RNA–Protein interactions for RNA: ENST00000372547.5

SNX21-205, Transcript of sorting nexin family member 21, humanhuman

TSL 1 (best)

Gene SNX21, Length 2,794 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21-205ENST00000372547 HEATR3Q7Z4Q2 680 aa13.26□□□□□ -0.29
SNX21-205ENST00000372547 FAM114A1Q8IWE2 563 aa13.26□□□□□ -0.29
SNX21-205ENST00000372547 NOC3LQ8WTT2 800 aaKnown RBP13.26□□□□□ -0.29
SNX21-205ENST00000372547 SCLT1Q96NL6 688 aa13.26□□□□□ -0.29
SNX21-205ENST00000372547 BICDL2A1A5D9 508 aa13.26□□□□□ -0.29
SNX21-205ENST00000372547 TSPY2A6NKD2 308 aa13.26□□□□□ -0.29
SNX21-205ENST00000372547 EPB41P11171 864 aaKnown RBP13.26□□□□□ -0.29
SNX21-205ENST00000372547 PTGISQ16647 500 aa13.26□□□□□ -0.29
SNX21-205ENST00000372547 DYMQ7RTS9 669 aa13.26□□□□□ -0.29
SNX21-205ENST00000372547 TEX2Q8IWB9 1127 aa13.26□□□□□ -0.29
SNX21-205ENST00000372547 C4orf32Q8N8J7 132 aa13.26□□□□□ -0.29
SNX21-205ENST00000372547 DHTKD1Q96HY7 919 aaPredicted RBP13.26□□□□□ -0.29
SNX21-205ENST00000372547 NOX5Q96PH1 765 aa13.26□□□□□ -0.29
SNX21-205ENST00000372547 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.26□□□□□ -0.29
SNX21-205ENST00000372547 PLAGL2Q9UPG8 496 aa13.26□□□□□ -0.29
SNX21-205ENST00000372547 PLAAQ9Y263 795 aa13.26□□□□□ -0.29
SNX21-205ENST00000372547 LMTK3Q96Q04 1460 aa13.26□□□□□ -0.29
SNX21-205ENST00000372547 GOLGA6L7A0A1B0GV03 622 aa13.26□□□□□ -0.29
SNX21-205ENST00000372547 GOLGA6L10A6NI86 522 aa13.26□□□□□ -0.29
SNX21-205ENST00000372547 TRAPPC10P48553 1259 aa13.26□□□□□ -0.29
SNX21-205ENST00000372547 EHHADHQ08426 723 aa13.26□□□□□ -0.29
SNX21-205ENST00000372547 PAK2Q13177 524 aa13.26□□□□□ -0.29
SNX21-205ENST00000372547 PFKFB3Q16875 520 aaPredicted RBP13.26□□□□□ -0.29
SNX21-205ENST00000372547 CCDC40Q4G0X9 1142 aa13.26□□□□□ -0.29
SNX21-205ENST00000372547 ARL6IP4Q66PJ3 421 aaKnown RBP13.26□□□□□ -0.29
SNX21-205ENST00000372547 CABP7Q86V35 215 aa13.26□□□□□ -0.29
SNX21-205ENST00000372547 CCDC13Q8IYE1 715 aa13.26□□□□□ -0.29
SNX21-205ENST00000372547 MYCBPAPQ8TBZ2 947 aa13.26□□□□□ -0.29
SNX21-205ENST00000372547 CAVIN3Q969G5 261 aa13.26□□□□□ -0.29
SNX21-205ENST00000372547 KLC4Q9NSK0 619 aa13.26□□□□□ -0.29
SNX21-205ENST00000372547 SUFUQ9UMX1 484 aa13.26□□□□□ -0.29
SNX21-205ENST00000372547 FAM170AA1A519 330 aa13.25□□□□□ -0.29
SNX21-205ENST00000372547 MDH1P40925 334 aaKnown RBP13.25□□□□□ -0.29
SNX21-205ENST00000372547 KCNB1Q14721 858 aa13.25□□□□□ -0.29
SNX21-205ENST00000372547 KLHDC7AQ5VTJ3 777 aa13.25□□□□□ -0.29
SNX21-205ENST00000372547 KDM7AQ6ZMT4 941 aa13.25□□□□□ -0.29
SNX21-205ENST00000372547 CASKIN2Q8WXE0 1202 aa13.25□□□□□ -0.29
SNX21-205ENST00000372547 ZKSCAN4Q969J2 545 aaPredicted RBP13.25□□□□□ -0.29
SNX21-205ENST00000372547 NDST4Q9H3R1 872 aa13.25□□□□□ -0.29
SNX21-205ENST00000372547 ZBTB1Q9Y2K1 713 aa13.25□□□□□ -0.29
SNX21-205ENST00000372547 FRMD3A2A2Y4 597 aa13.25□□□□□ -0.29
SNX21-205ENST00000372547 PALMO75781 387 aa13.25□□□□□ -0.29
SNX21-205ENST00000372547 FSBPO95073 299 aa13.25□□□□□ -0.29
SNX21-205ENST00000372547 CYP2D6P10635 497 aa13.25□□□□□ -0.29
SNX21-205ENST00000372547 TMOD1P28289 359 aa13.25□□□□□ -0.29
SNX21-205ENST00000372547 E2F5Q15329 346 aa13.25□□□□□ -0.29
SNX21-205ENST00000372547 TXNRD1Q16881 649 aa13.25□□□□□ -0.29
SNX21-205ENST00000372547 LETM2Q2VYF4 491 aa13.25□□□□□ -0.29
SNX21-205ENST00000372547 CCDC121Q6ZUS5 278 aa13.25□□□□□ -0.29
SNX21-205ENST00000372547 STAG2Q8N3U4 1231 aa13.25□□□□□ -0.29
SNX21-205ENST00000372547 KANSL2Q9H9L4 492 aa13.25□□□□□ -0.29
SNX21-205ENST00000372547 TCP11L1Q9NUJ3 509 aa13.25□□□□□ -0.29
SNX21-205ENST00000372547 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.25□□□□□ -0.29
SNX21-205ENST00000372547 TECP42680 631 aa13.24□□□□□ -0.29
SNX21-205ENST00000372547 EVA1CP58658 441 aa13.24□□□□□ -0.29
SNX21-205ENST00000372547 VWA3BQ502W6 1294 aa13.24□□□□□ -0.29
SNX21-205ENST00000372547 IQCKQ8N0W5 287 aa13.24□□□□□ -0.29
SNX21-205ENST00000372547 ATP6V1G3Q96LB4 118 aa13.24□□□□□ -0.29
SNX21-205ENST00000372547 CPVLQ9H3G5 476 aa13.24□□□□□ -0.29
SNX21-205ENST00000372547 GOLPH3Q9H4A6 298 aa13.24□□□□□ -0.29
SNX21-205ENST00000372547 KBTBD4Q9NVX7 518 aa13.24□□□□□ -0.29
SNX21-205ENST00000372547 JAG2Q9Y219 1238 aa13.24□□□□□ -0.29
SNX21-205ENST00000372547 KCPQ6ZWJ8 1503 aa13.24□□□□□ -0.29
SNX21-205ENST00000372547 DDAH1O94760 285 aa13.24□□□□□ -0.29
SNX21-205ENST00000372547 PDHBP11177 359 aa13.24□□□□□ -0.29
SNX21-205ENST00000372547 LRRC41Q15345 812 aa13.24□□□□□ -0.29
SNX21-205ENST00000372547 DDX42Q86XP3 938 aaKnown RBP eCLIP13.24□□□□□ -0.29
SNX21-205ENST00000372547 DZIP3Q86Y13 1208 aaKnown RBP13.24□□□□□ -0.29
SNX21-205ENST00000372547 N4BP2L2Q92802 583 aaPredicted RBP13.24□□□□□ -0.29
SNX21-205ENST00000372547 ERGIC2Q96RQ1 377 aa13.24□□□□□ -0.29
SNX21-205ENST00000372547 MTA3Q9BTC8 594 aa13.24□□□□□ -0.29
SNX21-205ENST00000372547 TRIM9Q9C026 710 aa13.24□□□□□ -0.29
SNX21-205ENST00000372547 SEMA6BQ9H3T3 888 aa13.24□□□□□ -0.29
SNX21-205ENST00000372547 STRCP1A6NGW2 1772 aa13.23□□□□□ -0.29
SNX21-205ENST00000372547 ZNF335Q9H4Z2 1342 aaPredicted RBP13.23□□□□□ -0.29
SNX21-205ENST00000372547 CCNT1O60563 726 aaKnown RBP13.23□□□□□ -0.29
SNX21-205ENST00000372547 IL2RBP14784 551 aa13.23□□□□□ -0.29
SNX21-205ENST00000372547 SCP2P22307 547 aa13.23□□□□□ -0.29
SNX21-205ENST00000372547 CALML3P27482 149 aa13.23□□□□□ -0.29
SNX21-205ENST00000372547 NF2P35240 595 aa13.23□□□□□ -0.29
SNX21-205ENST00000372547 DNAAF5Q86Y56 855 aa13.23□□□□□ -0.29
SNX21-205ENST00000372547 PIK3R5Q8WYR1 880 aa13.23□□□□□ -0.29
SNX21-205ENST00000372547 PIGBQ92521 554 aa13.23□□□□□ -0.29
SNX21-205ENST00000372547 SLC40A1Q9NP59 571 aa13.23□□□□□ -0.29
SNX21-205ENST00000372547 PCDHA4Q9UN74 947 aa13.23□□□□□ -0.29
SNX21-205ENST00000372547 BAZ2AQ9UIF9 1905 aaKnown RBP13.23□□□□□ -0.29
SNX21-205ENST00000372547 PRLRP16471 622 aa13.23□□□□□ -0.29
SNX21-205ENST00000372547 IGHMBP2P38935 993 aaKnown RBP13.23□□□□□ -0.29
SNX21-205ENST00000372547 BANK1Q8NDB2 785 aa13.23□□□□□ -0.29
SNX21-205ENST00000372547 VCPKMTQ9H867 229 aa13.23□□□□□ -0.29
SNX21-205ENST00000372547 PARP4Q9UKK3 1724 aaKnown RBP13.23□□□□□ -0.29
SNX21-205ENST00000372547 ALS2Q96Q42 1657 aa13.23□□□□□ -0.29
SNX21-205ENST00000372547 A6NNZ2 444 aa13.22□□□□□ -0.29
SNX21-205ENST00000372547 CHUKO15111 745 aa13.22□□□□□ -0.29
SNX21-205ENST00000372547 RAD51CO43502 376 aa13.22□□□□□ -0.29
SNX21-205ENST00000372547 TUBB8Q3ZCM7 444 aa13.22□□□□□ -0.29
SNX21-205ENST00000372547 KIRREL3Q8IZU9 778 aa13.22□□□□□ -0.29
SNX21-205ENST00000372547 KIAA0895Q8NCT3 520 aa13.22□□□□□ -0.29
SNX21-205ENST00000372547 UBLCP1Q8WVY7 318 aaPredicted RBP13.22□□□□□ -0.29
SNX21-205ENST00000372547 CYFIP2Q96F07 1278 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms