RNA–Protein interactions for RNA: ENST00000373433.8

RPRD1B-201, Transcript of regulation of nuclear pre-mRNA domain containing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPRD1B, Length 3,874 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1B-201ENST00000373433 FAM237AA0A1B0GTK4 181 aa12.41□□□□□ -0.42
RPRD1B-201ENST00000373433 AGPSO00116 658 aa12.41□□□□□ -0.42
RPRD1B-201ENST00000373433 PSMD14O00487 310 aa12.41□□□□□ -0.42
RPRD1B-201ENST00000373433 ZNF185O15231 689 aa12.41□□□□□ -0.42
RPRD1B-201ENST00000373433 IPO7O95373 1038 aaKnown RBP12.41□□□□□ -0.42
RPRD1B-201ENST00000373433 NOSTRINQ8IVI9 506 aa12.41□□□□□ -0.42
RPRD1B-201ENST00000373433 DIS3L2Q8IYB7 885 aaKnown RBP12.41□□□□□ -0.42
RPRD1B-201ENST00000373433 TRIML1Q8N9V2 468 aa12.41□□□□□ -0.42
RPRD1B-201ENST00000373433 JAKMIP2Q96AA8 810 aa12.41□□□□□ -0.42
RPRD1B-201ENST00000373433 ZNF408Q9H9D4 720 aa12.41□□□□□ -0.42
RPRD1B-201ENST00000373433 SENP2Q9HC62 589 aa12.41□□□□□ -0.42
RPRD1B-201ENST00000373433 EPN1Q9Y6I3 576 aaPredicted RBP12.41□□□□□ -0.42
RPRD1B-201ENST00000373433 C4BP0C0L5 1744 aa12.41□□□□□ -0.42
RPRD1B-201ENST00000373433 RNF225M0QZC1 329 aaPredicted RBP12.41□□□□□ -0.42
RPRD1B-201ENST00000373433 GDF11O95390 407 aa12.41□□□□□ -0.42
RPRD1B-201ENST00000373433 TBC1D10BQ4KMP7 808 aaPredicted RBP12.41□□□□□ -0.42
RPRD1B-201ENST00000373433 KCTD16Q68DU8 428 aa12.41□□□□□ -0.42
RPRD1B-201ENST00000373433 CCDC51Q96ER9 411 aa12.41□□□□□ -0.42
RPRD1B-201ENST00000373433 TANGO6Q9C0B7 1094 aa12.41□□□□□ -0.42
RPRD1B-201ENST00000373433 FLT1P17948 1338 aa12.41□□□□□ -0.42
RPRD1B-201ENST00000373433 SHOX2O60902 331 aaPredicted RBP12.4□□□□□ -0.42
RPRD1B-201ENST00000373433 EPS15P42566 896 aa12.4□□□□□ -0.42
RPRD1B-201ENST00000373433 CKAP4Q07065 602 aaKnown RBP12.4□□□□□ -0.42
RPRD1B-201ENST00000373433 MIGA2Q7L4E1 593 aa12.4□□□□□ -0.42
RPRD1B-201ENST00000373433 TRAPPC11Q7Z392 1133 aa12.4□□□□□ -0.42
RPRD1B-201ENST00000373433 VPS54Q9P1Q0 977 aa12.4□□□□□ -0.42
RPRD1B-201ENST00000373433 UBR2Q8IWV8 1755 aa12.4□□□□□ -0.42
RPRD1B-201ENST00000373433 APTXQ7Z2E3 356 aaKnown RBP12.4□□□□□ -0.42
RPRD1B-201ENST00000373433 PCDHB6Q9Y5E3 794 aa12.4□□□□□ -0.42
RPRD1B-201ENST00000373433 NDUFA10O95299 355 aa12.4□□□□□ -0.42
RPRD1B-201ENST00000373433 IDEP14735 1019 aa12.4□□□□□ -0.42
RPRD1B-201ENST00000373433 SARSP49591 514 aaKnown RBP12.4□□□□□ -0.42
RPRD1B-201ENST00000373433 ICA1Q05084 483 aa12.4□□□□□ -0.42
RPRD1B-201ENST00000373433 KANK3Q6NY19 840 aa12.4□□□□□ -0.42
RPRD1B-201ENST00000373433 CDC42EP5Q6NZY7 148 aa12.4□□□□□ -0.42
RPRD1B-201ENST00000373433 ENAHQ8N8S7 591 aaPredicted RBP12.4□□□□□ -0.42
RPRD1B-201ENST00000373433 CCDC17Q96LX7 622 aa12.4□□□□□ -0.42
RPRD1B-201ENST00000373433 CSRNP2Q9H175 543 aa12.4□□□□□ -0.42
RPRD1B-201ENST00000373433 ARHGEF10LQ9HCE6 1279 aa12.4□□□□□ -0.42
RPRD1B-201ENST00000373433 SWAP70Q9UH65 585 aa12.4□□□□□ -0.42
RPRD1B-201ENST00000373433 ZC3H4Q9UPT8 1303 aaKnown RBP12.4□□□□□ -0.43
RPRD1B-201ENST00000373433 KLRF2D3W0D1 207 aa12.39□□□□□ -0.43
RPRD1B-201ENST00000373433 KRT31Q15323 416 aa12.39□□□□□ -0.43
RPRD1B-201ENST00000373433 ABCB5Q2M3G0 1257 aa12.39□□□□□ -0.43
RPRD1B-201ENST00000373433 HHIPL2Q6UWX4 724 aa12.39□□□□□ -0.43
RPRD1B-201ENST00000373433 PLIN2Q99541 437 aa12.39□□□□□ -0.43
RPRD1B-201ENST00000373433 FBXO2Q9UK22 296 aaPredicted RBP12.39□□□□□ -0.43
RPRD1B-201ENST00000373433 PDE4DIPQ5VU43 2346 aa12.39□□□□□ -0.43
RPRD1B-201ENST00000373433 FRMPD2Q68DX3 1309 aaPredicted RBP12.39□□□□□ -0.43
RPRD1B-201ENST00000373433 MACROD2A1Z1Q3 448 aa12.39□□□□□ -0.43
RPRD1B-201ENST00000373433 PTPREP23469 700 aa12.39□□□□□ -0.43
RPRD1B-201ENST00000373433 CALML3P27482 149 aa12.39□□□□□ -0.43
RPRD1B-201ENST00000373433 PPP4CP60510 307 aa12.39□□□□□ -0.43
RPRD1B-201ENST00000373433 NR5A1Q13285 461 aa12.39□□□□□ -0.43
RPRD1B-201ENST00000373433 RSBN1LQ6PCB5 846 aaPredicted RBP12.39□□□□□ -0.43
RPRD1B-201ENST00000373433 CCNI2Q6ZMN8 369 aaPredicted RBP12.39□□□□□ -0.43
RPRD1B-201ENST00000373433 LY9Q9HBG7 655 aa12.39□□□□□ -0.43
RPRD1B-201ENST00000373433 MAPK8IP1Q9UQF2 711 aa12.39□□□□□ -0.43
RPRD1B-201ENST00000373433 PDS5AQ29RF7 1337 aaKnown RBP12.39□□□□□ -0.43
RPRD1B-201ENST00000373433 SHANK3Q9BYB0 1731 aa12.39□□□□□ -0.43
RPRD1B-201ENST00000373433 SCP2P22307 547 aa12.39□□□□□ -0.43
RPRD1B-201ENST00000373433 SP4Q02446 784 aa12.39□□□□□ -0.43
RPRD1B-201ENST00000373433 UBXN1Q04323 297 aa12.39□□□□□ -0.43
RPRD1B-201ENST00000373433 CEP57Q86XR8 500 aa12.39□□□□□ -0.43
RPRD1B-201ENST00000373433 CNPY4Q8N129 248 aa12.39□□□□□ -0.43
RPRD1B-201ENST00000373433 SH2D3CQ8N5H7 860 aa12.39□□□□□ -0.43
RPRD1B-201ENST00000373433 FAM205AQ6ZU69 1335 aa12.39□□□□□ -0.43
RPRD1B-201ENST00000373433 ACTN4O43707 911 aaKnown RBP12.38□□□□□ -0.43
RPRD1B-201ENST00000373433 NF2P35240 595 aa12.38□□□□□ -0.43
RPRD1B-201ENST00000373433 KRT2P35908 639 aa12.38□□□□□ -0.43
RPRD1B-201ENST00000373433 PBX1P40424 430 aa12.38□□□□□ -0.43
RPRD1B-201ENST00000373433 EAPPQ56P03 285 aaPredicted RBP12.38□□□□□ -0.43
RPRD1B-201ENST00000373433 C15orf52Q6ZUT6 534 aaKnown RBP12.38□□□□□ -0.43
RPRD1B-201ENST00000373433 B4GALNT4Q76KP1 1039 aa12.38□□□□□ -0.43
RPRD1B-201ENST00000373433 PSMB7Q99436 277 aa12.38□□□□□ -0.43
RPRD1B-201ENST00000373433 RTFDC1Q9BY42 306 aaPredicted RBP12.38□□□□□ -0.43
RPRD1B-201ENST00000373433 RNF181Q9P0P0 153 aa12.38□□□□□ -0.43
RPRD1B-201ENST00000373433 DDAH1O94760 285 aa12.38□□□□□ -0.43
RPRD1B-201ENST00000373433 SLC7A5Q01650 507 aa12.38□□□□□ -0.43
RPRD1B-201ENST00000373433 NT5DC1Q5TFE4 455 aa12.38□□□□□ -0.43
RPRD1B-201ENST00000373433 RRAGBQ5VZM2 374 aa12.38□□□□□ -0.43
RPRD1B-201ENST00000373433 EPSTI1Q96J88 318 aa12.38□□□□□ -0.43
RPRD1B-201ENST00000373433 HAUS4Q9H6D7 363 aa12.38□□□□□ -0.43
RPRD1B-201ENST00000373433 FAM184BQ9ULE4 1060 aa12.38□□□□□ -0.43
RPRD1B-201ENST00000373433 GRIN2DO15399 1336 aa12.38□□□□□ -0.43
RPRD1B-201ENST00000373433 KIF1CO43896 1103 aaKnown RBP12.38□□□□□ -0.43
RPRD1B-201ENST00000373433 OPA1O60313 960 aa12.38□□□□□ -0.43
RPRD1B-201ENST00000373433 TOB1P50616 345 aaPredicted RBP12.38□□□□□ -0.43
RPRD1B-201ENST00000373433 FBXL16Q8N461 479 aa12.38□□□□□ -0.43
RPRD1B-201ENST00000373433 PRPF38AQ8NAV1 312 aaKnown RBP12.38□□□□□ -0.43
RPRD1B-201ENST00000373433 CNKSR2Q8WXI2 1034 aa12.38□□□□□ -0.43
RPRD1B-201ENST00000373433 N4BP2L2Q92802 583 aaPredicted RBP12.38□□□□□ -0.43
RPRD1B-201ENST00000373433 SCAF8Q9UPN6 1271 aaKnown RBP12.38□□□□□ -0.43
RPRD1B-201ENST00000373433 ACTN3Q08043 901 aaPredicted RBP12.37□□□□□ -0.43
RPRD1B-201ENST00000373433 SBK1Q52WX2 424 aa12.37□□□□□ -0.43
RPRD1B-201ENST00000373433 DGKHQ86XP1 1220 aa12.37□□□□□ -0.43
RPRD1B-201ENST00000373433 ARL8AQ96BM9 186 aa12.37□□□□□ -0.43
RPRD1B-201ENST00000373433 BLZF1Q9H2G9 400 aa12.37□□□□□ -0.43
RPRD1B-201ENST00000373433 C6orf50Q9HD87 102 aa12.37□□□□□ -0.43
RPRD1B-201ENST00000373433 TARSL2A2RTX5 802 aaKnown RBP12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms