aa16.05■□□□□ 0.16
NOTCH4-201ENST00000375023 OR8K1Q8NGG5 319 aa16.05■□□□□ 0.16
NOTCH4-201ENST00000375023 HAUS1Q96CS2 278 aa16.05■□□□□ 0.16
NOTCH4-201ENST00000375023 VCXQ9H320 206 aa16.05■□□□□ 0.16
NOTCH4-201ENST00000375023 DNAJC17Q9NVM6 304 aaKnown RBP16.05■□□□□ 0.16
NOTCH4-201ENST00000375023 LAMC3Q9Y6N6 1575 aa16.05■□□□□ 0.16
NOTCH4-201ENST00000375023 TEX14Q8IWB6 1497 aa16.05■□□□□ 0.16
NOTCH4-201ENST00000375023 F5H423 210 aaPredicted RBP16.05■□□□□ 0.16
NOTCH4-201ENST00000375023 DPYSL4O14531 572 aa16.05■□□□□ 0.16
NOTCH4-201ENST00000375023 GNA14O95837 355 aa16.05■□□□□ 0.16
NOTCH4-201ENST00000375023 GUCY2DQ02846 1103 aa16.05■□□□□ 0.16
NOTCH4-201ENST00000375023 CNOT6LQ96LI5 555 aaKnown RBP16.05■□□□□ 0.16
NOTCH4-201ENST00000375023 TBK1Q9UHD2 729 aa16.05■□□□□ 0.16
NOTCH4-201ENST00000375023 SYNDIG1LA6NDD5 238 aa16.05■□□□□ 0.16
NOTCH4-201ENST00000375023 TFAMQ00059 246 aaKnown RBP16.05■□□□□ 0.16
NOTCH4-201ENST00000375023 BRD3Q15059 726 aa16.05■□□□□ 0.16
NOTCH4-201ENST00000375023 ADCK5Q3MIX3 580 aa16.05■□□□□ 0.16
NOTCH4-201ENST00000375023 SPDYE1Q8NFV5 336 aaPredicted RBP16.05■□□□□ 0.16
NOTCH4-201ENST00000375023 ANTXR1Q9H6X2 564 aa16.05■□□□□ 0.16
NOTCH4-201ENST00000375023 COL17A1Q9UMD9 1497 aaPredicted RBP16.05■□□□□ 0.16
NOTCH4-201ENST00000375023 SEC31AO94979 1220 aaKnown RBP16.05■□□□□ 0.16
NOTCH4-201ENST00000375023 ACTN1P12814 892 aa16.05■□□□□ 0.16
NOTCH4-201ENST00000375023 ZNF18P17022 549 aa16.05■□□□□ 0.16
NOTCH4-201ENST00000375023 HOXA13P31271 388 aaPredicted RBP16.05■□□□□ 0.16
NOTCH4-201ENST00000375023 MRPS25P82663 173 aaKnown RBP16.05■□□□□ 0.16
NOTCH4-201ENST00000375023 SMAD1Q15797 465 aaKnown RBP16.05■□□□□ 0.16
NOTCH4-201ENST00000375023 ADALQ6DHV7 355 aa16.05■□□□□ 0.16
NOTCH4-201ENST00000375023 FAM71BQ8TC56 605 aa16.05■□□□□ 0.16
NOTCH4-201ENST00000375023 ANAPC5Q9UJX4 755 aa16.05■□□□□ 0.16
NOTCH4-201ENST00000375023 PHBP35232 272 aa16.04■□□□□ 0.16
NOTCH4-201ENST00000375023 SEPT12Q8IYM1 358 aa16.04■□□□□ 0.16
NOTCH4-201ENST00000375023 GOLGA8IPA6NC78 632 aa16.04■□□□□ 0.16
NOTCH4-201ENST00000375023 GOLGA8JA6NMD2 632 aa16.04■□□□□ 0.16
NOTCH4-201ENST00000375023 ATP2B4P23634 1241 aa16.04■□□□□ 0.16
NOTCH4-201ENST00000375023 MTERF2Q49AM1 385 aa16.04■□□□□ 0.16
NOTCH4-201ENST00000375023 EIF2AK4Q9P2K8 1649 aaKnown RBP16.04■□□□□ 0.16
NOTCH4-201ENST00000375023 WDR91A4D1P6 747 aa16.04■□□□□ 0.16
NOTCH4-201ENST00000375023 MTMR3Q13615 1198 aa16.04■□□□□ 0.16
NOTCH4-201ENST00000375023 ZKSCAN8Q15776 578 aaPredicted RBP16.04■□□□□ 0.16
NOTCH4-201ENST00000375023 CFAP36Q96G28 342 aa16.04■□□□□ 0.16
NOTCH4-201ENST00000375023 USP44Q9H0E7 712 aa16.04■□□□□ 0.16
NOTCH4-201ENST00000375023 DDIT3P35638 169 aa16.04■□□□□ 0.16
NOTCH4-201ENST00000375023 YIPF2Q9BWQ6 316 aa16.04■□□□□ 0.16
NOTCH4-201ENST00000375023 RIPOR2Q9Y4F9 1068 aa16.04■□□□□ 0.16
NOTCH4-201ENST00000375023 ADCY9O60503 1353 aa16.04■□□□□ 0.16
NOTCH4-201ENST00000375023 C2orf54Q08AI8 447 aa16.04■□□□□ 0.16
NOTCH4-201ENST00000375023 WHAMMQ8TF30 809 aa16.04■□□□□ 0.16
NOTCH4-201ENST00000375023 SFI1A8K8P3 1242 aa16.03■□□□□ 0.16
NOTCH4-201ENST00000375023 SRGAP2CP0DJJ0 459 aa16.03■□□□□ 0.16
NOTCH4-201ENST00000375023 MAP7Q14244 749 aa16.03■□□□□ 0.16
NOTCH4-201ENST00000375023 EXOC3L4Q17RC7 722 aa16.03■□□□□ 0.16
NOTCH4-201ENST00000375023 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.03■□□□□ 0.16
NOTCH4-201ENST00000375023 TSR3Q9UJK0 312 aaKnown RBP16.03■□□□□ 0.16
NOTCH4-201ENST00000375023 RNF40O75150 1001 aa16.03■□□□□ 0.16
NOTCH4-201ENST00000375023 USP17L2Q6R6M4 530 aa16.03■□□□□ 0.16
NOTCH4-201ENST00000375023 EXT2Q93063 718 aa16.03■□□□□ 0.16
NOTCH4-201ENST00000375023 ATP6V1E2Q96A05 226 aa16.03■□□□□ 0.16
NOTCH4-201ENST00000375023 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.03■□□□□ 0.16
NOTCH4-201ENST00000375023 ANGPTL3Q9Y5C1 460 aa16.03■□□□□ 0.16
NOTCH4-201ENST00000375023 CLTAP09496 248 aa16.03■□□□□ 0.16
NOTCH4-201ENST00000375023 CFAP61Q8NHU2 1237 aa16.03■□□□□ 0.16
NOTCH4-201ENST00000375023 NSFP46459 744 aaKnown RBP16.03■□□□□ 0.16
NOTCH4-201ENST00000375023 CDO1Q16878 200 aa16.03■□□□□ 0.16
NOTCH4-201ENST00000375023 CYP4F22Q6NT55 531 aa16.03■□□□□ 0.16
NOTCH4-201ENST00000375023 CXorf38Q8TB03 319 aa16.03■□□□□ 0.16
NOTCH4-201ENST00000375023 POLD4Q9HCU8 107 aa16.03■□□□□ 0.16
NOTCH4-201ENST00000375023 USH1CQ9Y6N9 552 aa16.03■□□□□ 0.16
NOTCH4-201ENST00000375023 EEF1GP26641 437 aaKnown RBP16.03■□□□□ 0.16
NOTCH4-201ENST00000375023 CASP14P31944 242 aa16.03■□□□□ 0.16
NOTCH4-201ENST00000375023 SLCO1A2P46721 670 aa16.03■□□□□ 0.16
NOTCH4-201ENST00000375023 PIGSQ96S52 555 aa16.03■□□□□ 0.16
NOTCH4-201ENST00000375023 SFMBT1Q9UHJ3 866 aa16.03■□□□□ 0.16
NOTCH4-201ENST00000375023 IRX4P78413 519 aa16.02■□□□□ 0.16
NOTCH4-201ENST00000375023 HABP4Q5JVS0 413 aaKnown RBP16.02■□□□□ 0.16
NOTCH4-201ENST00000375023 RINT1Q6NUQ1 792 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms