RNA–Protein interactions for RNA: ENST00000371419.6

PFDN4-201, Transcript of prefoldin subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN4, Length 1,462 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-201ENST00000371419 B4DLN1 442 aa18.29■□□□□ 0.52
PFDN4-201ENST00000371419 MEIS2O14770 477 aa18.29■□□□□ 0.52
PFDN4-201ENST00000371419 SNAI1O95863 264 aaPredicted RBP18.29■□□□□ 0.52
PFDN4-201ENST00000371419 MYCP01106 439 aaPredicted RBP18.29■□□□□ 0.52
PFDN4-201ENST00000371419 CCL5P13501 91 aa18.29■□□□□ 0.52
PFDN4-201ENST00000371419 ADCY7P51828 1080 aa18.29■□□□□ 0.52
PFDN4-201ENST00000371419 MTFR1Q15390 333 aa18.29■□□□□ 0.52
PFDN4-201ENST00000371419 FCHSD1Q86WN1 690 aa18.29■□□□□ 0.52
PFDN4-201ENST00000371419 CCDC148Q8NFR7 591 aa18.29■□□□□ 0.52
PFDN4-201ENST00000371419 MORC4Q8TE76 937 aa18.29■□□□□ 0.52
PFDN4-201ENST00000371419 WASF1Q92558 559 aa18.29■□□□□ 0.52
PFDN4-201ENST00000371419 HMX1Q9NP08 348 aaPredicted RBP18.29■□□□□ 0.52
PFDN4-201ENST00000371419 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.29■□□□□ 0.52
PFDN4-201ENST00000371419 VPS54Q9P1Q0 977 aa18.29■□□□□ 0.52
PFDN4-201ENST00000371419 CNPY2Q9Y2B0 182 aa18.29■□□□□ 0.52
PFDN4-201ENST00000371419 JAK2O60674 1132 aa18.28■□□□□ 0.52
PFDN4-201ENST00000371419 DTNBO60941 627 aa18.28■□□□□ 0.52
PFDN4-201ENST00000371419 PRAMEF19Q5SWL8 479 aa18.28■□□□□ 0.52
PFDN4-201ENST00000371419 ARHGEF16Q5VV41 709 aa18.28■□□□□ 0.52
PFDN4-201ENST00000371419 ZMYND12Q9H0C1 365 aa18.28■□□□□ 0.52
PFDN4-201ENST00000371419 UNC93B1Q9H1C4 597 aa18.28■□□□□ 0.52
PFDN4-201ENST00000371419 C6orf50Q9HD87 102 aa18.28■□□□□ 0.52
PFDN4-201ENST00000371419 CYBAP13498 195 aa18.27■□□□□ 0.52
PFDN4-201ENST00000371419 EDNRBP24530 442 aa18.27■□□□□ 0.52
PFDN4-201ENST00000371419 UBE2SQ16763 222 aa18.27■□□□□ 0.52
PFDN4-201ENST00000371419 FAM177A1Q8N128 213 aaPredicted RBP18.27■□□□□ 0.52
PFDN4-201ENST00000371419 TRPV1Q8NER1 839 aa18.27■□□□□ 0.52
PFDN4-201ENST00000371419 AIFM3Q96NN9 605 aa18.27■□□□□ 0.52
PFDN4-201ENST00000371419 IWS1Q96ST2 819 aa18.27■□□□□ 0.52
PFDN4-201ENST00000371419 RNF208Q9H0X6 261 aa18.27■□□□□ 0.52
PFDN4-201ENST00000371419 ABHD16BQ9H3Z7 469 aa18.27■□□□□ 0.52
PFDN4-201ENST00000371419 PXMP2Q9NR77 195 aa18.27■□□□□ 0.52
PFDN4-201ENST00000371419 FDPSP14324 419 aaKnown RBP18.26■□□□□ 0.51
PFDN4-201ENST00000371419 XBP1P17861 261 aa18.26■□□□□ 0.51
PFDN4-201ENST00000371419 EIF2AK2P19525 551 aaKnown RBP18.26■□□□□ 0.51
PFDN4-201ENST00000371419 GNA11P29992 359 aa18.26■□□□□ 0.51
PFDN4-201ENST00000371419 CCND3P30281 292 aaPredicted RBP18.26■□□□□ 0.51
PFDN4-201ENST00000371419 PDE4DQ08499 809 aa18.26■□□□□ 0.51
PFDN4-201ENST00000371419 ACVR2BQ13705 512 aa18.26■□□□□ 0.51
PFDN4-201ENST00000371419 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.26■□□□□ 0.51
PFDN4-201ENST00000371419 DDX49Q9Y6V7 483 aaKnown RBP18.26■□□□□ 0.51
PFDN4-201ENST00000371419 MCM3APO60318 1980 aa18.26■□□□□ 0.51
PFDN4-201ENST00000371419 SPDYE3A6NKU9 549 aa18.26■□□□□ 0.51
PFDN4-201ENST00000371419 ZNF865P0CJ78 1059 aaPredicted RBP18.26■□□□□ 0.51
PFDN4-201ENST00000371419 CNGA1P29973 690 aa18.26■□□□□ 0.51
PFDN4-201ENST00000371419 NLRP5P59047 1200 aa18.26■□□□□ 0.51
PFDN4-201ENST00000371419 BICD2Q8TD16 824 aa18.26■□□□□ 0.51
PFDN4-201ENST00000371419 SHISA4Q96DD7 197 aa18.26■□□□□ 0.51
PFDN4-201ENST00000371419 PDCD2LQ9BRP1 358 aa18.26■□□□□ 0.51
PFDN4-201ENST00000371419 ALG1Q9BT22 464 aa18.26■□□□□ 0.51
PFDN4-201ENST00000371419 TMEM106CQ9BVX2 250 aa18.26■□□□□ 0.51
PFDN4-201ENST00000371419 PAK6Q9NQU5 681 aaPredicted RBP18.26■□□□□ 0.51
PFDN4-201ENST00000371419 ZHX1Q9UKY1 873 aaPredicted RBP18.26■□□□□ 0.51
PFDN4-201ENST00000371419 CCDC85CA6NKD9 419 aa18.25■□□□□ 0.51
PFDN4-201ENST00000371419 FOSP01100 380 aaPredicted RBP18.25■□□□□ 0.51
PFDN4-201ENST00000371419 NR3C2P08235 984 aa18.25■□□□□ 0.51
PFDN4-201ENST00000371419 HMGN5P82970 282 aaKnown RBP18.25■□□□□ 0.51
PFDN4-201ENST00000371419 STXBP2Q15833 593 aa18.25■□□□□ 0.51
PFDN4-201ENST00000371419 KATNBL1Q9H079 304 aa18.25■□□□□ 0.51
PFDN4-201ENST00000371419 VTA1Q9NP79 307 aa18.25■□□□□ 0.51
PFDN4-201ENST00000371419 FRMPD4Q14CM0 1322 aa18.24■□□□□ 0.51
PFDN4-201ENST00000371419 SEPT4O43236 478 aa18.24■□□□□ 0.51
PFDN4-201ENST00000371419 GJB1P08034 283 aa18.24■□□□□ 0.51
PFDN4-201ENST00000371419 CLK2P49760 499 aaKnown RBP18.24■□□□□ 0.51
PFDN4-201ENST00000371419 AP3B2Q13367 1082 aa18.24■□□□□ 0.51
PFDN4-201ENST00000371419 PGM5Q15124 567 aa18.24■□□□□ 0.51
PFDN4-201ENST00000371419 MCTP2Q6DN12 878 aa18.24■□□□□ 0.51
PFDN4-201ENST00000371419 GALNT17Q6IS24 598 aa18.24■□□□□ 0.51
PFDN4-201ENST00000371419 EEPD1Q7L9B9 569 aa18.24■□□□□ 0.51
PFDN4-201ENST00000371419 REXO1Q8N1G1 1221 aaKnown RBP18.24■□□□□ 0.51
PFDN4-201ENST00000371419 EHMT1Q9H9B1 1298 aa18.24■□□□□ 0.51
PFDN4-201ENST00000371419 PCDHA6Q9UN73 950 aa18.24■□□□□ 0.51
PFDN4-201ENST00000371419 PCDHA8Q9Y5H6 950 aa18.24■□□□□ 0.51
PFDN4-201ENST00000371419 KIAA0100Q14667 2235 aaKnown RBP18.23■□□□□ 0.51
PFDN4-201ENST00000371419 K7ELQ4 463 aaPredicted RBP18.23■□□□□ 0.51
PFDN4-201ENST00000371419 MSCO60682 206 aa18.23■□□□□ 0.51
PFDN4-201ENST00000371419 VSIG10LQ86VR7 867 aa18.23■□□□□ 0.51
PFDN4-201ENST00000371419 FBXO16Q8IX29 292 aaPredicted RBP18.23■□□□□ 0.51
PFDN4-201ENST00000371419 DEFB118Q96PH6 123 aa18.23■□□□□ 0.51
PFDN4-201ENST00000371419 DDX20Q9UHI6 824 aaKnown RBP18.23■□□□□ 0.51
PFDN4-201ENST00000371419 FAM184BQ9ULE4 1060 aa18.23■□□□□ 0.51
PFDN4-201ENST00000371419 PCDHA4Q9UN74 947 aa18.23■□□□□ 0.51
PFDN4-201ENST00000371419 EIF3JO75822 258 aaKnown RBP18.22■□□□□ 0.51
PFDN4-201ENST00000371419 MYCLP12524 364 aaPredicted RBP18.22■□□□□ 0.51
PFDN4-201ENST00000371419 AKR1A1P14550 325 aa18.22■□□□□ 0.51
PFDN4-201ENST00000371419 CCND2P30279 289 aa18.22■□□□□ 0.51
PFDN4-201ENST00000371419 CCDC144BQ3MJ40 725 aa18.22■□□□□ 0.51
PFDN4-201ENST00000371419 JAKMIP3Q5VZ66 844 aa18.22■□□□□ 0.51
PFDN4-201ENST00000371419 TAPT1Q6NXT6 567 aa18.22■□□□□ 0.51
PFDN4-201ENST00000371419 FAM184AQ8NB25 1140 aa18.22■□□□□ 0.51
PFDN4-201ENST00000371419 IL31RAQ8NI17 732 aa18.22■□□□□ 0.51
PFDN4-201ENST00000371419 PHF20Q9BVI0 1012 aa18.22■□□□□ 0.51
PFDN4-201ENST00000371419 TMEM260Q9NX78 707 aa18.22■□□□□ 0.51
PFDN4-201ENST00000371419 KCNJ14Q9UNX9 436 aa18.22■□□□□ 0.51
PFDN4-201ENST00000371419 BRCA2P51587 3418 aa18.22■□□□□ 0.51
PFDN4-201ENST00000371419 ADAMTS3O15072 1205 aa18.21■□□□□ 0.51
PFDN4-201ENST00000371419 TRIM29Q14134 588 aa18.21■□□□□ 0.51
PFDN4-201ENST00000371419 XRRA1Q6P2D8 792 aa18.21■□□□□ 0.51
PFDN4-201ENST00000371419 BLIDQ8IZY5 108 aa18.21■□□□□ 0.51
PFDN4-201ENST00000371419 DAGLBQ8NCG7 672 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms