RNA–Protein interactions for RNA: ENST00000369746.2

UBE3D-202, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 2,740 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-202ENST00000369746 TGIF2Q9GZN2 237 aa5.7□□□□□ -1.5
UBE3D-202ENST00000369746 RBSNQ9H1K0 784 aa5.7□□□□□ -1.5
UBE3D-202ENST00000369746 ZSCAN16Q9H4T2 348 aaPredicted RBP5.7□□□□□ -1.5
UBE3D-202ENST00000369746 TOMM22Q9NS69 142 aa5.7□□□□□ -1.5
UBE3D-202ENST00000369746 CPSF2Q9P2I0 782 aaKnown RBP5.7□□□□□ -1.5
UBE3D-202ENST00000369746 FBXO2Q9UK22 296 aaPredicted RBP5.7□□□□□ -1.5
UBE3D-202ENST00000369746 PCDHGB3Q9Y5G1 929 aa5.7□□□□□ -1.5
UBE3D-202ENST00000369746 MED23Q9ULK4 1368 aa5.7□□□□□ -1.5
UBE3D-202ENST00000369746 MGAMO43451 1857 aa5.7□□□□□ -1.5
UBE3D-202ENST00000369746 A0A087WUV0 522 aaPredicted RBP5.69□□□□□ -1.5
UBE3D-202ENST00000369746 H7C1W4 665 aa5.69□□□□□ -1.5
UBE3D-202ENST00000369746 STXBP3O00186 592 aa5.69□□□□□ -1.5
UBE3D-202ENST00000369746 SGPL1O95470 568 aa5.69□□□□□ -1.5
UBE3D-202ENST00000369746 RPL17P18621 184 aaKnown RBP5.69□□□□□ -1.5
UBE3D-202ENST00000369746 CTHP32929 405 aa5.69□□□□□ -1.5
UBE3D-202ENST00000369746 KIF5BP33176 963 aa5.69□□□□□ -1.5
UBE3D-202ENST00000369746 RDXP35241 583 aaKnown RBP5.69□□□□□ -1.5
UBE3D-202ENST00000369746 MYBPC3Q14896 1274 aa5.69□□□□□ -1.5
UBE3D-202ENST00000369746 C10orf76Q5T2E6 689 aa5.69□□□□□ -1.5
UBE3D-202ENST00000369746 C1orf53Q5VUE5 145 aa5.69□□□□□ -1.5
UBE3D-202ENST00000369746 CPLX2Q6PUV4 134 aaKnown RBP5.69□□□□□ -1.5
UBE3D-202ENST00000369746 CYP26C1Q6V0L0 522 aa5.69□□□□□ -1.5
UBE3D-202ENST00000369746 DPP8Q6V1X1 898 aaPredicted RBP5.69□□□□□ -1.5
UBE3D-202ENST00000369746 ERMP1Q7Z2K6 904 aa5.69□□□□□ -1.5
UBE3D-202ENST00000369746 METTL3Q86U44 580 aaKnown RBP5.69□□□□□ -1.5
UBE3D-202ENST00000369746 TRPM4Q8TD43 1214 aa5.69□□□□□ -1.5
UBE3D-202ENST00000369746 USP33Q8TEY7 942 aa5.69□□□□□ -1.5
UBE3D-202ENST00000369746 HDAC7Q8WUI4 952 aa5.69□□□□□ -1.5
UBE3D-202ENST00000369746 DNAAF4Q8WXU2 420 aa5.69□□□□□ -1.5
UBE3D-202ENST00000369746 ASIC4Q96FT7 647 aa5.69□□□□□ -1.5
UBE3D-202ENST00000369746 FRMD6Q96NE9 622 aa5.69□□□□□ -1.5
UBE3D-202ENST00000369746 NLRP3Q96P20 1036 aa5.69□□□□□ -1.5
UBE3D-202ENST00000369746 GSDMAQ96QA5 445 aa5.69□□□□□ -1.5
UBE3D-202ENST00000369746 CRBNQ96SW2 442 aa5.69□□□□□ -1.5
UBE3D-202ENST00000369746 THUMPD2Q9BTF0 503 aaKnown RBP5.69□□□□□ -1.5
UBE3D-202ENST00000369746 TMEM165Q9HC07 324 aa5.69□□□□□ -1.5
UBE3D-202ENST00000369746 TRPV5Q9NQA5 729 aa5.69□□□□□ -1.5
UBE3D-202ENST00000369746 UBAP1Q9NZ09 502 aa5.69□□□□□ -1.5
UBE3D-202ENST00000369746 CEP72Q9P209 647 aa5.69□□□□□ -1.5
UBE3D-202ENST00000369746 MAFBQ9Y5Q3 323 aaPredicted RBP5.69□□□□□ -1.5
UBE3D-202ENST00000369746 SASH1O94885 1247 aa5.69□□□□□ -1.5
UBE3D-202ENST00000369746 FARP2O94887 1054 aaPredicted RBP5.69□□□□□ -1.5
UBE3D-202ENST00000369746 SNUPNO95149 360 aaKnown RBP5.69□□□□□ -1.5
UBE3D-202ENST00000369746 MBD3O95983 291 aa5.69□□□□□ -1.5
UBE3D-202ENST00000369746 TUBB4AP04350 444 aa5.69□□□□□ -1.5
UBE3D-202ENST00000369746 CCDC159P0C7I6 412 aa5.69□□□□□ -1.5
UBE3D-202ENST00000369746 IDEP14735 1019 aa5.69□□□□□ -1.5
UBE3D-202ENST00000369746 EN2P19622 333 aaPredicted RBP5.69□□□□□ -1.5
UBE3D-202ENST00000369746 SERPINB3P29508 390 aa5.69□□□□□ -1.5
UBE3D-202ENST00000369746 IL13P35225 146 aa5.69□□□□□ -1.5
UBE3D-202ENST00000369746 RAB27AP51159 221 aa5.69□□□□□ -1.5
UBE3D-202ENST00000369746 SESN3P58005 492 aa5.69□□□□□ -1.5
UBE3D-202ENST00000369746 GOLGA2Q08379 1002 aa5.69□□□□□ -1.5
UBE3D-202ENST00000369746 RRS1Q15050 365 aaKnown RBP5.69□□□□□ -1.5
UBE3D-202ENST00000369746 ALFQ53S48 1182 aa5.69□□□□□ -1.5
UBE3D-202ENST00000369746 NFXL1Q6ZNB6 911 aa5.69□□□□□ -1.5
UBE3D-202ENST00000369746 NEK10Q6ZWH5 1172 aa5.69□□□□□ -1.5
UBE3D-202ENST00000369746 TMEM151BQ8IW70 566 aa5.69□□□□□ -1.5
UBE3D-202ENST00000369746 CPXCR1Q8N123 301 aa5.69□□□□□ -1.5
UBE3D-202ENST00000369746 DEFB123Q8N688 67 aa5.69□□□□□ -1.5
UBE3D-202ENST00000369746 USHBP1Q8N6Y0 703 aa5.69□□□□□ -1.5
UBE3D-202ENST00000369746 LILRB1Q8NHL6 650 aaPredicted RBP5.69□□□□□ -1.5
UBE3D-202ENST00000369746 L3MBTL2Q969R5 705 aa5.69□□□□□ -1.5
UBE3D-202ENST00000369746 SELENOOQ9BVL4 669 aa5.69□□□□□ -1.5
UBE3D-202ENST00000369746 FANCFQ9NPI8 374 aa5.69□□□□□ -1.5
UBE3D-202ENST00000369746 PAK6Q9NQU5 681 aaPredicted RBP5.69□□□□□ -1.5
UBE3D-202ENST00000369746 ALPK3Q96L96 1907 aa5.69□□□□□ -1.5
UBE3D-202ENST00000369746 PDLIM1O00151 329 aa5.68□□□□□ -1.5
UBE3D-202ENST00000369746 NTSR2O95665 410 aa5.68□□□□□ -1.5
UBE3D-202ENST00000369746 ABL1P00519 1130 aa5.68□□□□□ -1.5
UBE3D-202ENST00000369746 MSL3P1P0C860 447 aa5.68□□□□□ -1.5
UBE3D-202ENST00000369746 MYBL2P10244 700 aa5.68□□□□□ -1.5
UBE3D-202ENST00000369746 MTHFD1P11586 935 aaKnown RBP5.68□□□□□ -1.5
UBE3D-202ENST00000369746 PSMA3P25788 255 aa5.68□□□□□ -1.5
UBE3D-202ENST00000369746 CASP2P42575 452 aa5.68□□□□□ -1.5
UBE3D-202ENST00000369746 IREB2P48200 963 aaKnown RBP5.68□□□□□ -1.5
UBE3D-202ENST00000369746 KIF11P52732 1056 aa5.68□□□□□ -1.5
UBE3D-202ENST00000369746 COX10Q12887 443 aa5.68□□□□□ -1.5
UBE3D-202ENST00000369746 TRIM28Q13263 835 aaKnown RBP5.68□□□□□ -1.5
UBE3D-202ENST00000369746 WDR45BQ5MNZ6 344 aa5.68□□□□□ -1.5
UBE3D-202ENST00000369746 FKBP1CQ5VVH2 108 aa5.68□□□□□ -1.5
UBE3D-202ENST00000369746 PPP4R3AQ6IN85 833 aa5.68□□□□□ -1.5
UBE3D-202ENST00000369746 GIMAP7Q8NHV1 300 aa5.68□□□□□ -1.5
UBE3D-202ENST00000369746 TTC8Q8TAM2 541 aa5.68□□□□□ -1.5
UBE3D-202ENST00000369746 MRIQ9BWK5 157 aa5.68□□□□□ -1.5
UBE3D-202ENST00000369746 CARD11Q9BXL7 1154 aa5.68□□□□□ -1.5
UBE3D-202ENST00000369746 PLEKHA5Q9HAU0 1116 aa5.68□□□□□ -1.5
UBE3D-202ENST00000369746 EPB41L4AQ9HCS5 686 aaPredicted RBP5.68□□□□□ -1.5
UBE3D-202ENST00000369746 PARP2Q9UGN5 583 aa5.68□□□□□ -1.5
UBE3D-202ENST00000369746 SRRDQ9UH36 339 aa5.68□□□□□ -1.5
UBE3D-202ENST00000369746 ELP1O95163 1332 aa5.68□□□□□ -1.5
UBE3D-202ENST00000369746 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.68□□□□□ -1.5
UBE3D-202ENST00000369746 RTCAO00442 366 aaKnown RBP5.68□□□□□ -1.5
UBE3D-202ENST00000369746 ELF1P32519 619 aa5.68□□□□□ -1.5
UBE3D-202ENST00000369746 ACTN2P35609 894 aa5.68□□□□□ -1.5
UBE3D-202ENST00000369746 HALP42357 657 aa5.68□□□□□ -1.5
UBE3D-202ENST00000369746 MASP1P48740 699 aa5.68□□□□□ -1.5
UBE3D-202ENST00000369746 MRPL28Q13084 256 aaKnown RBP5.68□□□□□ -1.5
UBE3D-202ENST00000369746 EIF2B5Q13144 721 aaKnown RBP5.68□□□□□ -1.5
UBE3D-202ENST00000369746 MAP7D1Q3KQU3 841 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms