RNA–Protein interactions for RNA: ENST00000370021.1

PRPF38B-201, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best) BASIC

Gene PRPF38B, Length 3,728 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-201ENST00000370021 SCG2P13521 617 aa11.48□□□□□ -0.57
PRPF38B-201ENST00000370021 PLCG1P19174 1290 aa11.48□□□□□ -0.57
PRPF38B-201ENST00000370021 SARNPP82979 210 aaKnown RBP11.48□□□□□ -0.57
PRPF38B-201ENST00000370021 ZFYVE27Q5T4F4 411 aa11.48□□□□□ -0.57
PRPF38B-201ENST00000370021 ALS2CLQ60I27 953 aa11.48□□□□□ -0.57
PRPF38B-201ENST00000370021 NAIF1Q69YI7 327 aaPredicted RBP11.48□□□□□ -0.57
PRPF38B-201ENST00000370021 SGMS1Q86VZ5 419 aa11.48□□□□□ -0.57
PRPF38B-201ENST00000370021 PARP9Q8IXQ6 854 aa11.48□□□□□ -0.57
PRPF38B-201ENST00000370021 ENAHQ8N8S7 591 aaPredicted RBP11.48□□□□□ -0.57
PRPF38B-201ENST00000370021 FAM133AQ8N9E0 248 aa11.48□□□□□ -0.57
PRPF38B-201ENST00000370021 MYCBPAPQ8TBZ2 947 aa11.48□□□□□ -0.57
PRPF38B-201ENST00000370021 MRRFQ96E11 262 aaKnown RBP11.48□□□□□ -0.57
PRPF38B-201ENST00000370021 EPN3Q9H201 632 aa11.48□□□□□ -0.57
PRPF38B-201ENST00000370021 MDH1P40925 334 aaKnown RBP11.48□□□□□ -0.57
PRPF38B-201ENST00000370021 DHX9Q08211 1270 aaKnown RBP11.48□□□□□ -0.57
PRPF38B-201ENST00000370021 ZKSCAN8Q15776 578 aaPredicted RBP11.48□□□□□ -0.57
PRPF38B-201ENST00000370021 ANKS4BQ8N8V4 417 aa11.48□□□□□ -0.57
PRPF38B-201ENST00000370021 ANKRD42Q8N9B4 389 aa11.48□□□□□ -0.57
PRPF38B-201ENST00000370021 NLRP3Q96P20 1036 aa11.48□□□□□ -0.57
PRPF38B-201ENST00000370021 ELAC2Q9BQ52 826 aaKnown RBP11.48□□□□□ -0.57
PRPF38B-201ENST00000370021 LSM14BQ9BX40 385 aaKnown RBP11.48□□□□□ -0.57
PRPF38B-201ENST00000370021 RNF26Q9BY78 433 aaPredicted RBP11.48□□□□□ -0.57
PRPF38B-201ENST00000370021 RGPD2P0DJD1 1756 aa11.48□□□□□ -0.57
PRPF38B-201ENST00000370021 TARSL2A2RTX5 802 aaKnown RBP11.48□□□□□ -0.57
PRPF38B-201ENST00000370021 RPS6KA5O75582 802 aa11.48□□□□□ -0.57
PRPF38B-201ENST00000370021 EEF1GP26641 437 aaKnown RBP11.48□□□□□ -0.57
PRPF38B-201ENST00000370021 UBE4AQ14139 1066 aa11.48□□□□□ -0.57
PRPF38B-201ENST00000370021 PUM3Q15397 648 aaKnown RBP11.48□□□□□ -0.57
PRPF38B-201ENST00000370021 APTXQ7Z2E3 356 aaKnown RBP11.48□□□□□ -0.57
PRPF38B-201ENST00000370021 SUGP1Q8IWZ8 645 aaKnown RBP11.48□□□□□ -0.57
PRPF38B-201ENST00000370021 BLIDQ8IZY5 108 aa11.48□□□□□ -0.57
PRPF38B-201ENST00000370021 GMNCA6NCL1 334 aa11.47□□□□□ -0.57
PRPF38B-201ENST00000370021 UPP2O95045 317 aa11.47□□□□□ -0.57
PRPF38B-201ENST00000370021 AARSP49588 968 aaKnown RBP eCLIP11.47□□□□□ -0.572e-6■■■■■ 27.1
PRPF38B-201ENST00000370021 AMPD3Q01432 767 aa11.47□□□□□ -0.57
PRPF38B-201ENST00000370021 BIRC2Q13490 618 aa11.47□□□□□ -0.57
PRPF38B-201ENST00000370021 FNBP4Q8N3X1 1017 aaPredicted RBP11.47□□□□□ -0.57
PRPF38B-201ENST00000370021 ZKSCAN4Q969J2 545 aaPredicted RBP11.47□□□□□ -0.57
PRPF38B-201ENST00000370021 NDST4Q9H3R1 872 aa11.47□□□□□ -0.57
PRPF38B-201ENST00000370021 DISC1Q9NRI5 854 aa11.47□□□□□ -0.57
PRPF38B-201ENST00000370021 SAMD15Q9P1V8 674 aa11.47□□□□□ -0.57
PRPF38B-201ENST00000370021 BIN2Q9UBW5 565 aaPredicted RBP11.47□□□□□ -0.57
PRPF38B-201ENST00000370021 ASAP1Q9ULH1 1129 aa11.47□□□□□ -0.57
PRPF38B-201ENST00000370021 LMO7Q8WWI1 1683 aa11.47□□□□□ -0.57
PRPF38B-201ENST00000370021 PXDNQ92626 1479 aa11.47□□□□□ -0.57
PRPF38B-201ENST00000370021 ARID4AP29374 1257 aaPredicted RBP11.47□□□□□ -0.57
PRPF38B-201ENST00000370021 EIF6P56537 245 aaKnown RBP11.47□□□□□ -0.57
PRPF38B-201ENST00000370021 SFMBT2Q5VUG0 894 aa11.47□□□□□ -0.57
PRPF38B-201ENST00000370021 PAPD7Q5XG87 772 aaKnown RBP11.47□□□□□ -0.57
PRPF38B-201ENST00000370021 OTUD6AQ7L8S5 288 aa11.47□□□□□ -0.57
PRPF38B-201ENST00000370021 CREG2Q8IUH2 290 aa11.47□□□□□ -0.57
PRPF38B-201ENST00000370021 BMP2KQ9NSY1 1161 aaPredicted RBP11.47□□□□□ -0.57
PRPF38B-201ENST00000370021 RTL9Q8NET4 1388 aa11.47□□□□□ -0.57
PRPF38B-201ENST00000370021 CIAO1O76071 339 aa11.47□□□□□ -0.57
PRPF38B-201ENST00000370021 CYP2D6P10635 497 aa11.47□□□□□ -0.57
PRPF38B-201ENST00000370021 KIF5BP33176 963 aa11.47□□□□□ -0.57
PRPF38B-201ENST00000370021 COPB2P35606 906 aa11.47□□□□□ -0.57
PRPF38B-201ENST00000370021 PTGISQ16647 500 aa11.47□□□□□ -0.57
PRPF38B-201ENST00000370021 CCDC38Q502W7 563 aa11.47□□□□□ -0.57
PRPF38B-201ENST00000370021 ZNF444Q8N0Y2 327 aaPredicted RBP11.47□□□□□ -0.57
PRPF38B-201ENST00000370021 CCDC63Q8NA47 563 aa11.47□□□□□ -0.57
PRPF38B-201ENST00000370021 LPIN2Q92539 896 aa11.47□□□□□ -0.57
PRPF38B-201ENST00000370021 SPDL1Q96EA4 605 aa11.47□□□□□ -0.57
PRPF38B-201ENST00000370021 CYFIP2Q96F07 1278 aa11.47□□□□□ -0.57
PRPF38B-201ENST00000370021 ATP6V1G3Q96LB4 118 aa11.47□□□□□ -0.57
PRPF38B-201ENST00000370021 TFCP2L1Q9NZI6 479 aa11.47□□□□□ -0.57
PRPF38B-201ENST00000370021 L3MBTL1Q9Y468 752 aa11.47□□□□□ -0.57
PRPF38B-201ENST00000370021 NCAPD2Q15021 1401 aa11.47□□□□□ -0.57
PRPF38B-201ENST00000370021 SEMA3EO15041 775 aa11.46□□□□□ -0.57
PRPF38B-201ENST00000370021 TNNI2P48788 182 aa11.46□□□□□ -0.57
PRPF38B-201ENST00000370021 HAUS3Q68CZ6 603 aa11.46□□□□□ -0.57
PRPF38B-201ENST00000370021 SV2BQ7L1I2 683 aa11.46□□□□□ -0.57
PRPF38B-201ENST00000370021 HVCN1Q96D96 273 aa11.46□□□□□ -0.57
PRPF38B-201ENST00000370021 TMEM60Q9H2L4 133 aa11.46□□□□□ -0.57
PRPF38B-201ENST00000370021 AMACRQ9UHK6 382 aa11.46□□□□□ -0.57
PRPF38B-201ENST00000370021 SAP30BPQ9UHR5 308 aaKnown RBP11.46□□□□□ -0.57
PRPF38B-201ENST00000370021 SIPA1L3O60292 1781 aaPredicted RBP11.46□□□□□ -0.57
PRPF38B-201ENST00000370021 DAPK3O43293 454 aa11.46□□□□□ -0.57
PRPF38B-201ENST00000370021 CALRP27797 417 aaKnown RBP11.46□□□□□ -0.57
PRPF38B-201ENST00000370021 TFAP4Q01664 338 aa11.46□□□□□ -0.57
PRPF38B-201ENST00000370021 LRRC14Q15048 493 aa11.46□□□□□ -0.57
PRPF38B-201ENST00000370021 NT5DC1Q5TFE4 455 aa11.46□□□□□ -0.57
PRPF38B-201ENST00000370021 MEX3CQ5U5Q3 659 aaKnown RBP11.46□□□□□ -0.57
PRPF38B-201ENST00000370021 SRBD1Q8N5C6 995 aaKnown RBP11.46□□□□□ -0.57
PRPF38B-201ENST00000370021 TRIM6Q9C030 488 aaPredicted RBP11.46□□□□□ -0.57
PRPF38B-201ENST00000370021 YIPF3Q9GZM5 350 aa11.46□□□□□ -0.57
PRPF38B-201ENST00000370021 DNAJC17Q9NVM6 304 aaKnown RBP11.46□□□□□ -0.57
PRPF38B-201ENST00000370021 EPHB6O15197 1021 aa11.46□□□□□ -0.58
PRPF38B-201ENST00000370021 RAD51CO43502 376 aa11.46□□□□□ -0.58
PRPF38B-201ENST00000370021 PEX26Q7Z412 305 aa11.46□□□□□ -0.58
PRPF38B-201ENST00000370021 ADSSL1Q8N142 457 aa11.46□□□□□ -0.58
PRPF38B-201ENST00000370021 MTMR8Q96EF0 704 aa11.46□□□□□ -0.58
PRPF38B-201ENST00000370021 PYM1Q9BRP8 204 aaKnown RBP11.46□□□□□ -0.58
PRPF38B-201ENST00000370021 ZNF233A6NK53 670 aa11.45□□□□□ -0.58
PRPF38B-201ENST00000370021 PLTPP55058 493 aa11.45□□□□□ -0.58
PRPF38B-201ENST00000370021 CASP7P55210 303 aa11.45□□□□□ -0.58
PRPF38B-201ENST00000370021 CTSWP56202 376 aa11.45□□□□□ -0.58
PRPF38B-201ENST00000370021 EVX2Q03828 476 aa11.45□□□□□ -0.58
PRPF38B-201ENST00000370021 CYB5D1Q6P9G0 228 aa11.45□□□□□ -0.58
PRPF38B-201ENST00000370021 RUFY4Q6ZNE9 571 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms