RNA–Protein interactions for RNA: ENST00000370656.5

RPF1-202, Transcript of ribosome production factor 1 homolog, humanhuman

TSL 2 BASIC

Gene RPF1, Length 724 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPF1-202ENST00000370656 ALDH5A1P51649 535 aaPredicted RBP17.72■□□□□ 0.43
RPF1-202ENST00000370656 BAATQ14032 418 aaPredicted RBP17.72■□□□□ 0.43
RPF1-202ENST00000370656 CCDC96Q2M329 555 aa17.72■□□□□ 0.43
RPF1-202ENST00000370656 FAM47CQ5HY64 1035 aa17.72■□□□□ 0.43
RPF1-202ENST00000370656 OR6J1Q8NGC5 347 aa17.72■□□□□ 0.43
RPF1-202ENST00000370656 DCAF4Q8WV16 495 aa17.72■□□□□ 0.43
RPF1-202ENST00000370656 FSD1Q9BTV5 496 aa17.72■□□□□ 0.43
RPF1-202ENST00000370656 PNMA2Q9UL42 364 aa17.72■□□□□ 0.43
RPF1-202ENST00000370656 MTMR7Q9Y216 660 aa17.72■□□□□ 0.43
RPF1-202ENST00000370656 HCN4Q9Y3Q4 1203 aa17.72■□□□□ 0.43
RPF1-202ENST00000370656 MTCH2Q9Y6C9 303 aa17.72■□□□□ 0.43
RPF1-202ENST00000370656 PTPDC1A2A3K4 754 aa17.71■□□□□ 0.43
RPF1-202ENST00000370656 PITPNM1O00562 1244 aa17.71■□□□□ 0.43
RPF1-202ENST00000370656 NKRFO15226 690 aaKnown RBP eCLIP17.71■□□□□ 0.43
RPF1-202ENST00000370656 SDSP20132 328 aa17.71■□□□□ 0.43
RPF1-202ENST00000370656 KCNQ1P51787 676 aa17.71■□□□□ 0.43
RPF1-202ENST00000370656 TMEM63BQ5T3F8 832 aa17.71■□□□□ 0.43
RPF1-202ENST00000370656 VWCEQ96DN2 955 aa17.71■□□□□ 0.43
RPF1-202ENST00000370656 SEC62Q99442 399 aaKnown RBP17.71■□□□□ 0.43
RPF1-202ENST00000370656 FTOQ9C0B1 505 aaKnown RBP eCLIP17.71■□□□□ 0.43
RPF1-202ENST00000370656 RANBP17Q9H2T7 1088 aaKnown RBP17.71■□□□□ 0.43
RPF1-202ENST00000370656 RBM47A0AV96 593 aaKnown RBP17.7■□□□□ 0.42
RPF1-202ENST00000370656 B4DLN1 442 aa17.7■□□□□ 0.42
RPF1-202ENST00000370656 RANBP6O60518 1105 aaKnown RBP17.7■□□□□ 0.42
RPF1-202ENST00000370656 EIF5BO60841 1220 aaKnown RBP17.7■□□□□ 0.42
RPF1-202ENST00000370656 MRPL12P52815 198 aaKnown RBP17.7■□□□□ 0.42
RPF1-202ENST00000370656 PTPN11Q06124 597 aaPredicted RBP17.7■□□□□ 0.42
RPF1-202ENST00000370656 BFSP2Q13515 415 aa17.7■□□□□ 0.42
RPF1-202ENST00000370656 PPP2R5BQ15173 497 aa17.7■□□□□ 0.42
RPF1-202ENST00000370656 NFRKBQ6P4R8 1299 aa17.7■□□□□ 0.42
RPF1-202ENST00000370656 PURBQ96QR8 312 aaKnown RBP17.7■□□□□ 0.42
RPF1-202ENST00000370656 CERS4Q9HA82 394 aa17.7■□□□□ 0.42
RPF1-202ENST00000370656 IL17RBQ9NRM6 502 aa17.7■□□□□ 0.42
RPF1-202ENST00000370656 NOD1Q9Y239 953 aa17.7■□□□□ 0.42
RPF1-202ENST00000370656 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.7■□□□□ 0.42
RPF1-202ENST00000370656 TRIP12Q14669 1992 aaPredicted RBP17.7■□□□□ 0.42
RPF1-202ENST00000370656 RFXAPO00287 272 aa17.69■□□□□ 0.42
RPF1-202ENST00000370656 NMT2O60551 498 aa17.69■□□□□ 0.42
RPF1-202ENST00000370656 CDC45O75419 566 aa17.69■□□□□ 0.42
RPF1-202ENST00000370656 PDE4DQ08499 809 aa17.69■□□□□ 0.42
RPF1-202ENST00000370656 NBPF20Q3BBV1 942 aa17.69■□□□□ 0.42
RPF1-202ENST00000370656 ZMYM1Q5SVZ6 1142 aa17.69■□□□□ 0.42
RPF1-202ENST00000370656 SCFD2Q8WU76 684 aa17.69■□□□□ 0.42
RPF1-202ENST00000370656 ARNTL2Q8WYA1 636 aa17.69■□□□□ 0.42
RPF1-202ENST00000370656 BAIAP3O94812 1187 aa17.68■□□□□ 0.42
RPF1-202ENST00000370656 SEC24BO95487 1268 aa17.68■□□□□ 0.42
RPF1-202ENST00000370656 IQCF3P0C7M6 154 aa17.68■□□□□ 0.42
RPF1-202ENST00000370656 CALML3P27482 149 aa17.68■□□□□ 0.42
RPF1-202ENST00000370656 KCNJ6P48051 423 aa17.68■□□□□ 0.42
RPF1-202ENST00000370656 TAP1Q03518 808 aa17.68■□□□□ 0.42
RPF1-202ENST00000370656 CTDSPL2Q05D32 466 aa17.68■□□□□ 0.42
RPF1-202ENST00000370656 SYDE2Q5VT97 1194 aa17.68■□□□□ 0.42
RPF1-202ENST00000370656 BTNL9Q6UXG8 535 aa17.68■□□□□ 0.42
RPF1-202ENST00000370656 RNF207Q6ZRF8 634 aa17.68■□□□□ 0.42
RPF1-202ENST00000370656 HERC6Q8IVU3 1022 aa17.68■□□□□ 0.42
RPF1-202ENST00000370656 CCDC155Q8N6L0 562 aa17.68■□□□□ 0.42
RPF1-202ENST00000370656 HLA-CQ95604 372 aa17.68■□□□□ 0.42
RPF1-202ENST00000370656 ARIH1Q9Y4X5 557 aaPredicted RBP17.68■□□□□ 0.42
RPF1-202ENST00000370656 NFIBO00712 420 aa17.67■□□□□ 0.42
RPF1-202ENST00000370656 SLC16A2P36021 539 aa17.67■□□□□ 0.42
RPF1-202ENST00000370656 TICAM2Q86XR7 235 aa17.67■□□□□ 0.42
RPF1-202ENST00000370656 LRFN3Q9BTN0 628 aa17.67■□□□□ 0.42
RPF1-202ENST00000370656 TET1Q8NFU7 2136 aa17.66■□□□□ 0.42
RPF1-202ENST00000370656 A6NJR5 290 aa17.66■□□□□ 0.42
RPF1-202ENST00000370656 TLL1O43897 1013 aa17.66■□□□□ 0.42
RPF1-202ENST00000370656 TOP1P11387 765 aaKnown RBP17.66■□□□□ 0.42
RPF1-202ENST00000370656 NOVP48745 357 aa17.66■□□□□ 0.42
RPF1-202ENST00000370656 TTBK2Q6IQ55 1244 aa17.66■□□□□ 0.42
RPF1-202ENST00000370656 RASGRP2Q7LDG7 609 aa17.66■□□□□ 0.42
RPF1-202ENST00000370656 DNERQ8NFT8 737 aa17.66■□□□□ 0.42
RPF1-202ENST00000370656 EPHX3Q9H6B9 360 aa17.66■□□□□ 0.42
RPF1-202ENST00000370656 TOMM22Q9NS69 142 aa17.66■□□□□ 0.42
RPF1-202ENST00000370656 ANAPC4Q9UJX5 808 aa17.66■□□□□ 0.42
RPF1-202ENST00000370656 EPOPA6NHQ4 379 aa17.65■□□□□ 0.42
RPF1-202ENST00000370656 ORC4O43929 436 aa17.65■□□□□ 0.42
RPF1-202ENST00000370656 TXNP10599 105 aaKnown RBP17.65■□□□□ 0.42
RPF1-202ENST00000370656 SLC30A10Q6XR72 485 aa17.65■□□□□ 0.42
RPF1-202ENST00000370656 CAGE1Q8TC20 777 aa17.65■□□□□ 0.42
RPF1-202ENST00000370656 GPCPD1Q9NPB8 672 aa17.65■□□□□ 0.42
RPF1-202ENST00000370656 INCENPQ9NQS7 918 aa17.65■□□□□ 0.42
RPF1-202ENST00000370656 PARNO95453 639 aaKnown RBP17.64■□□□□ 0.41
RPF1-202ENST00000370656 CHMP4BP1P59074 171 aa17.64■□□□□ 0.41
RPF1-202ENST00000370656 RPS6P62753 249 aaKnown RBP17.64■□□□□ 0.41
RPF1-202ENST00000370656 PTGISQ16647 500 aa17.64■□□□□ 0.41
RPF1-202ENST00000370656 TMEM31Q5JXX7 168 aa17.64■□□□□ 0.41
RPF1-202ENST00000370656 KRT40Q6A162 431 aa17.64■□□□□ 0.41
RPF1-202ENST00000370656 AFAP1L1Q8TED9 768 aa17.64■□□□□ 0.41
RPF1-202ENST00000370656 ZBED2Q9BTP6 218 aa17.64■□□□□ 0.41
RPF1-202ENST00000370656 FRMPD2Q68DX3 1309 aaPredicted RBP17.64■□□□□ 0.41
RPF1-202ENST00000370656 COL4A4P53420 1690 aaPredicted RBP17.64■□□□□ 0.41
RPF1-202ENST00000370656 PTPRSQ13332 1948 aa17.63■□□□□ 0.41
RPF1-202ENST00000370656 HAX1O00165 279 aa17.63■□□□□ 0.41
RPF1-202ENST00000370656 EDNRBP24530 442 aa17.63■□□□□ 0.41
RPF1-202ENST00000370656 FXR2P51116 673 aaKnown RBP eCLIP17.63■□□□□ 0.41
RPF1-202ENST00000370656 GRB10Q13322 594 aa17.63■□□□□ 0.41
RPF1-202ENST00000370656 RRP12Q5JTH9 1297 aaKnown RBP17.63■□□□□ 0.41
RPF1-202ENST00000370656 CLEC4DQ8WXI8 215 aa17.63■□□□□ 0.41
RPF1-202ENST00000370656 TMEM47Q9BQJ4 181 aa17.63■□□□□ 0.41
RPF1-202ENST00000370656 LMCD1Q9NZU5 365 aa17.63■□□□□ 0.41
RPF1-202ENST00000370656 WDR19Q8NEZ3 1342 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms