RNA–Protein interactions for RNA: ENST00000372621.8

CTPS1-202, Transcript of CTP synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTPS1, Length 3,201 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1-202ENST00000372621 CEP95Q96GE4 821 aa14.2□□□□□ -0.14
CTPS1-202ENST00000372621 CAPZA3Q96KX2 299 aa14.2□□□□□ -0.14
CTPS1-202ENST00000372621 TSGA10Q9BZW7 698 aa14.2□□□□□ -0.14
CTPS1-202ENST00000372621 BIN2Q9UBW5 565 aaPredicted RBP14.2□□□□□ -0.14
CTPS1-202ENST00000372621 STK17AQ9UEE5 414 aa14.2□□□□□ -0.14
CTPS1-202ENST00000372621 SEC63Q9UGP8 760 aaKnown RBP14.2□□□□□ -0.14
CTPS1-202ENST00000372621 MYH10P35580 1976 aa14.2□□□□□ -0.14
CTPS1-202ENST00000372621 IPO7O95373 1038 aaKnown RBP14.2□□□□□ -0.14
CTPS1-202ENST00000372621 CAPN2P17655 700 aa14.2□□□□□ -0.14
CTPS1-202ENST00000372621 FAM98CQ17RN3 349 aaKnown RBP14.2□□□□□ -0.14
CTPS1-202ENST00000372621 SV2BQ7L1I2 683 aa14.2□□□□□ -0.14
CTPS1-202ENST00000372621 ZNF572Q7Z3I7 529 aaPredicted RBP14.2□□□□□ -0.14
CTPS1-202ENST00000372621 SECISBP2LQ93073 1101 aaKnown RBP14.2□□□□□ -0.14
CTPS1-202ENST00000372621 GPR101Q96P66 508 aaPredicted RBP14.2□□□□□ -0.14
CTPS1-202ENST00000372621 TMEM260Q9NX78 707 aa14.2□□□□□ -0.14
CTPS1-202ENST00000372621 RHBDL3P58872 404 aa14.19□□□□□ -0.14
CTPS1-202ENST00000372621 EHHADHQ08426 723 aa14.19□□□□□ -0.14
CTPS1-202ENST00000372621 KIF5AQ12840 1032 aa14.19□□□□□ -0.14
CTPS1-202ENST00000372621 SOGA3Q5TF21 947 aa14.19□□□□□ -0.14
CTPS1-202ENST00000372621 KRT26Q7Z3Y9 468 aa14.19□□□□□ -0.14
CTPS1-202ENST00000372621 CCDC42Q96M95 316 aa14.19□□□□□ -0.14
CTPS1-202ENST00000372621 ACBD3Q9H3P7 528 aa14.19□□□□□ -0.14
CTPS1-202ENST00000372621 NDST4Q9H3R1 872 aa14.19□□□□□ -0.14
CTPS1-202ENST00000372621 LRWD1Q9UFC0 647 aa14.19□□□□□ -0.14
CTPS1-202ENST00000372621 HPCAL4Q9UM19 191 aa14.19□□□□□ -0.14
CTPS1-202ENST00000372621 hCG_1984214I3L0E3 225 aa14.19□□□□□ -0.14
CTPS1-202ENST00000372621 IDEP14735 1019 aa14.19□□□□□ -0.14
CTPS1-202ENST00000372621 TXKP42681 527 aa14.19□□□□□ -0.14
CTPS1-202ENST00000372621 MAP9Q49MG5 647 aa14.19□□□□□ -0.14
CTPS1-202ENST00000372621 FNBP4Q8N3X1 1017 aaPredicted RBP14.19□□□□□ -0.14
CTPS1-202ENST00000372621 GUF1Q8N442 669 aaKnown RBP14.19□□□□□ -0.14
CTPS1-202ENST00000372621 ZNF713Q8N859 430 aaPredicted RBP14.19□□□□□ -0.14
CTPS1-202ENST00000372621 CCDC102AQ96A19 550 aa14.19□□□□□ -0.14
CTPS1-202ENST00000372621 ZBTB9Q96C00 473 aa14.19□□□□□ -0.14
CTPS1-202ENST00000372621 PCMTD1Q96MG8 357 aaPredicted RBP14.19□□□□□ -0.14
CTPS1-202ENST00000372621 SH2D4AQ9H788 454 aa14.19□□□□□ -0.14
CTPS1-202ENST00000372621 RNF216Q9NWF9 866 aaPredicted RBP14.19□□□□□ -0.14
CTPS1-202ENST00000372621 MACROD2A1Z1Q3 448 aa14.19□□□□□ -0.14
CTPS1-202ENST00000372621 USP17L5A8MUK1 530 aa14.19□□□□□ -0.14
CTPS1-202ENST00000372621 PRPF6O94906 941 aaKnown RBP14.19□□□□□ -0.14
CTPS1-202ENST00000372621 HSP90B2PQ58FF3 399 aa14.19□□□□□ -0.14
CTPS1-202ENST00000372621 CREG2Q8IUH2 290 aa14.19□□□□□ -0.14
CTPS1-202ENST00000372621 COG1Q8WTW3 980 aa14.19□□□□□ -0.14
CTPS1-202ENST00000372621 SNX12Q9UMY4 172 aa14.19□□□□□ -0.14
CTPS1-202ENST00000372621 RTCBQ9Y3I0 505 aaKnown RBP14.19□□□□□ -0.14
CTPS1-202ENST00000372621 JRKLQ9Y4A0 524 aa14.19□□□□□ -0.14
CTPS1-202ENST00000372621 PLIN4Q96Q06 1357 aa14.18□□□□□ -0.14
CTPS1-202ENST00000372621 SLC37A4O43826 429 aa14.18□□□□□ -0.14
CTPS1-202ENST00000372621 CALCRLQ16602 461 aa14.18□□□□□ -0.14
CTPS1-202ENST00000372621 CCNI2Q6ZMN8 369 aaPredicted RBP14.18□□□□□ -0.14
CTPS1-202ENST00000372621 TEX11Q8IYF3 940 aa14.18□□□□□ -0.14
CTPS1-202ENST00000372621 TRIM58Q8NG06 486 aa14.18□□□□□ -0.14
CTPS1-202ENST00000372621 LARP4BQ92615 738 aaKnown RBP14.18□□□□□ -0.14
CTPS1-202ENST00000372621 FAM163AQ96GL9 167 aaPredicted RBP14.18□□□□□ -0.14
CTPS1-202ENST00000372621 VAT1LQ9HCJ6 419 aa14.18□□□□□ -0.14
CTPS1-202ENST00000372621 CD209Q9NNX6 404 aa14.18□□□□□ -0.14
CTPS1-202ENST00000372621 PCDHA13Q9Y5I0 950 aa14.18□□□□□ -0.14
CTPS1-202ENST00000372621 CAPN6Q9Y6Q1 641 aa14.18□□□□□ -0.14
CTPS1-202ENST00000372621 MYBL2P10244 700 aa14.18□□□□□ -0.14
CTPS1-202ENST00000372621 PDHBP11177 359 aa14.18□□□□□ -0.14
CTPS1-202ENST00000372621 IL1R1P14778 569 aa14.18□□□□□ -0.14
CTPS1-202ENST00000372621 PRLRP16471 622 aa14.18□□□□□ -0.14
CTPS1-202ENST00000372621 ITIH3Q06033 890 aa14.18□□□□□ -0.14
CTPS1-202ENST00000372621 PDIA5Q14554 519 aa14.18□□□□□ -0.14
CTPS1-202ENST00000372621 MAN2A1Q16706 1144 aa14.18□□□□□ -0.14
CTPS1-202ENST00000372621 FOXR2Q6PJQ5 311 aa14.18□□□□□ -0.14
CTPS1-202ENST00000372621 LRRC55Q6ZSA7 311 aa14.18□□□□□ -0.14
CTPS1-202ENST00000372621 UBA5Q9GZZ9 404 aa14.18□□□□□ -0.14
CTPS1-202ENST00000372621 GPSM2P81274 684 aa14.17□□□□□ -0.14
CTPS1-202ENST00000372621 LRRC63Q05C16 580 aa14.17□□□□□ -0.14
CTPS1-202ENST00000372621 SPA17Q15506 151 aa14.17□□□□□ -0.14
CTPS1-202ENST00000372621 SMCR8Q8TEV9 937 aaPredicted RBP14.17□□□□□ -0.14
CTPS1-202ENST00000372621 BAP1Q92560 729 aa14.17□□□□□ -0.14
CTPS1-202ENST00000372621 RAD54LQ92698 747 aa14.17□□□□□ -0.14
CTPS1-202ENST00000372621 LY75O60449 1722 aa14.17□□□□□ -0.14
CTPS1-202ENST00000372621 KIF11P52732 1056 aa14.17□□□□□ -0.14
CTPS1-202ENST00000372621 C2CD5Q86YS7 1000 aa14.17□□□□□ -0.14
CTPS1-202ENST00000372621 MMGT1Q8N4V1 131 aa14.17□□□□□ -0.14
CTPS1-202ENST00000372621 IFIH1Q9BYX4 1025 aaKnown RBP14.17□□□□□ -0.14
CTPS1-202ENST00000372621 JADE2Q9NQC1 790 aa14.17□□□□□ -0.14
CTPS1-202ENST00000372621 PHACTR2O75167 634 aa14.17□□□□□ -0.14
CTPS1-202ENST00000372621 TDP2O95551 362 aa14.17□□□□□ -0.14
CTPS1-202ENST00000372621 HOXA7P31268 230 aaPredicted RBP14.17□□□□□ -0.14
CTPS1-202ENST00000372621 ASTE1Q2TB18 679 aaPredicted RBP14.17□□□□□ -0.14
CTPS1-202ENST00000372621 TMEM119Q4V9L6 283 aa14.17□□□□□ -0.14
CTPS1-202ENST00000372621 CCDC84Q86UT8 332 aaPredicted RBP14.17□□□□□ -0.14
CTPS1-202ENST00000372621 NUDT12Q9BQG2 462 aa14.17□□□□□ -0.14
CTPS1-202ENST00000372621 FAM207AQ9NSI2 230 aaPredicted RBP14.17□□□□□ -0.14
CTPS1-202ENST00000372621 GAKO14976 1311 aa14.16□□□□□ -0.14
CTPS1-202ENST00000372621 RNF40O75150 1001 aa14.16□□□□□ -0.14
CTPS1-202ENST00000372621 SNHG28P0DPA3 235 aa14.16□□□□□ -0.14
CTPS1-202ENST00000372621 PLCG2P16885 1265 aa14.16□□□□□ -0.14
CTPS1-202ENST00000372621 C2orf54Q08AI8 447 aa14.16□□□□□ -0.14
CTPS1-202ENST00000372621 CCDC96Q2M329 555 aa14.16□□□□□ -0.14
CTPS1-202ENST00000372621 FAM204AQ9H8W3 233 aa14.16□□□□□ -0.14
CTPS1-202ENST00000372621 CWC15Q9P013 229 aaKnown RBP14.16□□□□□ -0.14
CTPS1-202ENST00000372621 MYH7BA7E2Y1 1941 aa14.16□□□□□ -0.14
CTPS1-202ENST00000372621 PJA2O43164 708 aa14.16□□□□□ -0.14
CTPS1-202ENST00000372621 USO1O60763 962 aaKnown RBP14.16□□□□□ -0.14
CTPS1-202ENST00000372621 ZMYND10O75800 440 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms