RNA–Protein interactions for RNA: ENST00000372192.3

PTCH2-201, Transcript of patched 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTCH2, Length 4,225 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2-201ENST00000372192 MEGF6O75095 1541 aa12.58□□□□□ -0.39
PTCH2-201ENST00000372192 GSTTP1A0A1W2PQM5 241 aa12.58□□□□□ -0.39
PTCH2-201ENST00000372192 KRIT1O00522 736 aa12.58□□□□□ -0.39
PTCH2-201ENST00000372192 EPB41P11171 864 aaKnown RBP12.58□□□□□ -0.39
PTCH2-201ENST00000372192 LRRC63Q05C16 580 aa12.58□□□□□ -0.39
PTCH2-201ENST00000372192 DAAM2Q86T65 1068 aa12.58□□□□□ -0.39
PTCH2-201ENST00000372192 MAPKAPK5Q8IW41 473 aa12.58□□□□□ -0.39
PTCH2-201ENST00000372192 MSL3Q8N5Y2 521 aaKnown RBP12.58□□□□□ -0.39
PTCH2-201ENST00000372192 TULP2O00295 520 aa12.58□□□□□ -0.4
PTCH2-201ENST00000372192 NMT2O60551 498 aa12.58□□□□□ -0.4
PTCH2-201ENST00000372192 IRAK1P51617 712 aa12.58□□□□□ -0.4
PTCH2-201ENST00000372192 SMCR8Q8TEV9 937 aaPredicted RBP12.58□□□□□ -0.4
PTCH2-201ENST00000372192 EYA3Q99504 573 aa12.58□□□□□ -0.4
PTCH2-201ENST00000372192 CCSER1Q9C0I3 900 aa12.58□□□□□ -0.4
PTCH2-201ENST00000372192 RHOBTB3O94955 611 aa12.58□□□□□ -0.4
PTCH2-201ENST00000372192 TFRCP02786 760 aaKnown RBP12.58□□□□□ -0.4
PTCH2-201ENST00000372192 GKAP1Q5VSY0 366 aaPredicted RBP12.58□□□□□ -0.4
PTCH2-201ENST00000372192 PAPD7Q5XG87 772 aaKnown RBP12.58□□□□□ -0.4
PTCH2-201ENST00000372192 RNF10Q8N5U6 811 aaKnown RBP12.58□□□□□ -0.4
PTCH2-201ENST00000372192 RPGRQ92834 1020 aaKnown RBP12.58□□□□□ -0.4
PTCH2-201ENST00000372192 CUL5Q93034 780 aa12.58□□□□□ -0.4
PTCH2-201ENST00000372192 GPCPD1Q9NPB8 672 aa12.58□□□□□ -0.4
PTCH2-201ENST00000372192 TFR2Q9UP52 801 aa12.58□□□□□ -0.4
PTCH2-201ENST00000372192 PDS5AQ29RF7 1337 aaKnown RBP12.58□□□□□ -0.4
PTCH2-201ENST00000372192 LRRC53A6NM62 1247 aa12.58□□□□□ -0.4
PTCH2-201ENST00000372192 HMGB1P1B2RPK0 211 aaPredicted RBP12.58□□□□□ -0.4
PTCH2-201ENST00000372192 SEPT7Q16181 437 aaKnown RBP12.58□□□□□ -0.4
PTCH2-201ENST00000372192 TBCKQ8TEA7 893 aa12.58□□□□□ -0.4
PTCH2-201ENST00000372192 CTNNBL1Q8WYA6 563 aaPredicted RBP12.58□□□□□ -0.4
PTCH2-201ENST00000372192 DNAJC7Q99615 494 aa12.58□□□□□ -0.4
PTCH2-201ENST00000372192 NBPF3Q9H094 633 aa12.58□□□□□ -0.4
PTCH2-201ENST00000372192 SERPING1P05155 500 aa12.57□□□□□ -0.4
PTCH2-201ENST00000372192 VIMP08670 466 aaKnown RBP12.57□□□□□ -0.4
PTCH2-201ENST00000372192 HAUS3Q68CZ6 603 aa12.57□□□□□ -0.4
PTCH2-201ENST00000372192 FMNL3Q8IVF7 1028 aa12.57□□□□□ -0.4
PTCH2-201ENST00000372192 SYCP3Q8IZU3 236 aa12.57□□□□□ -0.4
PTCH2-201ENST00000372192 PLVAPQ9BX97 442 aa12.57□□□□□ -0.4
PTCH2-201ENST00000372192 PANK4Q9NVE7 773 aa12.57□□□□□ -0.4
PTCH2-201ENST00000372192 COL4A3BPQ9Y5P4 624 aa12.57□□□□□ -0.4
PTCH2-201ENST00000372192 C1orf167Q5SNV9 1468 aa12.57□□□□□ -0.4
PTCH2-201ENST00000372192 A0A1B0GUA9 196 aa12.57□□□□□ -0.4
PTCH2-201ENST00000372192 EIF3HO15372 352 aaKnown RBP eCLIP12.57□□□□□ -0.4
PTCH2-201ENST00000372192 LRRC41Q15345 812 aa12.57□□□□□ -0.4
PTCH2-201ENST00000372192 ANKRD40Q6AI12 368 aa12.57□□□□□ -0.4
PTCH2-201ENST00000372192 HS2ST1Q7LGA3 356 aa12.57□□□□□ -0.4
PTCH2-201ENST00000372192 RAB17Q9H0T7 212 aa12.57□□□□□ -0.4
PTCH2-201ENST00000372192 LCMT1Q9UIC8 334 aa12.57□□□□□ -0.4
PTCH2-201ENST00000372192 HLA-DOAP06340 250 aa12.57□□□□□ -0.4
PTCH2-201ENST00000372192 PICALMQ13492 652 aa12.57□□□□□ -0.4
PTCH2-201ENST00000372192 GIMAP8Q8ND71 665 aaPredicted RBP12.57□□□□□ -0.4
PTCH2-201ENST00000372192 A0A0U1RQJ8 604 aa12.56□□□□□ -0.4
PTCH2-201ENST00000372192 LRRC10BA6NIK2 292 aa12.56□□□□□ -0.4
PTCH2-201ENST00000372192 C6orf229H3BNL8 230 aa12.56□□□□□ -0.4
PTCH2-201ENST00000372192 CALUO43852 315 aaPredicted RBP12.56□□□□□ -0.4
PTCH2-201ENST00000372192 TROAPQ12815 778 aa12.56□□□□□ -0.4
PTCH2-201ENST00000372192 TXNRD1Q16881 649 aa12.56□□□□□ -0.4
PTCH2-201ENST00000372192 LRP10Q7Z4F1 713 aa12.56□□□□□ -0.4
PTCH2-201ENST00000372192 CROCCP2Q86T23 111 aa12.56□□□□□ -0.4
PTCH2-201ENST00000372192 ARMCX3Q9UH62 379 aaPredicted RBP12.56□□□□□ -0.4
PTCH2-201ENST00000372192 PCDHA12Q9UN75 941 aa12.56□□□□□ -0.4
PTCH2-201ENST00000372192 KDM3AQ9Y4C1 1321 aa12.56□□□□□ -0.4
PTCH2-201ENST00000372192 A0A087X0B3 334 aa12.56□□□□□ -0.4
PTCH2-201ENST00000372192 TCRBV5S4A2TA0A5A2 114 aa12.56□□□□□ -0.4
PTCH2-201ENST00000372192 ORC4O43929 436 aa12.56□□□□□ -0.4
PTCH2-201ENST00000372192 ADAMTS2O95450 1211 aa12.56□□□□□ -0.4
PTCH2-201ENST00000372192 H2AFZP0C0S5 128 aa12.56□□□□□ -0.4
PTCH2-201ENST00000372192 HOXA7P31268 230 aaPredicted RBP12.56□□□□□ -0.4
PTCH2-201ENST00000372192 NT5C2P49902 561 aa12.56□□□□□ -0.4
PTCH2-201ENST00000372192 MECOMQ03112 1051 aa12.56□□□□□ -0.4
PTCH2-201ENST00000372192 ADAM9Q13443 819 aa12.56□□□□□ -0.4
PTCH2-201ENST00000372192 PTPROQ16827 1216 aa12.56□□□□□ -0.4
PTCH2-201ENST00000372192 UNC13DQ70J99 1090 aa12.56□□□□□ -0.4
PTCH2-201ENST00000372192 H2AFVQ71UI9 128 aa12.56□□□□□ -0.4
PTCH2-201ENST00000372192 MMGT1Q8N4V1 131 aa12.56□□□□□ -0.4
PTCH2-201ENST00000372192 TRIM9Q9C026 710 aa12.56□□□□□ -0.4
PTCH2-201ENST00000372192 AMFRQ9UKV5 643 aa12.56□□□□□ -0.4
PTCH2-201ENST00000372192 NCK2O43639 380 aa12.56□□□□□ -0.4
PTCH2-201ENST00000372192 USP17L8P0C7I0 530 aa12.56□□□□□ -0.4
PTCH2-201ENST00000372192 CYP19A1P11511 503 aaPredicted RBP12.56□□□□□ -0.4
PTCH2-201ENST00000372192 NEFHP12036 1026 aa12.56□□□□□ -0.4
PTCH2-201ENST00000372192 SH3RF1Q7Z6J0 888 aa12.56□□□□□ -0.4
PTCH2-201ENST00000372192 RSRC1Q96IZ7 334 aaKnown RBP12.56□□□□□ -0.4
PTCH2-201ENST00000372192 DCP1AQ9NPI6 582 aaPredicted RBP12.56□□□□□ -0.4
PTCH2-201ENST00000372192 XRCC5P13010 732 aaKnown RBP12.55□□□□□ -0.4
PTCH2-201ENST00000372192 PSMD2Q13200 908 aa12.55□□□□□ -0.4
PTCH2-201ENST00000372192 SH2D4AQ9H788 454 aa12.55□□□□□ -0.4
PTCH2-201ENST00000372192 ADAMTS1Q9UHI8 967 aa12.55□□□□□ -0.4
PTCH2-201ENST00000372192 BZW2Q9Y6E2 419 aaKnown RBP12.55□□□□□ -0.4
PTCH2-201ENST00000372192 ARHGAP23Q9P227 1491 aa12.55□□□□□ -0.4
PTCH2-201ENST00000372192 PALMO75781 387 aa12.55□□□□□ -0.4
PTCH2-201ENST00000372192 FAM13AO94988 1023 aa12.55□□□□□ -0.4
PTCH2-201ENST00000372192 RBM5P52756 815 aaKnown RBP eCLIP12.55□□□□□ -0.4
PTCH2-201ENST00000372192 GFPT1Q06210 699 aaPredicted RBP12.55□□□□□ -0.4
PTCH2-201ENST00000372192 GPBP1Q86WP2 473 aa12.55□□□□□ -0.4
PTCH2-201ENST00000372192 LACRTQ9GZZ8 138 aa12.55□□□□□ -0.4
PTCH2-201ENST00000372192 PLCB1Q9NQ66 1216 aa12.55□□□□□ -0.4
PTCH2-201ENST00000372192 CNTNAP5Q8WYK1 1306 aa12.55□□□□□ -0.4
PTCH2-201ENST00000372192 UBR1Q8IWV7 1749 aa12.55□□□□□ -0.4
PTCH2-201ENST00000372192 PVALEFA0A1B0GWK0 134 aa12.55□□□□□ -0.4
PTCH2-201ENST00000372192 ESYT3A0FGR9 886 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms