RNA–Protein interactions for RNA: ENST00000370651.5

PTP4A1-201, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A1, Length 5,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-201ENST00000370651 CDK12Q9NYV4 1490 aaPredicted RBP18.69■□□□□ 0.58
PTP4A1-201ENST00000370651 TMEM2Q9UHN6 1383 aa18.69■□□□□ 0.58
PTP4A1-201ENST00000370651 MAN1A1P33908 653 aa18.69■□□□□ 0.58
PTP4A1-201ENST00000370651 TCP10Q12799 353 aa18.69■□□□□ 0.58
PTP4A1-201ENST00000370651 PRAMEF22A3QJZ6 481 aa18.69■□□□□ 0.58
PTP4A1-201ENST00000370651 AFPP02771 609 aaKnown RBP18.69■□□□□ 0.58
PTP4A1-201ENST00000370651 PDCLQ13371 301 aa18.69■□□□□ 0.58
PTP4A1-201ENST00000370651 FAM133AQ8N9E0 248 aa18.69■□□□□ 0.58
PTP4A1-201ENST00000370651 ATG3Q9NT62 314 aa18.69■□□□□ 0.58
PTP4A1-201ENST00000370651 GJB4Q9NTQ9 266 aa18.69■□□□□ 0.58
PTP4A1-201ENST00000370651 STK17AQ9UEE5 414 aa18.69■□□□□ 0.58
PTP4A1-201ENST00000370651 TPX2Q9ULW0 747 aaKnown RBP18.69■□□□□ 0.58
PTP4A1-201ENST00000370651 NFU1Q9UMS0 254 aa18.69■□□□□ 0.58
PTP4A1-201ENST00000370651 PTPREP23469 700 aa18.68■□□□□ 0.58
PTP4A1-201ENST00000370651 GBP7Q8N8V2 638 aaPredicted RBP18.68■□□□□ 0.58
PTP4A1-201ENST00000370651 KCNG1Q9UIX4 513 aa18.68■□□□□ 0.58
PTP4A1-201ENST00000370651 POC1B-GALNT4F8VUJ3 575 aa18.68■□□□□ 0.58
PTP4A1-201ENST00000370651 PRPF3O43395 683 aaKnown RBP18.68■□□□□ 0.58
PTP4A1-201ENST00000370651 RFC1P35251 1148 aaPredicted RBP18.68■□□□□ 0.58
PTP4A1-201ENST00000370651 FAM133BQ5BKY9 247 aaKnown RBP18.68■□□□□ 0.58
PTP4A1-201ENST00000370651 CDAN1Q8IWY9 1227 aa18.68■□□□□ 0.58
PTP4A1-201ENST00000370651 PARP3Q9Y6F1 533 aa18.68■□□□□ 0.58
PTP4A1-201ENST00000370651 USH1CQ9Y6N9 552 aa18.68■□□□□ 0.58
PTP4A1-201ENST00000370651 SOS2Q07890 1332 aaPredicted RBP18.68■□□□□ 0.58
PTP4A1-201ENST00000370651 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.68■□□□□ 0.58
PTP4A1-201ENST00000370651 NEK9Q8TD19 979 aa18.68■□□□□ 0.58
PTP4A1-201ENST00000370651 NDST4Q9H3R1 872 aa18.68■□□□□ 0.58
PTP4A1-201ENST00000370651 SMIM24O75264 130 aa18.68■□□□□ 0.58
PTP4A1-201ENST00000370651 SERPING1P05155 500 aa18.68■□□□□ 0.58
PTP4A1-201ENST00000370651 BFSP1Q12934 665 aa18.68■□□□□ 0.58
PTP4A1-201ENST00000370651 MFSD14BQ5SR56 506 aa18.68■□□□□ 0.58
PTP4A1-201ENST00000370651 NSMFQ6X4W1 530 aa18.68■□□□□ 0.58
PTP4A1-201ENST00000370651 KRT19P08727 400 aa18.67■□□□□ 0.58
PTP4A1-201ENST00000370651 CYP4A11Q02928 519 aa18.67■□□□□ 0.58
PTP4A1-201ENST00000370651 SH2D4BQ5SQS7 431 aa18.67■□□□□ 0.58
PTP4A1-201ENST00000370651 ANKRD35Q8N283 1001 aa18.67■□□□□ 0.58
PTP4A1-201ENST00000370651 TRIM4Q9C037 500 aa18.67■□□□□ 0.58
PTP4A1-201ENST00000370651 MAP3K15Q6ZN16 1313 aa18.67■□□□□ 0.58
PTP4A1-201ENST00000370651 EIF3BP55884 814 aaKnown RBP18.67■□□□□ 0.58
PTP4A1-201ENST00000370651 RBBP5Q15291 538 aaKnown RBP18.67■□□□□ 0.58
PTP4A1-201ENST00000370651 HADHQ16836 314 aaKnown RBP18.67■□□□□ 0.58
PTP4A1-201ENST00000370651 ARHGEF18Q6ZSZ5 1173 aa18.67■□□□□ 0.58
PTP4A1-201ENST00000370651 ABHD10Q9NUJ1 306 aa18.67■□□□□ 0.58
PTP4A1-201ENST00000370651 N4BP2L2Q92802 583 aaPredicted RBP18.67■□□□□ 0.58
PTP4A1-201ENST00000370651 CCDC127Q96BQ5 260 aa18.67■□□□□ 0.58
PTP4A1-201ENST00000370651 HSPA6P17066 643 aa18.67■□□□□ 0.58
PTP4A1-201ENST00000370651 MYL7Q01449 175 aa18.67■□□□□ 0.58
PTP4A1-201ENST00000370651 C10orf76Q5T2E6 689 aa18.67■□□□□ 0.58
PTP4A1-201ENST00000370651 BSPRYQ5W0U4 402 aa18.67■□□□□ 0.58
PTP4A1-201ENST00000370651 ARMCX5Q6P1M9 558 aa18.67■□□□□ 0.58
PTP4A1-201ENST00000370651 MYO1FO00160 1098 aa18.66■□□□□ 0.58
PTP4A1-201ENST00000370651 PRKAB2O43741 272 aa18.66■□□□□ 0.58
PTP4A1-201ENST00000370651 RNASELQ05823 741 aaKnown RBP18.66■□□□□ 0.58
PTP4A1-201ENST00000370651 DPP8Q6V1X1 898 aaPredicted RBP18.66■□□□□ 0.58
PTP4A1-201ENST00000370651 FMO2Q99518 471 aa18.66■□□□□ 0.58
PTP4A1-201ENST00000370651 EPC1Q9H2F5 836 aa18.66■□□□□ 0.58
PTP4A1-201ENST00000370651 Q9H521 79 aa18.66■□□□□ 0.58
PTP4A1-201ENST00000370651 NSFP46459 744 aaKnown RBP18.66■□□□□ 0.58
PTP4A1-201ENST00000370651 DHX40Q8IX18 779 aaKnown RBP18.66■□□□□ 0.58
PTP4A1-201ENST00000370651 KCNF1Q9H3M0 494 aa18.66■□□□□ 0.58
PTP4A1-201ENST00000370651 CCNL1Q9UK58 526 aaPredicted RBP18.66■□□□□ 0.58
PTP4A1-201ENST00000370651 RABGAP1Q9Y3P9 1069 aa18.66■□□□□ 0.58
PTP4A1-201ENST00000370651 SLCO1A2P46721 670 aa18.66■□□□□ 0.58
PTP4A1-201ENST00000370651 CUL1Q13616 776 aa18.66■□□□□ 0.58
PTP4A1-201ENST00000370651 RNF34Q969K3 372 aa18.66■□□□□ 0.58
PTP4A1-201ENST00000370651 USP40Q9NVE5 1235 aa18.66■□□□□ 0.58
PTP4A1-201ENST00000370651 GIPC1O14908 333 aa18.66■□□□□ 0.58
PTP4A1-201ENST00000370651 YWHAEP62258 255 aaKnown RBP18.66■□□□□ 0.58
PTP4A1-201ENST00000370651 LMNB2Q03252 620 aa18.66■□□□□ 0.58
PTP4A1-201ENST00000370651 GLE1Q53GS7 698 aaKnown RBP18.66■□□□□ 0.58
PTP4A1-201ENST00000370651 SCYL3Q8IZE3 742 aa18.66■□□□□ 0.58
PTP4A1-201ENST00000370651 ANO9A1A5B4 782 aa18.65■□□□□ 0.58
PTP4A1-201ENST00000370651 PABPC4Q13310 644 aaKnown RBP eCLIP18.65■□□□□ 0.583e-9■□□□□ 10.3
PTP4A1-201ENST00000370651 FAM102BQ5T8I3 360 aa18.65■□□□□ 0.58
PTP4A1-201ENST00000370651 ECEL1O95672 775 aa18.65■□□□□ 0.58
PTP4A1-201ENST00000370651 ADCY1Q08828 1119 aa18.65■□□□□ 0.58
PTP4A1-201ENST00000370651 SLMAPQ14BN4 828 aa18.65■□□□□ 0.58
PTP4A1-201ENST00000370651 ARL6IP4Q66PJ3 421 aaKnown RBP18.65■□□□□ 0.58
PTP4A1-201ENST00000370651 OTUD6AQ7L8S5 288 aa18.65■□□□□ 0.58
PTP4A1-201ENST00000370651 SRGAP2O75044 1071 aa18.65■□□□□ 0.58
PTP4A1-201ENST00000370651 GGCXP38435 758 aa18.65■□□□□ 0.58
PTP4A1-201ENST00000370651 MRPS25P82663 173 aaKnown RBP18.65■□□□□ 0.58
PTP4A1-201ENST00000370651 LCORLQ8N3X6 602 aa18.65■□□□□ 0.58
PTP4A1-201ENST00000370651 GSDMBQ8TAX9 411 aa18.65■□□□□ 0.58
PTP4A1-201ENST00000370651 PFDN4Q9NQP4 134 aa18.65■□□□□ 0.58
PTP4A1-201ENST00000370651 ST7Q9NRC1 585 aa18.65■□□□□ 0.58
PTP4A1-201ENST00000370651 ADGRG1Q9Y653 693 aa18.65■□□□□ 0.58
PTP4A1-201ENST00000370651 PBRM1Q86U86 1689 aa18.65■□□□□ 0.58
PTP4A1-201ENST00000370651 BCORL1Q5H9F3 1711 aa18.65■□□□□ 0.58
PTP4A1-201ENST00000370651 RASGRF2O14827 1237 aa18.65■□□□□ 0.58
PTP4A1-201ENST00000370651 PLCG1P19174 1290 aa18.65■□□□□ 0.58
PTP4A1-201ENST00000370651 AOC3Q16853 763 aa18.65■□□□□ 0.58
PTP4A1-201ENST00000370651 ODR4Q5SWX8 454 aa18.65■□□□□ 0.58
PTP4A1-201ENST00000370651 TBCKQ8TEA7 893 aa18.65■□□□□ 0.58
PTP4A1-201ENST00000370651 ZNF526Q8TF50 670 aaPredicted RBP18.65■□□□□ 0.58
PTP4A1-201ENST00000370651 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.65■□□□□ 0.581e-7■■■■■ 29.6
PTP4A1-201ENST00000370651 UGGT1Q9NYU2 1555 aa18.65■□□□□ 0.58
PTP4A1-201ENST00000370651 PSMC2P35998 433 aaKnown RBP18.64■□□□□ 0.58
PTP4A1-201ENST00000370651 FAM186BQ8IYM0 893 aa18.64■□□□□ 0.58
PTP4A1-201ENST00000370651 VTI1AQ96AJ9 217 aa18.64■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms