RNA–Protein interactions for RNA: ENST00000374454.1

PDZD11-202, Transcript of PDZ domain containing 11, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PDZD11, Length 784 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD11-202ENST00000374454 UBE2SQ16763 222 aa11.38□□□□□ -0.59
PDZD11-202ENST00000374454 KRT40Q6A162 431 aa11.38□□□□□ -0.59
PDZD11-202ENST00000374454 XRRA1Q6P2D8 792 aa11.38□□□□□ -0.59
PDZD11-202ENST00000374454 FBXO46Q6PJ61 603 aaPredicted RBP11.38□□□□□ -0.59
PDZD11-202ENST00000374454 FCHSD1Q86WN1 690 aa11.38□□□□□ -0.59
PDZD11-202ENST00000374454 REXO1Q8N1G1 1221 aaKnown RBP11.38□□□□□ -0.59
PDZD11-202ENST00000374454 PURBQ96QR8 312 aaKnown RBP11.38□□□□□ -0.59
PDZD11-202ENST00000374454 MPHOSPH6Q99547 160 aaKnown RBP11.38□□□□□ -0.59
PDZD11-202ENST00000374454 TINF2Q9BSI4 451 aa11.38□□□□□ -0.59
PDZD11-202ENST00000374454 PXMP2Q9NR77 195 aa11.38□□□□□ -0.59
PDZD11-202ENST00000374454 GJB4Q9NTQ9 266 aa11.38□□□□□ -0.59
PDZD11-202ENST00000374454 PCDHA6Q9UN73 950 aa11.38□□□□□ -0.59
PDZD11-202ENST00000374454 PCDHA8Q9Y5H6 950 aa11.38□□□□□ -0.59
PDZD11-202ENST00000374454 RPTORQ8N122 1335 aa11.37□□□□□ -0.59
PDZD11-202ENST00000374454 SPDYE3A6NKU9 549 aa11.37□□□□□ -0.59
PDZD11-202ENST00000374454 HSP90AA1P07900 732 aaKnown RBP11.37□□□□□ -0.59
PDZD11-202ENST00000374454 GRK4P32298 578 aa11.37□□□□□ -0.59
PDZD11-202ENST00000374454 KRT2P35908 639 aa11.37□□□□□ -0.59
PDZD11-202ENST00000374454 SAFBQ15424 915 aaKnown RBP eCLIP11.37□□□□□ -0.59
PDZD11-202ENST00000374454 CCL14Q16627 93 aa11.37□□□□□ -0.59
PDZD11-202ENST00000374454 ARHGEF16Q5VV41 709 aa11.37□□□□□ -0.59
PDZD11-202ENST00000374454 MFSD14CQ5VZR4 134 aa11.37□□□□□ -0.59
PDZD11-202ENST00000374454 LARP1BQ659C4 914 aaKnown RBP11.37□□□□□ -0.59
PDZD11-202ENST00000374454 VSIG10LQ86VR7 867 aa11.37□□□□□ -0.59
PDZD11-202ENST00000374454 TRIB2Q92519 343 aa11.37□□□□□ -0.59
PDZD11-202ENST00000374454 PDCD2LQ9BRP1 358 aa11.37□□□□□ -0.59
PDZD11-202ENST00000374454 EHMT1Q9H9B1 1298 aa11.37□□□□□ -0.59
PDZD11-202ENST00000374454 BRMS1Q9HCU9 246 aa11.37□□□□□ -0.59
PDZD11-202ENST00000374454 TSHZ2Q9NRE2 1034 aa11.37□□□□□ -0.59
PDZD11-202ENST00000374454 FLRT1Q9NZU1 646 aa11.37□□□□□ -0.59
PDZD11-202ENST00000374454 BIN2Q9UBW5 565 aaPredicted RBP11.37□□□□□ -0.59
PDZD11-202ENST00000374454 NRBP1Q9UHY1 535 aa11.37□□□□□ -0.59
PDZD11-202ENST00000374454 PTCH2Q9Y6C5 1203 aa11.37□□□□□ -0.59
PDZD11-202ENST00000374454 PLXNB2O15031 1838 aa11.37□□□□□ -0.59
PDZD11-202ENST00000374454 ZNFX1Q9P2E3 1918 aaKnown RBP11.37□□□□□ -0.59
PDZD11-202ENST00000374454 ADAMTS3O15072 1205 aa11.36□□□□□ -0.59
PDZD11-202ENST00000374454 EIF3JO75822 258 aaKnown RBP11.36□□□□□ -0.59
PDZD11-202ENST00000374454 HMGCRP04035 888 aa11.36□□□□□ -0.59
PDZD11-202ENST00000374454 NR3C2P08235 984 aa11.36□□□□□ -0.59
PDZD11-202ENST00000374454 SREBF1P36956 1147 aa11.36□□□□□ -0.59
PDZD11-202ENST00000374454 ANP32AP39687 249 aaKnown RBP11.36□□□□□ -0.59
PDZD11-202ENST00000374454 JAKMIP3Q5VZ66 844 aa11.36□□□□□ -0.59
PDZD11-202ENST00000374454 TNFRSF25Q93038 417 aa11.36□□□□□ -0.59
PDZD11-202ENST00000374454 FOXP1Q9H334 677 aaPredicted RBP11.36□□□□□ -0.59
PDZD11-202ENST00000374454 TMEM260Q9NX78 707 aa11.36□□□□□ -0.59
PDZD11-202ENST00000374454 ZSWIM8A7E2V4 1837 aa11.36□□□□□ -0.59
PDZD11-202ENST00000374454 HTTP42858 3142 aa11.35□□□□□ -0.59
PDZD11-202ENST00000374454 BTBD18B2RXH4 712 aa11.35□□□□□ -0.59
PDZD11-202ENST00000374454 H3BQV1 296 aa11.35□□□□□ -0.59
PDZD11-202ENST00000374454 STAM2O75886 525 aa11.35□□□□□ -0.59
PDZD11-202ENST00000374454 SNAI1O95863 264 aaPredicted RBP11.35□□□□□ -0.59
PDZD11-202ENST00000374454 CYP3A4P08684 503 aa11.35□□□□□ -0.59
PDZD11-202ENST00000374454 ELNP15502 786 aa11.35□□□□□ -0.59
PDZD11-202ENST00000374454 EIF2AK2P19525 551 aaKnown RBP11.35□□□□□ -0.59
PDZD11-202ENST00000374454 CCND2P30279 289 aa11.35□□□□□ -0.59
PDZD11-202ENST00000374454 CYP2C19P33261 490 aa11.35□□□□□ -0.59
PDZD11-202ENST00000374454 USP11P51784 963 aa11.35□□□□□ -0.59
PDZD11-202ENST00000374454 GUCY1B3Q02153 619 aa11.35□□□□□ -0.59
PDZD11-202ENST00000374454 PGM5Q15124 567 aa11.35□□□□□ -0.59
PDZD11-202ENST00000374454 STXBP2Q15833 593 aa11.35□□□□□ -0.59
PDZD11-202ENST00000374454 MAP3K21Q5TCX8 1036 aa11.35□□□□□ -0.59
PDZD11-202ENST00000374454 IFFO2Q5TF58 517 aa11.35□□□□□ -0.59
PDZD11-202ENST00000374454 PCNX4Q63HM2 1172 aa11.35□□□□□ -0.59
PDZD11-202ENST00000374454 ARMCX2Q7L311 632 aa11.35□□□□□ -0.59
PDZD11-202ENST00000374454 KRT25Q7Z3Z0 450 aa11.35□□□□□ -0.59
PDZD11-202ENST00000374454 DIS3L2Q8IYB7 885 aaKnown RBP11.35□□□□□ -0.59
PDZD11-202ENST00000374454 OXER1Q8TDS5 423 aa11.35□□□□□ -0.59
PDZD11-202ENST00000374454 CRYGNQ8WXF5 182 aa11.35□□□□□ -0.59
PDZD11-202ENST00000374454 ANO3Q9BYT9 981 aa11.35□□□□□ -0.59
PDZD11-202ENST00000374454 ABHD16BQ9H3Z7 469 aa11.35□□□□□ -0.59
PDZD11-202ENST00000374454 VTA1Q9NP79 307 aa11.35□□□□□ -0.59
PDZD11-202ENST00000374454 FOXD4L1Q9NU39 408 aa11.35□□□□□ -0.59
PDZD11-202ENST00000374454 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.35□□□□□ -0.59
PDZD11-202ENST00000374454 RBM19Q9Y4C8 960 aaKnown RBP11.35□□□□□ -0.59
PDZD11-202ENST00000374454 SYT1P21579 422 aa11.34□□□□□ -0.59
PDZD11-202ENST00000374454 U2AF2P26368 475 aaKnown RBP eCLIP11.34□□□□□ -0.59
PDZD11-202ENST00000374454 CIITAP33076 1130 aa11.34□□□□□ -0.59
PDZD11-202ENST00000374454 FOSBP53539 338 aa11.34□□□□□ -0.59
PDZD11-202ENST00000374454 ARHGAP4P98171 946 aa11.34□□□□□ -0.59
PDZD11-202ENST00000374454 CACNB2Q08289 660 aaPredicted RBP11.34□□□□□ -0.59
PDZD11-202ENST00000374454 PDE4DQ08499 809 aa11.34□□□□□ -0.59
PDZD11-202ENST00000374454 ACVR2BQ13705 512 aa11.34□□□□□ -0.59
PDZD11-202ENST00000374454 SLC9C1Q4G0N8 1177 aa11.34□□□□□ -0.59
PDZD11-202ENST00000374454 RASGRP4Q8TDF6 673 aa11.34□□□□□ -0.59
PDZD11-202ENST00000374454 ARMC5Q96C12 935 aa11.34□□□□□ -0.59
PDZD11-202ENST00000374454 KATNBL1Q9H079 304 aa11.34□□□□□ -0.59
PDZD11-202ENST00000374454 CNPY2Q9Y2B0 182 aa11.34□□□□□ -0.59
PDZD11-202ENST00000374454 CCDC194A0A1B0GVG4 234 aa11.33□□□□□ -0.6
PDZD11-202ENST00000374454 RBM47A0AV96 593 aaKnown RBP11.33□□□□□ -0.6
PDZD11-202ENST00000374454 INHAP05111 366 aa11.33□□□□□ -0.6
PDZD11-202ENST00000374454 ZNF865P0CJ78 1059 aaPredicted RBP11.33□□□□□ -0.6
PDZD11-202ENST00000374454 UBXN2AP68543 259 aa11.33□□□□□ -0.6
PDZD11-202ENST00000374454 MRPS9P82933 396 aaKnown RBP11.33□□□□□ -0.6
PDZD11-202ENST00000374454 NR5A1Q13285 461 aa11.33□□□□□ -0.6
PDZD11-202ENST00000374454 NONOQ15233 471 aaKnown RBP eCLIP11.33□□□□□ -0.6
PDZD11-202ENST00000374454 TAPT1Q6NXT6 567 aa11.33□□□□□ -0.6
PDZD11-202ENST00000374454 NIPA1Q7RTP0 329 aa11.33□□□□□ -0.6
PDZD11-202ENST00000374454 IL31RAQ8NI17 732 aa11.33□□□□□ -0.6
PDZD11-202ENST00000374454 MCOLN1Q9GZU1 580 aa11.33□□□□□ -0.6
PDZD11-202ENST00000374454 UBIAD1Q9Y5Z9 338 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms