RNA–Protein interactions for RNA: ENST00000372232.7

ATG4A-203, Transcript of autophagy related 4A cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4A, Length 2,315 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-203ENST00000372232 LLPHQ9BRT6 129 aaKnown RBP9.84□□□□□ -0.83
ATG4A-203ENST00000372232 CNNM1Q9NRU3 951 aa9.84□□□□□ -0.83
ATG4A-203ENST00000372232 IFNKQ9P0W0 207 aa9.84□□□□□ -0.83
ATG4A-203ENST00000372232 CDC23Q9UJX2 597 aa9.84□□□□□ -0.83
ATG4A-203ENST00000372232 SLC27A5Q9Y2P5 690 aa9.84□□□□□ -0.83
ATG4A-203ENST00000372232 UBN2Q6ZU65 1347 aa9.84□□□□□ -0.83
ATG4A-203ENST00000372232 PLCH1Q4KWH8 1693 aa9.83□□□□□ -0.84
ATG4A-203ENST00000372232 GOLGA6L7A0A1B0GV03 622 aa9.83□□□□□ -0.84
ATG4A-203ENST00000372232 GOLGA6CA6NDK9 693 aa9.83□□□□□ -0.84
ATG4A-203ENST00000372232 RNF8O76064 485 aa9.83□□□□□ -0.84
ATG4A-203ENST00000372232 GOLGA6DP0CG33 693 aa9.83□□□□□ -0.84
ATG4A-203ENST00000372232 RRP12Q5JTH9 1297 aaKnown RBP9.83□□□□□ -0.84
ATG4A-203ENST00000372232 FAM173BQ6P4H8 233 aa9.83□□□□□ -0.84
ATG4A-203ENST00000372232 PI16Q6UXB8 463 aa9.83□□□□□ -0.84
ATG4A-203ENST00000372232 TRIM50Q86XT4 487 aa9.83□□□□□ -0.84
ATG4A-203ENST00000372232 CCDC170Q8IYT3 715 aa9.83□□□□□ -0.84
ATG4A-203ENST00000372232 SMARCC2Q8TAQ2 1214 aa9.83□□□□□ -0.84
ATG4A-203ENST00000372232 RBM41Q96IZ5 413 aaKnown RBP9.83□□□□□ -0.84
ATG4A-203ENST00000372232 ZNF512BQ96KM6 892 aaPredicted RBP9.83□□□□□ -0.84
ATG4A-203ENST00000372232 BPIFA3Q9BQP9 254 aa9.83□□□□□ -0.84
ATG4A-203ENST00000372232 YIPF2Q9BWQ6 316 aa9.83□□□□□ -0.84
ATG4A-203ENST00000372232 TGIF2Q9GZN2 237 aa9.83□□□□□ -0.84
ATG4A-203ENST00000372232 MMADHCQ9H3L0 296 aaPredicted RBP9.83□□□□□ -0.84
ATG4A-203ENST00000372232 GOLGA6AQ9NYA3 693 aa9.83□□□□□ -0.84
ATG4A-203ENST00000372232 SPATA31A1Q5TZJ5 1347 aa9.83□□□□□ -0.84
ATG4A-203ENST00000372232 NDUFAB1O14561 156 aa9.83□□□□□ -0.84
ATG4A-203ENST00000372232 TPD52L2O43399 206 aaKnown RBP9.83□□□□□ -0.84
ATG4A-203ENST00000372232 PDE8BO95263 885 aa9.83□□□□□ -0.84
ATG4A-203ENST00000372232 MCAMP43121 646 aa9.83□□□□□ -0.84
ATG4A-203ENST00000372232 SKOR1P84550 965 aa9.83□□□□□ -0.84
ATG4A-203ENST00000372232 TCEAL1Q15170 157 aa9.83□□□□□ -0.84
ATG4A-203ENST00000372232 DDB1Q16531 1140 aa9.83□□□□□ -0.84
ATG4A-203ENST00000372232 CDC37Q16543 378 aaPredicted RBP9.83□□□□□ -0.84
ATG4A-203ENST00000372232 INTS5Q6P9B9 1019 aaKnown RBP9.83□□□□□ -0.84
ATG4A-203ENST00000372232 TMEM139Q8IV31 216 aa9.83□□□□□ -0.84
ATG4A-203ENST00000372232 TSEN2Q8NCE0 465 aaKnown RBP9.83□□□□□ -0.84
ATG4A-203ENST00000372232 APPBP2Q92624 585 aa9.83□□□□□ -0.84
ATG4A-203ENST00000372232 BICD1Q96G01 975 aa9.83□□□□□ -0.84
ATG4A-203ENST00000372232 SCLT1Q96NL6 688 aa9.83□□□□□ -0.84
ATG4A-203ENST00000372232 YIPF3Q9GZM5 350 aa9.83□□□□□ -0.84
ATG4A-203ENST00000372232 PUS7LQ9H0K6 701 aaKnown RBP9.83□□□□□ -0.84
ATG4A-203ENST00000372232 PAPOLBQ9NRJ5 636 aaKnown RBP9.83□□□□□ -0.84
ATG4A-203ENST00000372232 KIAA1468Q9P260 1216 aa9.83□□□□□ -0.84
ATG4A-203ENST00000372232 THRAP3Q9Y2W1 955 aaKnown RBP9.83□□□□□ -0.84
ATG4A-203ENST00000372232 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.83□□□□□ -0.84
ATG4A-203ENST00000372232 TREHO43280 583 aa9.82□□□□□ -0.84
ATG4A-203ENST00000372232 MGRN1O60291 552 aa9.82□□□□□ -0.84
ATG4A-203ENST00000372232 LDHBP07195 334 aaKnown RBP9.82□□□□□ -0.84
ATG4A-203ENST00000372232 FMR1Q06787 632 aaKnown RBP eCLIP9.82□□□□□ -0.84
ATG4A-203ENST00000372232 STIM1Q13586 685 aa9.82□□□□□ -0.84
ATG4A-203ENST00000372232 DBN1Q16643 649 aa9.82□□□□□ -0.84
ATG4A-203ENST00000372232 FBXL16Q8N461 479 aa9.82□□□□□ -0.84
ATG4A-203ENST00000372232 RASSF8Q8NHQ8 419 aa9.82□□□□□ -0.84
ATG4A-203ENST00000372232 CCDC12Q8WUD4 166 aaPredicted RBP9.82□□□□□ -0.84
ATG4A-203ENST00000372232 RNF34Q969K3 372 aa9.82□□□□□ -0.84
ATG4A-203ENST00000372232 CCDC114Q96M63 670 aa9.82□□□□□ -0.84
ATG4A-203ENST00000372232 GORASP1Q9BQQ3 440 aa9.82□□□□□ -0.84
ATG4A-203ENST00000372232 PUF60Q9UHX1 559 aaKnown RBP9.82□□□□□ -0.84
ATG4A-203ENST00000372232 NUB1Q9Y5A7 615 aa9.82□□□□□ -0.84
ATG4A-203ENST00000372232 GOLGA6BA6NDN3 693 aa9.82□□□□□ -0.84
ATG4A-203ENST00000372232 A6NHS1 94 aa9.82□□□□□ -0.84
ATG4A-203ENST00000372232 FGAP02671 866 aa9.82□□□□□ -0.84
ATG4A-203ENST00000372232 LINGO3P0C6S8 592 aa9.82□□□□□ -0.84
ATG4A-203ENST00000372232 EVX2Q03828 476 aa9.82□□□□□ -0.84
ATG4A-203ENST00000372232 ACCSLQ4AC99 568 aa9.82□□□□□ -0.84
ATG4A-203ENST00000372232 LRRC23Q53EV4 343 aaPredicted RBP9.82□□□□□ -0.84
ATG4A-203ENST00000372232 ACBD5Q5T8D3 534 aaPredicted RBP9.82□□□□□ -0.84
ATG4A-203ENST00000372232 MEX3CQ5U5Q3 659 aaKnown RBP9.82□□□□□ -0.84
ATG4A-203ENST00000372232 PPP1R18Q6NYC8 613 aa9.82□□□□□ -0.84
ATG4A-203ENST00000372232 GALNT15Q8N3T1 639 aa9.82□□□□□ -0.84
ATG4A-203ENST00000372232 NSUN7Q8NE18 718 aaKnown RBP9.82□□□□□ -0.84
ATG4A-203ENST00000372232 COG1Q8WTW3 980 aa9.82□□□□□ -0.84
ATG4A-203ENST00000372232 NSMCE1Q8WV22 266 aa9.82□□□□□ -0.84
ATG4A-203ENST00000372232 AGPSO00116 658 aa9.81□□□□□ -0.84
ATG4A-203ENST00000372232 CTDNEP1O95476 244 aa9.81□□□□□ -0.84
ATG4A-203ENST00000372232 RHOXF2BP0C7M4 288 aa9.81□□□□□ -0.84
ATG4A-203ENST00000372232 PAX3P23760 479 aa9.81□□□□□ -0.84
ATG4A-203ENST00000372232 GGCXP38435 758 aa9.81□□□□□ -0.84
ATG4A-203ENST00000372232 RESTQ13127 1097 aa9.81□□□□□ -0.84
ATG4A-203ENST00000372232 IMMTQ16891 758 aaKnown RBP9.81□□□□□ -0.84
ATG4A-203ENST00000372232 TAX1BP1Q86VP1 789 aa9.81□□□□□ -0.84
ATG4A-203ENST00000372232 JAZF1Q86VZ6 243 aa9.81□□□□□ -0.84
ATG4A-203ENST00000372232 DTNBP1Q96EV8 351 aa9.81□□□□□ -0.84
ATG4A-203ENST00000372232 ZNF274Q96GC6 653 aaPredicted RBP9.81□□□□□ -0.84
ATG4A-203ENST00000372232 RHOXF2Q9BQY4 288 aa9.81□□□□□ -0.84
ATG4A-203ENST00000372232 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.81□□□□□ -0.84
ATG4A-203ENST00000372232 CCDC87Q9NVE4 849 aa9.81□□□□□ -0.84
ATG4A-203ENST00000372232 VTI1BQ9UEU0 232 aa9.81□□□□□ -0.84
ATG4A-203ENST00000372232 DMGDHQ9UI17 866 aaKnown RBP9.81□□□□□ -0.84
ATG4A-203ENST00000372232 PCDHGB7Q9Y5F8 929 aa9.81□□□□□ -0.84
ATG4A-203ENST00000372232 KAT6BQ8WYB5 2073 aa9.81□□□□□ -0.84
ATG4A-203ENST00000372232 H3BQV1 296 aa9.81□□□□□ -0.84
ATG4A-203ENST00000372232 GPAA1O43292 621 aa9.81□□□□□ -0.84
ATG4A-203ENST00000372232 MPSTP25325 297 aa9.81□□□□□ -0.84
ATG4A-203ENST00000372232 PDIA3P30101 505 aaKnown RBP9.81□□□□□ -0.84
ATG4A-203ENST00000372232 CRKLP46109 303 aaKnown RBP9.81□□□□□ -0.84
ATG4A-203ENST00000372232 MAP7D1Q3KQU3 841 aa9.81□□□□□ -0.84
ATG4A-203ENST00000372232 IFFO2Q5TF58 517 aa9.81□□□□□ -0.84
ATG4A-203ENST00000372232 SUSD4Q5VX71 490 aa9.81□□□□□ -0.84
ATG4A-203ENST00000372232 BLOC1S3Q6QNY0 202 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms