RNA–Protein interactions for RNA: ENST00000374676.4

HSPG2-202, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 411 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-202ENST00000374676 ALDH5A1P51649 535 aaPredicted RBP13.04□□□□□ -0.32
HSPG2-202ENST00000374676 UBXN2AP68543 259 aa13.04□□□□□ -0.32
HSPG2-202ENST00000374676 MAP3K21Q5TCX8 1036 aa13.04□□□□□ -0.32
HSPG2-202ENST00000374676 MCTP2Q6DN12 878 aa13.04□□□□□ -0.32
HSPG2-202ENST00000374676 FCHSD1Q86WN1 690 aa13.04□□□□□ -0.32
HSPG2-202ENST00000374676 INTS4Q96HW7 963 aaKnown RBP13.04□□□□□ -0.32
HSPG2-202ENST00000374676 MPHOSPH6Q99547 160 aaKnown RBP13.04□□□□□ -0.32
HSPG2-202ENST00000374676 SNAI1O95863 264 aaPredicted RBP13.03□□□□□ -0.32
HSPG2-202ENST00000374676 INHAP05111 366 aa13.03□□□□□ -0.32
HSPG2-202ENST00000374676 CYP2C19P33261 490 aa13.03□□□□□ -0.32
HSPG2-202ENST00000374676 NLRP5P59047 1200 aa13.03□□□□□ -0.32
HSPG2-202ENST00000374676 CACNB2Q08289 660 aaPredicted RBP13.03□□□□□ -0.32
HSPG2-202ENST00000374676 AP3B2Q13367 1082 aa13.03□□□□□ -0.32
HSPG2-202ENST00000374676 ARHGEF16Q5VV41 709 aa13.03□□□□□ -0.32
HSPG2-202ENST00000374676 ARMCX2Q7L311 632 aa13.03□□□□□ -0.32
HSPG2-202ENST00000374676 VSIG10LQ86VR7 867 aa13.03□□□□□ -0.32
HSPG2-202ENST00000374676 HSCBQ8IWL3 235 aa13.03□□□□□ -0.32
HSPG2-202ENST00000374676 DAGLBQ8NCG7 672 aa13.03□□□□□ -0.32
HSPG2-202ENST00000374676 SH3TC2Q8TF17 1288 aa13.03□□□□□ -0.32
HSPG2-202ENST00000374676 ZNF333Q96JL9 665 aa13.03□□□□□ -0.32
HSPG2-202ENST00000374676 PDCD2LQ9BRP1 358 aa13.03□□□□□ -0.32
HSPG2-202ENST00000374676 PHF20Q9BVI0 1012 aa13.03□□□□□ -0.32
HSPG2-202ENST00000374676 ABHD16BQ9H3Z7 469 aa13.03□□□□□ -0.32
HSPG2-202ENST00000374676 PXMP2Q9NR77 195 aa13.03□□□□□ -0.32
HSPG2-202ENST00000374676 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.03□□□□□ -0.32
HSPG2-202ENST00000374676 BIN2Q9UBW5 565 aaPredicted RBP13.03□□□□□ -0.32
HSPG2-202ENST00000374676 PCDHA4Q9UN74 947 aa13.03□□□□□ -0.32
HSPG2-202ENST00000374676 KIF3AQ9Y496 699 aa13.03□□□□□ -0.32
HSPG2-202ENST00000374676 FRMPD4Q14CM0 1322 aa13.03□□□□□ -0.32
HSPG2-202ENST00000374676 KIAA1217Q5T5P2 1943 aa13.02□□□□□ -0.32
HSPG2-202ENST00000374676 SPDYE3A6NKU9 549 aa13.02□□□□□ -0.33
HSPG2-202ENST00000374676 M0R2N6 131 aa13.02□□□□□ -0.33
HSPG2-202ENST00000374676 NR3C2P08235 984 aa13.02□□□□□ -0.33
HSPG2-202ENST00000374676 PRKAR2AP13861 404 aaKnown RBP13.02□□□□□ -0.33
HSPG2-202ENST00000374676 EIF2AK2P19525 551 aaKnown RBP13.02□□□□□ -0.33
HSPG2-202ENST00000374676 TRIM32Q13049 653 aa13.02□□□□□ -0.33
HSPG2-202ENST00000374676 NPY5RQ15761 445 aa13.02□□□□□ -0.33
HSPG2-202ENST00000374676 UBE2SQ16763 222 aa13.02□□□□□ -0.33
HSPG2-202ENST00000374676 XRRA1Q6P2D8 792 aa13.02□□□□□ -0.33
HSPG2-202ENST00000374676 BLIDQ8IZY5 108 aa13.02□□□□□ -0.33
HSPG2-202ENST00000374676 REXO1Q8N1G1 1221 aaKnown RBP13.02□□□□□ -0.33
HSPG2-202ENST00000374676 FAM184AQ8NB25 1140 aa13.02□□□□□ -0.33
HSPG2-202ENST00000374676 EHMT1Q9H9B1 1298 aa13.02□□□□□ -0.33
HSPG2-202ENST00000374676 PCDHA6Q9UN73 950 aa13.02□□□□□ -0.33
HSPG2-202ENST00000374676 KCNJ14Q9UNX9 436 aa13.02□□□□□ -0.33
HSPG2-202ENST00000374676 SMC3Q9UQE7 1217 aa13.02□□□□□ -0.33
HSPG2-202ENST00000374676 CNPY2Q9Y2B0 182 aa13.02□□□□□ -0.33
HSPG2-202ENST00000374676 PCDHA8Q9Y5H6 950 aa13.02□□□□□ -0.33
HSPG2-202ENST00000374676 RPTORQ8N122 1335 aa13.02□□□□□ -0.33
HSPG2-202ENST00000374676 EIF3JO75822 258 aaKnown RBP13.01□□□□□ -0.33
HSPG2-202ENST00000374676 ZNF865P0CJ78 1059 aaPredicted RBP13.01□□□□□ -0.33
HSPG2-202ENST00000374676 CYBAP13498 195 aa13.01□□□□□ -0.33
HSPG2-202ENST00000374676 GJB2P29033 226 aa13.01□□□□□ -0.33
HSPG2-202ENST00000374676 PDE4DQ08499 809 aa13.01□□□□□ -0.33
HSPG2-202ENST00000374676 ACVR2BQ13705 512 aa13.01□□□□□ -0.33
HSPG2-202ENST00000374676 TRIM29Q14134 588 aa13.01□□□□□ -0.33
HSPG2-202ENST00000374676 PGM5Q15124 567 aa13.01□□□□□ -0.33
HSPG2-202ENST00000374676 STXBP2Q15833 593 aa13.01□□□□□ -0.33
HSPG2-202ENST00000374676 JAKMIP3Q5VZ66 844 aa13.01□□□□□ -0.33
HSPG2-202ENST00000374676 KRT40Q6A162 431 aa13.01□□□□□ -0.33
HSPG2-202ENST00000374676 TRPV1Q8NER1 839 aa13.01□□□□□ -0.33
HSPG2-202ENST00000374676 FBXO18Q8NFZ0 1043 aa13.01□□□□□ -0.33
HSPG2-202ENST00000374676 C8orf76Q96K31 380 aa13.01□□□□□ -0.33
HSPG2-202ENST00000374676 KATNBL1Q9H079 304 aa13.01□□□□□ -0.33
HSPG2-202ENST00000374676 VTA1Q9NP79 307 aa13.01□□□□□ -0.33
HSPG2-202ENST00000374676 GJB4Q9NTQ9 266 aa13.01□□□□□ -0.33
HSPG2-202ENST00000374676 MYH7BA7E2Y1 1941 aa13.01□□□□□ -0.33
HSPG2-202ENST00000374676 RBM47A0AV96 593 aaKnown RBP13□□□□□ -0.33
HSPG2-202ENST00000374676 ADAMTS3O15072 1205 aa13□□□□□ -0.33
HSPG2-202ENST00000374676 STAM2O75886 525 aa13□□□□□ -0.33
HSPG2-202ENST00000374676 CCND2P30279 289 aa13□□□□□ -0.33
HSPG2-202ENST00000374676 PRAMEF19Q5SWL8 479 aa13□□□□□ -0.33
HSPG2-202ENST00000374676 PCNX4Q63HM2 1172 aa13□□□□□ -0.33
HSPG2-202ENST00000374676 ANO3Q9BYT9 981 aa13□□□□□ -0.33
HSPG2-202ENST00000374676 HMX1Q9NP08 348 aaPredicted RBP13□□□□□ -0.33
HSPG2-202ENST00000374676 TMEM260Q9NX78 707 aa13□□□□□ -0.33
HSPG2-202ENST00000374676 LRRC37A2A6NM11 1700 aa12.99□□□□□ -0.33
HSPG2-202ENST00000374676 SEPT4O43236 478 aa12.99□□□□□ -0.33
HSPG2-202ENST00000374676 MMP1P03956 469 aa12.99□□□□□ -0.33
HSPG2-202ENST00000374676 CYP3A4P08684 503 aa12.99□□□□□ -0.33
HSPG2-202ENST00000374676 MYCLP12524 364 aaPredicted RBP12.99□□□□□ -0.33
HSPG2-202ENST00000374676 CCL5P13501 91 aa12.99□□□□□ -0.33
HSPG2-202ENST00000374676 SREBF1P36956 1147 aa12.99□□□□□ -0.33
HSPG2-202ENST00000374676 MTFR1Q15390 333 aa12.99□□□□□ -0.33
HSPG2-202ENST00000374676 TAPT1Q6NXT6 567 aa12.99□□□□□ -0.33
HSPG2-202ENST00000374676 IL31RAQ8NI17 732 aa12.99□□□□□ -0.33
HSPG2-202ENST00000374676 CRYGNQ8WXF5 182 aa12.99□□□□□ -0.33
HSPG2-202ENST00000374676 UNC93B1Q9H1C4 597 aa12.99□□□□□ -0.33
HSPG2-202ENST00000374676 BRMS1Q9HCU9 246 aa12.99□□□□□ -0.33
HSPG2-202ENST00000374676 PAK6Q9NQU5 681 aaPredicted RBP12.99□□□□□ -0.33
HSPG2-202ENST00000374676 DDX49Q9Y6V7 483 aaKnown RBP12.99□□□□□ -0.33
HSPG2-202ENST00000374676 MSCO60682 206 aa12.98□□□□□ -0.33
HSPG2-202ENST00000374676 CAPN2P17655 700 aa12.98□□□□□ -0.33
HSPG2-202ENST00000374676 CCND3P30281 292 aaPredicted RBP12.98□□□□□ -0.33
HSPG2-202ENST00000374676 KRT2P35908 639 aa12.98□□□□□ -0.33
HSPG2-202ENST00000374676 MRPS9P82933 396 aaKnown RBP12.98□□□□□ -0.33
HSPG2-202ENST00000374676 BECN1Q14457 450 aa12.98□□□□□ -0.33
HSPG2-202ENST00000374676 SAFBQ15424 915 aaKnown RBP eCLIP12.98□□□□□ -0.33
HSPG2-202ENST00000374676 IQSEC1Q6DN90 963 aa12.98□□□□□ -0.33
HSPG2-202ENST00000374676 KRT25Q7Z3Z0 450 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms