RNA–Protein interactions for RNA: ENST00000373589.8

HDAC8-209, Transcript of histone deacetylase 8, humanhuman

TSL 2 BASIC

Gene HDAC8, Length 1,740 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-209ENST00000373589 SPP2Q13103 211 aa17.69■□□□□ 0.42
HDAC8-209ENST00000373589 DGKZQ13574 1117 aa17.69■□□□□ 0.42
HDAC8-209ENST00000373589 SUPT20HL1Q3ZLR7 823 aa17.69■□□□□ 0.42
HDAC8-209ENST00000373589 C9orf131Q5VYM1 1079 aa17.69■□□□□ 0.42
HDAC8-209ENST00000373589 ENOX1Q8TC92 643 aaKnown RBP17.69■□□□□ 0.42
HDAC8-209ENST00000373589 TBC1D5Q92609 795 aa17.69■□□□□ 0.42
HDAC8-209ENST00000373589 PLIN2Q99541 437 aa17.69■□□□□ 0.42
HDAC8-209ENST00000373589 AS3MTQ9HBK9 375 aa17.69■□□□□ 0.42
HDAC8-209ENST00000373589 POTEMA6NI47 508 aa17.68■□□□□ 0.42
HDAC8-209ENST00000373589 GCOM1H8Y6P7 765 aaPredicted RBP17.68■□□□□ 0.42
HDAC8-209ENST00000373589 POLR2MP0CAP2 368 aa17.68■□□□□ 0.42
HDAC8-209ENST00000373589 GRB10Q13322 594 aa17.68■□□□□ 0.42
HDAC8-209ENST00000373589 NOL9Q5SY16 702 aaKnown RBP17.68■□□□□ 0.42
HDAC8-209ENST00000373589 ZNF280CQ8ND82 737 aa17.68■□□□□ 0.42
HDAC8-209ENST00000373589 LENG9Q96B70 501 aa17.68■□□□□ 0.42
HDAC8-209ENST00000373589 CALML4Q96GE6 196 aa17.68■□□□□ 0.42
HDAC8-209ENST00000373589 MED15Q96RN5 788 aa17.68■□□□□ 0.42
HDAC8-209ENST00000373589 PICK1Q9NRD5 415 aa17.68■□□□□ 0.42
HDAC8-209ENST00000373589 FZD1Q9UP38 647 aa17.68■□□□□ 0.42
HDAC8-209ENST00000373589 ZKSCAN5Q9Y2L8 839 aa17.68■□□□□ 0.42
HDAC8-209ENST00000373589 TBX3O15119 743 aa17.67■□□□□ 0.42
HDAC8-209ENST00000373589 CFBP00751 764 aa17.67■□□□□ 0.42
HDAC8-209ENST00000373589 RPN1P04843 607 aaKnown RBP17.67■□□□□ 0.42
HDAC8-209ENST00000373589 SPC24Q8NBT2 197 aa17.67■□□□□ 0.42
HDAC8-209ENST00000373589 ETNPPLQ8TBG4 499 aa17.67■□□□□ 0.42
HDAC8-209ENST00000373589 PNMA5Q96PV4 448 aa17.67■□□□□ 0.42
HDAC8-209ENST00000373589 SLC38A10Q9HBR0 1119 aa17.67■□□□□ 0.42
HDAC8-209ENST00000373589 RMND1Q9NWS8 449 aa17.67■□□□□ 0.42
HDAC8-209ENST00000373589 PPP1R9AQ9ULJ8 1098 aa17.67■□□□□ 0.42
HDAC8-209ENST00000373589 PCDHA12Q9UN75 941 aa17.67■□□□□ 0.42
HDAC8-209ENST00000373589 GOLGA6L6A8MZA4 724 aa17.67■□□□□ 0.42
HDAC8-209ENST00000373589 PPP1R3GB7ZBB8 358 aa17.67■□□□□ 0.42
HDAC8-209ENST00000373589 FAM86B1E9PN63 330 aa17.67■□□□□ 0.42
HDAC8-209ENST00000373589 FAM86B2P0C5J1 330 aa17.67■□□□□ 0.42
HDAC8-209ENST00000373589 CD44P16070 742 aaKnown RBP17.67■□□□□ 0.42
HDAC8-209ENST00000373589 SEMA3FQ13275 785 aa17.67■□□□□ 0.42
HDAC8-209ENST00000373589 SAMD1Q6SPF0 538 aaPredicted RBP17.67■□□□□ 0.42
HDAC8-209ENST00000373589 SLFN12Q8IYM2 578 aa17.67■□□□□ 0.42
HDAC8-209ENST00000373589 GJA10Q969M2 543 aa17.67■□□□□ 0.42
HDAC8-209ENST00000373589 C12orf42Q96LP6 360 aa17.67■□□□□ 0.42
HDAC8-209ENST00000373589 AGBL1Q96MI9 1066 aa17.67■□□□□ 0.42
HDAC8-209ENST00000373589 KLRC4O43908 158 aa17.66■□□□□ 0.42
HDAC8-209ENST00000373589 KCNB1Q14721 858 aa17.66■□□□□ 0.42
HDAC8-209ENST00000373589 TMEM119Q4V9L6 283 aa17.66■□□□□ 0.42
HDAC8-209ENST00000373589 PRR16Q569H4 304 aa17.66■□□□□ 0.42
HDAC8-209ENST00000373589 KRT79Q5XKE5 535 aa17.66■□□□□ 0.42
HDAC8-209ENST00000373589 FCHSD1Q86WN1 690 aa17.66■□□□□ 0.42
HDAC8-209ENST00000373589 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.66■□□□□ 0.42
HDAC8-209ENST00000373589 NUDT12Q9BQG2 462 aa17.66■□□□□ 0.42
HDAC8-209ENST00000373589 TANGO6Q9C0B7 1094 aa17.66■□□□□ 0.42
HDAC8-209ENST00000373589 RPAP3Q9H6T3 665 aaPredicted RBP17.66■□□□□ 0.42
HDAC8-209ENST00000373589 BLOC1S4Q9NUP1 217 aa17.66■□□□□ 0.42
HDAC8-209ENST00000373589 FANCLQ9NW38 375 aa17.66■□□□□ 0.42
HDAC8-209ENST00000373589 STK17AQ9UEE5 414 aa17.66■□□□□ 0.42
HDAC8-209ENST00000373589 CCPG1Q9ULG6 757 aa17.66■□□□□ 0.42
HDAC8-209ENST00000373589 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.66■□□□□ 0.42
HDAC8-209ENST00000373589 MARCH6O60337 910 aa17.65■□□□□ 0.42
HDAC8-209ENST00000373589 FLOT1O75955 427 aa17.65■□□□□ 0.42
HDAC8-209ENST00000373589 TPM3P06753 285 aa17.65■□□□□ 0.42
HDAC8-209ENST00000373589 ATP1A3P13637 1013 aa17.65■□□□□ 0.42
HDAC8-209ENST00000373589 HSD17B4P51659 736 aa17.65■□□□□ 0.42
HDAC8-209ENST00000373589 GHRHRQ02643 423 aa17.65■□□□□ 0.42
HDAC8-209ENST00000373589 HYIQ5T013 277 aa17.65■□□□□ 0.42
HDAC8-209ENST00000373589 ZNF658Q5TYW1 1059 aaPredicted RBP17.65■□□□□ 0.42
HDAC8-209ENST00000373589 SNX29Q8TEQ0 813 aa17.65■□□□□ 0.42
HDAC8-209ENST00000373589 C7orf25Q9BPX7 421 aa17.65■□□□□ 0.42
HDAC8-209ENST00000373589 ZHX2Q9Y6X8 837 aa17.65■□□□□ 0.42
HDAC8-209ENST00000373589 C19orf81C9J6K1 198 aa17.64■□□□□ 0.41
HDAC8-209ENST00000373589 SLC26A4O43511 780 aa17.64■□□□□ 0.41
HDAC8-209ENST00000373589 USP2O75604 605 aaPredicted RBP17.64■□□□□ 0.41
HDAC8-209ENST00000373589 ZNF18P17022 549 aa17.64■□□□□ 0.41
HDAC8-209ENST00000373589 SMYD4Q8IYR2 804 aaPredicted RBP17.64■□□□□ 0.41
HDAC8-209ENST00000373589 CLEC4DQ8WXI8 215 aa17.64■□□□□ 0.41
HDAC8-209ENST00000373589 L3MBTL3Q96JM7 780 aaPredicted RBP17.64■□□□□ 0.41
HDAC8-209ENST00000373589 FAM20AQ96MK3 541 aa17.64■□□□□ 0.41
HDAC8-209ENST00000373589 TRIM9Q9C026 710 aa17.64■□□□□ 0.41
HDAC8-209ENST00000373589 NFE2L3Q9Y4A8 694 aa17.64■□□□□ 0.41
HDAC8-209ENST00000373589 PHIPQ8WWQ0 1821 aa17.64■□□□□ 0.41
HDAC8-209ENST00000373589 POLR2AP24928 1970 aaKnown RBP17.64■□□□□ 0.41
HDAC8-209ENST00000373589 IGLV3-22A0A075B6J6 115 aa17.64■□□□□ 0.41
HDAC8-209ENST00000373589 RHOBTB3O94955 611 aa17.64■□□□□ 0.41
HDAC8-209ENST00000373589 FDX1P10109 184 aa17.64■□□□□ 0.41
HDAC8-209ENST00000373589 FANCCQ00597 558 aa17.64■□□□□ 0.41
HDAC8-209ENST00000373589 SPIRE1Q08AE8 756 aa17.64■□□□□ 0.41
HDAC8-209ENST00000373589 DRC7Q8IY82 874 aa17.64■□□□□ 0.41
HDAC8-209ENST00000373589 TRMT44Q8IYL2 757 aaKnown RBP17.64■□□□□ 0.41
HDAC8-209ENST00000373589 DCPSQ96C86 337 aaKnown RBP17.64■□□□□ 0.41
HDAC8-209ENST00000373589 IFNKQ9P0W0 207 aa17.64■□□□□ 0.41
HDAC8-209ENST00000373589 MSH4O15457 936 aa17.63■□□□□ 0.41
HDAC8-209ENST00000373589 AMPD3Q01432 767 aa17.63■□□□□ 0.41
HDAC8-209ENST00000373589 ECM1Q16610 540 aa17.63■□□□□ 0.41
HDAC8-209ENST00000373589 KMT5BQ4FZB7 885 aa17.63■□□□□ 0.41
HDAC8-209ENST00000373589 CYP2W1Q8TAV3 490 aa17.63■□□□□ 0.41
HDAC8-209ENST00000373589 CDK5RAP3Q96JB5 506 aa17.63■□□□□ 0.41
HDAC8-209ENST00000373589 ZNF830Q96NB3 372 aaPredicted RBP17.63■□□□□ 0.41
HDAC8-209ENST00000373589 XPO4Q9C0E2 1151 aaKnown RBP17.63■□□□□ 0.41
HDAC8-209ENST00000373589 NRBP1Q9UHY1 535 aa17.63■□□□□ 0.41
HDAC8-209ENST00000373589 PNMA2Q9UL42 364 aa17.63■□□□□ 0.41
HDAC8-209ENST00000373589 AFG3L2Q9Y4W6 797 aa17.63■□□□□ 0.41
HDAC8-209ENST00000373589 MSNP26038 577 aaKnown RBP17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms