RNA–Protein interactions for RNA: ENST00000374217.6

UBXN11-204, Transcript of UBX domain protein 11, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene UBXN11, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-204ENST00000374217 TEX33O43247 280 aa16.71■□□□□ 0.27
UBXN11-204ENST00000374217 TSPY3P0CV98 308 aa16.71■□□□□ 0.27
UBXN11-204ENST00000374217 TSPY8P0CW00 308 aa16.71■□□□□ 0.27
UBXN11-204ENST00000374217 TFAP4Q01664 338 aa16.71■□□□□ 0.27
UBXN11-204ENST00000374217 STIM1Q13586 685 aa16.71■□□□□ 0.27
UBXN11-204ENST00000374217 FAM47AQ5JRC9 791 aa16.71■□□□□ 0.27
UBXN11-204ENST00000374217 NFXL1Q6ZNB6 911 aa16.71■□□□□ 0.27
UBXN11-204ENST00000374217 SH3RF1Q7Z6J0 888 aa16.71■□□□□ 0.27
UBXN11-204ENST00000374217 FAM76AQ8TAV0 307 aa16.71■□□□□ 0.27
UBXN11-204ENST00000374217 TRPM4Q8TD43 1214 aa16.71■□□□□ 0.27
UBXN11-204ENST00000374217 CRACR2AQ9BSW2 395 aa16.71■□□□□ 0.27
UBXN11-204ENST00000374217 EBAG9O00559 213 aa16.7■□□□□ 0.26
UBXN11-204ENST00000374217 CLSTN1O94985 981 aa16.7■□□□□ 0.26
UBXN11-204ENST00000374217 PRR29P0C7W0 189 aa16.7■□□□□ 0.26
UBXN11-204ENST00000374217 PPFIA1Q13136 1202 aa16.7■□□□□ 0.26
UBXN11-204ENST00000374217 PTPN21Q16825 1174 aa16.7■□□□□ 0.26
UBXN11-204ENST00000374217 PAPD7Q5XG87 772 aaKnown RBP16.7■□□□□ 0.26
UBXN11-204ENST00000374217 CCDC70Q6NSX1 233 aa16.7■□□□□ 0.26
UBXN11-204ENST00000374217 SH3BP5LQ7L8J4 393 aa16.7■□□□□ 0.26
UBXN11-204ENST00000374217 TEX2Q8IWB9 1127 aa16.7■□□□□ 0.26
UBXN11-204ENST00000374217 TRIM22Q8IYM9 498 aa16.7■□□□□ 0.26
UBXN11-204ENST00000374217 SUGCTQ9HAC7 445 aa16.7■□□□□ 0.26
UBXN11-204ENST00000374217 ATRNL1Q5VV63 1379 aa16.7■□□□□ 0.26
UBXN11-204ENST00000374217 MYH8P13535 1937 aa16.7■□□□□ 0.26
UBXN11-204ENST00000374217 COL2A1P02458 1487 aaPredicted RBP16.7■□□□□ 0.26
UBXN11-204ENST00000374217 ANO9A1A5B4 782 aa16.7■□□□□ 0.26
UBXN11-204ENST00000374217 RASA3Q14644 834 aa16.7■□□□□ 0.26
UBXN11-204ENST00000374217 WTAPQ15007 396 aa16.7■□□□□ 0.26
UBXN11-204ENST00000374217 ANGEL2Q5VTE6 544 aaKnown RBP16.7■□□□□ 0.26
UBXN11-204ENST00000374217 APOBEC3FQ8IUX4 373 aaKnown RBP16.7■□□□□ 0.26
UBXN11-204ENST00000374217 NOA1Q8NC60 698 aaKnown RBP16.7■□□□□ 0.26
UBXN11-204ENST00000374217 L3MBTL3Q96JM7 780 aaPredicted RBP16.7■□□□□ 0.26
UBXN11-204ENST00000374217 AIFM3Q96NN9 605 aa16.7■□□□□ 0.26
UBXN11-204ENST00000374217 ZSCAN10Q96SZ4 725 aaPredicted RBP16.7■□□□□ 0.26
UBXN11-204ENST00000374217 TMEM39BQ9GZU3 492 aa16.7■□□□□ 0.26
UBXN11-204ENST00000374217 TAOK2Q9UL54 1235 aa16.7■□□□□ 0.26
UBXN11-204ENST00000374217 CNTNAP1P78357 1384 aa16.69■□□□□ 0.26
UBXN11-204ENST00000374217 ASTN2O75129 1339 aaPredicted RBP16.69■□□□□ 0.26
UBXN11-204ENST00000374217 ERLIN2O94905 339 aa16.69■□□□□ 0.26
UBXN11-204ENST00000374217 RASA1P20936 1047 aa16.69■□□□□ 0.26
UBXN11-204ENST00000374217 TOB1P50616 345 aaPredicted RBP16.69■□□□□ 0.26
UBXN11-204ENST00000374217 ITIH3Q06033 890 aa16.69■□□□□ 0.26
UBXN11-204ENST00000374217 HSP90AA4PQ58FG1 418 aa16.69■□□□□ 0.26
UBXN11-204ENST00000374217 NKX2-3Q8TAU0 364 aa16.69■□□□□ 0.26
UBXN11-204ENST00000374217 IGDCC4Q8TDY8 1250 aa16.69■□□□□ 0.26
UBXN11-204ENST00000374217 SAR1BQ9Y6B6 198 aa16.69■□□□□ 0.26
UBXN11-204ENST00000374217 TNKSO95271 1327 aa16.69■□□□□ 0.26
UBXN11-204ENST00000374217 CCDC196A0A1B0GTZ2 297 aa16.68■□□□□ 0.26
UBXN11-204ENST00000374217 IQCA1LA6NCM1 817 aa16.68■□□□□ 0.26
UBXN11-204ENST00000374217 GOLGA8KD6RF30 607 aa16.68■□□□□ 0.26
UBXN11-204ENST00000374217 GSCP56915 257 aaPredicted RBP16.68■□□□□ 0.26
UBXN11-204ENST00000374217 GABPAQ06546 454 aa16.68■□□□□ 0.26
UBXN11-204ENST00000374217 CCDC178Q5BJE1 867 aa16.68■□□□□ 0.26
UBXN11-204ENST00000374217 DIS3L2Q8IYB7 885 aaKnown RBP16.68■□□□□ 0.26
UBXN11-204ENST00000374217 TMTC2Q8N394 836 aa16.68■□□□□ 0.26
UBXN11-204ENST00000374217 FERMT2Q96AC1 680 aa16.68■□□□□ 0.26
UBXN11-204ENST00000374217 LY9Q9HBG7 655 aa16.68■□□□□ 0.26
UBXN11-204ENST00000374217 GGA3Q9NZ52 723 aa16.68■□□□□ 0.26
UBXN11-204ENST00000374217 SCAF8Q9UPN6 1271 aaKnown RBP16.68■□□□□ 0.26
UBXN11-204ENST00000374217 DEXIO95424 95 aa16.68■□□□□ 0.26
UBXN11-204ENST00000374217 CHRM1P11229 460 aaPredicted RBP16.68■□□□□ 0.26
UBXN11-204ENST00000374217 FXR1P51114 621 aaKnown RBP eCLIP16.68■□□□□ 0.26
UBXN11-204ENST00000374217 ERVK-24P63145 666 aa16.68■□□□□ 0.26
UBXN11-204ENST00000374217 KRT83P78385 493 aa16.68■□□□□ 0.26
UBXN11-204ENST00000374217 SEMA3FQ13275 785 aa16.68■□□□□ 0.26
UBXN11-204ENST00000374217 PPP2R5BQ15173 497 aa16.68■□□□□ 0.26
UBXN11-204ENST00000374217 WWC2Q6AWC2 1192 aa16.68■□□□□ 0.26
UBXN11-204ENST00000374217 PHKBQ93100 1093 aa16.68■□□□□ 0.26
UBXN11-204ENST00000374217 DEFB129Q9H1M3 183 aa16.68■□□□□ 0.26
UBXN11-204ENST00000374217 HERC5Q9UII4 1024 aaKnown RBP16.68■□□□□ 0.26
UBXN11-204ENST00000374217 FAM196BA6NMK8 535 aa16.67■□□□□ 0.26
UBXN11-204ENST00000374217 MPHOSPH10O00566 681 aaKnown RBP16.67■□□□□ 0.26
UBXN11-204ENST00000374217 PHACTR2O75167 634 aa16.67■□□□□ 0.26
UBXN11-204ENST00000374217 EPHX2P34913 555 aa16.67■□□□□ 0.26
UBXN11-204ENST00000374217 HIRAP54198 1017 aaPredicted RBP16.67■□□□□ 0.26
UBXN11-204ENST00000374217 IFIT1BQ5T764 474 aaKnown RBP16.67■□□□□ 0.26
UBXN11-204ENST00000374217 MICU3Q86XE3 530 aa16.67■□□□□ 0.26
UBXN11-204ENST00000374217 ACRBPQ8NEB7 543 aa16.67■□□□□ 0.26
UBXN11-204ENST00000374217 DCPSQ96C86 337 aaKnown RBP16.67■□□□□ 0.26
UBXN11-204ENST00000374217 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.67■□□□□ 0.26
UBXN11-204ENST00000374217 A1CFQ9NQ94 594 aaKnown RBP16.67■□□□□ 0.26
UBXN11-204ENST00000374217 FAM217BQ9NTX9 383 aaPredicted RBP16.67■□□□□ 0.26
UBXN11-204ENST00000374217 RWDD2AQ9UIY3 292 aa16.67■□□□□ 0.26
UBXN11-204ENST00000374217 SLC12A7Q9Y666 1083 aa16.67■□□□□ 0.26
UBXN11-204ENST00000374217 EPN1Q9Y6I3 576 aaPredicted RBP16.67■□□□□ 0.26
UBXN11-204ENST00000374217 GOLGA6CA6NDK9 693 aa16.66■□□□□ 0.26
UBXN11-204ENST00000374217 PPP1R3GB7ZBB8 358 aa16.66■□□□□ 0.26
UBXN11-204ENST00000374217 OPA1O60313 960 aa16.66■□□□□ 0.26
UBXN11-204ENST00000374217 NDUFA10O95299 355 aa16.66■□□□□ 0.26
UBXN11-204ENST00000374217 GOLGA6DP0CG33 693 aa16.66■□□□□ 0.26
UBXN11-204ENST00000374217 EPB41P11171 864 aaKnown RBP16.66■□□□□ 0.26
UBXN11-204ENST00000374217 SHMT1P34896 483 aa16.66■□□□□ 0.26
UBXN11-204ENST00000374217 AKAP17AQ02040 695 aaKnown RBP16.66■□□□□ 0.26
UBXN11-204ENST00000374217 DPYDQ12882 1025 aa16.66■□□□□ 0.26
UBXN11-204ENST00000374217 CERKLQ49MI3 558 aaPredicted RBP16.66■□□□□ 0.26
UBXN11-204ENST00000374217 USP50Q70EL3 339 aaPredicted RBP16.66■□□□□ 0.26
UBXN11-204ENST00000374217 CPLX3Q8WVH0 158 aa16.66■□□□□ 0.26
UBXN11-204ENST00000374217 CCDC17Q96LX7 622 aa16.66■□□□□ 0.26
UBXN11-204ENST00000374217 SLC26A6Q9BXS9 759 aa16.66■□□□□ 0.26
UBXN11-204ENST00000374217 GOLGA6AQ9NYA3 693 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms