RNA–Protein interactions for RNA: ENST00000370496.3

COL9A1-204, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 1,372 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-204ENST00000370496 MSCO60682 206 aa17.06■□□□□ 0.32
COL9A1-204ENST00000370496 DEXIO95424 95 aa17.06■□□□□ 0.32
COL9A1-204ENST00000370496 SNAI1O95863 264 aaPredicted RBP17.06■□□□□ 0.32
COL9A1-204ENST00000370496 EIF2AK2P19525 551 aaKnown RBP17.06■□□□□ 0.32
COL9A1-204ENST00000370496 ADCY7P51828 1080 aa17.06■□□□□ 0.32
COL9A1-204ENST00000370496 ACVR2BQ13705 512 aa17.06■□□□□ 0.32
COL9A1-204ENST00000370496 FBXO16Q8IX29 292 aaPredicted RBP17.06■□□□□ 0.32
COL9A1-204ENST00000370496 CCDC148Q8NFR7 591 aa17.06■□□□□ 0.32
COL9A1-204ENST00000370496 TAAR1Q96RJ0 339 aa17.06■□□□□ 0.32
COL9A1-204ENST00000370496 DDX20Q9UHI6 824 aaKnown RBP17.06■□□□□ 0.32
COL9A1-204ENST00000370496 KIAA0100Q14667 2235 aaKnown RBP17.06■□□□□ 0.32
COL9A1-204ENST00000370496 AKR1A1P14550 325 aa17.05■□□□□ 0.32
COL9A1-204ENST00000370496 GJA8P48165 433 aa17.05■□□□□ 0.32
COL9A1-204ENST00000370496 TYW1BQ6NUM6 668 aa17.05■□□□□ 0.32
COL9A1-204ENST00000370496 EEPD1Q7L9B9 569 aa17.05■□□□□ 0.32
COL9A1-204ENST00000370496 VTA1Q9NP79 307 aa17.05■□□□□ 0.32
COL9A1-204ENST00000370496 PXMP2Q9NR77 195 aa17.05■□□□□ 0.32
COL9A1-204ENST00000370496 STK36Q9NRP7 1315 aa17.05■□□□□ 0.32
COL9A1-204ENST00000370496 PIK3CDO00329 1044 aa17.04■□□□□ 0.32
COL9A1-204ENST00000370496 SGPL1O95470 568 aa17.04■□□□□ 0.32
COL9A1-204ENST00000370496 ZNF865P0CJ78 1059 aaPredicted RBP17.04■□□□□ 0.32
COL9A1-204ENST00000370496 PKN1Q16512 942 aa17.04■□□□□ 0.32
COL9A1-204ENST00000370496 UBE2SQ16763 222 aa17.04■□□□□ 0.32
COL9A1-204ENST00000370496 ANO1Q5XXA6 986 aa17.04■□□□□ 0.32
COL9A1-204ENST00000370496 USP17L6PQ6QN14 398 aa17.04■□□□□ 0.32
COL9A1-204ENST00000370496 IL27Q8NEV9 243 aa17.04■□□□□ 0.32
COL9A1-204ENST00000370496 MORC4Q8TE76 937 aa17.04■□□□□ 0.32
COL9A1-204ENST00000370496 KIAA1217Q5T5P2 1943 aa17.04■□□□□ 0.32
COL9A1-204ENST00000370496 SMCO2A6NFE2 343 aa17.03■□□□□ 0.32
COL9A1-204ENST00000370496 SPDYE3A6NKU9 549 aa17.03■□□□□ 0.32
COL9A1-204ENST00000370496 TFRCP02786 760 aaKnown RBP17.03■□□□□ 0.32
COL9A1-204ENST00000370496 RARBP10826 455 aa17.03■□□□□ 0.32
COL9A1-204ENST00000370496 EDNRBP24530 442 aa17.03■□□□□ 0.32
COL9A1-204ENST00000370496 CCDC83Q8IWF9 413 aa17.03■□□□□ 0.32
COL9A1-204ENST00000370496 SHISA4Q96DD7 197 aa17.03■□□□□ 0.32
COL9A1-204ENST00000370496 ZSCAN31Q96LW9 406 aaPredicted RBP17.03■□□□□ 0.32
COL9A1-204ENST00000370496 IWS1Q96ST2 819 aa17.03■□□□□ 0.32
COL9A1-204ENST00000370496 KATNBL1Q9H079 304 aa17.03■□□□□ 0.32
COL9A1-204ENST00000370496 GLT8D2Q9H1C3 349 aa17.03■□□□□ 0.32
COL9A1-204ENST00000370496 RIC8AQ9NPQ8 531 aa17.03■□□□□ 0.32
COL9A1-204ENST00000370496 SH2B1Q9NRF2 756 aaPredicted RBP17.03■□□□□ 0.32
COL9A1-204ENST00000370496 VPS54Q9P1Q0 977 aa17.03■□□□□ 0.32
COL9A1-204ENST00000370496 FAM184BQ9ULE4 1060 aa17.03■□□□□ 0.32
COL9A1-204ENST00000370496 MEIS2O14770 477 aa17.02■□□□□ 0.32
COL9A1-204ENST00000370496 MYCLP12524 364 aaPredicted RBP17.02■□□□□ 0.32
COL9A1-204ENST00000370496 EN2P19622 333 aaPredicted RBP17.02■□□□□ 0.32
COL9A1-204ENST00000370496 CCND2P30279 289 aa17.02■□□□□ 0.32
COL9A1-204ENST00000370496 STXBP2Q15833 593 aa17.02■□□□□ 0.32
COL9A1-204ENST00000370496 CCDC144BQ3MJ40 725 aa17.02■□□□□ 0.32
COL9A1-204ENST00000370496 LENG1Q96BZ8 264 aaPredicted RBP17.02■□□□□ 0.32
COL9A1-204ENST00000370496 PDCD2LQ9BRP1 358 aa17.02■□□□□ 0.32
COL9A1-204ENST00000370496 EHMT1Q9H9B1 1298 aa17.02■□□□□ 0.32
COL9A1-204ENST00000370496 C6orf50Q9HD87 102 aa17.02■□□□□ 0.32
COL9A1-204ENST00000370496 FRMPD4Q14CM0 1322 aa17.02■□□□□ 0.31
COL9A1-204ENST00000370496 ESYT2A0FGR8 921 aa17.02■□□□□ 0.31
COL9A1-204ENST00000370496 CTDNEP1O95476 244 aa17.02■□□□□ 0.31
COL9A1-204ENST00000370496 MYCNP04198 464 aaPredicted RBP17.02■□□□□ 0.31
COL9A1-204ENST00000370496 PGM5Q15124 567 aa17.02■□□□□ 0.31
COL9A1-204ENST00000370496 TEX2Q8IWB9 1127 aa17.02■□□□□ 0.31
COL9A1-204ENST00000370496 WASF1Q92558 559 aa17.02■□□□□ 0.31
COL9A1-204ENST00000370496 CRISPLD2Q9H0B8 497 aa17.02■□□□□ 0.31
COL9A1-204ENST00000370496 XPNPEP3Q9NQH7 507 aa17.02■□□□□ 0.31
COL9A1-204ENST00000370496 ORC3Q9UBD5 711 aaPredicted RBP17.02■□□□□ 0.31
COL9A1-204ENST00000370496 FARP2O94887 1054 aaPredicted RBP17.01■□□□□ 0.31
COL9A1-204ENST00000370496 NR3C2P08235 984 aa17.01■□□□□ 0.31
COL9A1-204ENST00000370496 XBP1P17861 261 aa17.01■□□□□ 0.31
COL9A1-204ENST00000370496 GNA11P29992 359 aa17.01■□□□□ 0.31
COL9A1-204ENST00000370496 ADCYAP1R1P41586 468 aa17.01■□□□□ 0.31
COL9A1-204ENST00000370496 MCM2P49736 904 aa17.01■□□□□ 0.31
COL9A1-204ENST00000370496 ST3GAL1Q11201 340 aa17.01■□□□□ 0.31
COL9A1-204ENST00000370496 LHX8Q68G74 356 aa17.01■□□□□ 0.31
COL9A1-204ENST00000370496 REXO1Q8N1G1 1221 aaKnown RBP17.01■□□□□ 0.31
COL9A1-204ENST00000370496 NSUN7Q8NE18 718 aaKnown RBP17.01■□□□□ 0.31
COL9A1-204ENST00000370496 IL31RAQ8NI17 732 aa17.01■□□□□ 0.31
COL9A1-204ENST00000370496 BICD2Q8TD16 824 aa17.01■□□□□ 0.31
COL9A1-204ENST00000370496 ZMYND12Q9H0C1 365 aa17.01■□□□□ 0.31
COL9A1-204ENST00000370496 SH3GLB2Q9NR46 395 aa17.01■□□□□ 0.31
COL9A1-204ENST00000370496 OGDHLQ9ULD0 1010 aa17.01■□□□□ 0.31
COL9A1-204ENST00000370496 SYNRGQ9UMZ2 1314 aa17■□□□□ 0.31
COL9A1-204ENST00000370496 JAK2O60674 1132 aa17■□□□□ 0.31
COL9A1-204ENST00000370496 DTNBO60941 627 aa17■□□□□ 0.31
COL9A1-204ENST00000370496 CAPN2P17655 700 aa17■□□□□ 0.31
COL9A1-204ENST00000370496 NLRP5P59047 1200 aa17■□□□□ 0.31
COL9A1-204ENST00000370496 TNFAIP2Q03169 654 aa17■□□□□ 0.31
COL9A1-204ENST00000370496 AP3B2Q13367 1082 aa17■□□□□ 0.31
COL9A1-204ENST00000370496 SCFD2Q8WU76 684 aa17■□□□□ 0.31
COL9A1-204ENST00000370496 AIFM3Q96NN9 605 aa17■□□□□ 0.31
COL9A1-204ENST00000370496 PDGFCQ9NRA1 345 aa17■□□□□ 0.31
COL9A1-204ENST00000370496 PCDHA6Q9UN73 950 aa17■□□□□ 0.31
COL9A1-204ENST00000370496 PCDHA8Q9Y5H6 950 aa17■□□□□ 0.31
COL9A1-204ENST00000370496 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.99■□□□□ 0.31
COL9A1-204ENST00000370496 ADCY6O43306 1168 aa16.99■□□□□ 0.31
COL9A1-204ENST00000370496 CD2BP2O95400 341 aaKnown RBP16.99■□□□□ 0.31
COL9A1-204ENST00000370496 TTLL4Q14679 1199 aa16.99■□□□□ 0.31
COL9A1-204ENST00000370496 TAPT1Q6NXT6 567 aa16.99■□□□□ 0.31
COL9A1-204ENST00000370496 SEPT14Q6ZU15 432 aa16.99■□□□□ 0.31
COL9A1-204ENST00000370496 ANKLE1Q8NAG6 615 aa16.99■□□□□ 0.31
COL9A1-204ENST00000370496 PGBD1Q96JS3 809 aa16.99■□□□□ 0.31
COL9A1-204ENST00000370496 ALG1Q9BT22 464 aa16.99■□□□□ 0.31
COL9A1-204ENST00000370496 ANO3Q9BYT9 981 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms