RNA–Protein interactions for RNA: ENST00000369071.4

LINC01561-201, Transcript of long intergenic non-protein coding RNA 1561, humanhuman

BASIC

Gene LINC01561, Length 2,176 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561-201ENST00000369071 USP17L1Q7RTZ2 530 aa13.96□□□□□ -0.17
LINC01561-201ENST00000369071 DYNLL2Q96FJ2 89 aa13.96□□□□□ -0.17
LINC01561-201ENST00000369071 DRC1Q96MC2 740 aa13.96□□□□□ -0.17
LINC01561-201ENST00000369071 GRIN2DO15399 1336 aa13.96□□□□□ -0.17
LINC01561-201ENST00000369071 A0A087WUV0 522 aaPredicted RBP13.96□□□□□ -0.18
LINC01561-201ENST00000369071 CCNT1O60563 726 aaKnown RBP13.96□□□□□ -0.18
LINC01561-201ENST00000369071 HIBADHP31937 336 aaKnown RBP13.96□□□□□ -0.18
LINC01561-201ENST00000369071 SLC7A5Q01650 507 aa13.96□□□□□ -0.18
LINC01561-201ENST00000369071 EMBQ6PCB8 327 aa13.96□□□□□ -0.18
LINC01561-201ENST00000369071 GBP6Q6ZN66 633 aa13.96□□□□□ -0.18
LINC01561-201ENST00000369071 KRT25Q7Z3Z0 450 aa13.96□□□□□ -0.18
LINC01561-201ENST00000369071 TSEN2Q8NCE0 465 aaKnown RBP13.96□□□□□ -0.18
LINC01561-201ENST00000369071 CAVIN3Q969G5 261 aa13.96□□□□□ -0.18
LINC01561-201ENST00000369071 CAPS2Q9BXY5 557 aa13.96□□□□□ -0.18
LINC01561-201ENST00000369071 SLC39A2Q9NP94 309 aa13.96□□□□□ -0.18
LINC01561-201ENST00000369071 FAM207AQ9NSI2 230 aaPredicted RBP13.96□□□□□ -0.18
LINC01561-201ENST00000369071 SMARCAL1Q9NZC9 954 aa13.96□□□□□ -0.18
LINC01561-201ENST00000369071 TFCP2L1Q9NZI6 479 aa13.96□□□□□ -0.18
LINC01561-201ENST00000369071 STIM2Q9P246 746 aa13.96□□□□□ -0.18
LINC01561-201ENST00000369071 SALL4Q9UJQ4 1053 aa13.96□□□□□ -0.18
LINC01561-201ENST00000369071 ZNF652Q9Y2D9 606 aa13.96□□□□□ -0.18
LINC01561-201ENST00000369071 ABCB11O95342 1321 aa13.96□□□□□ -0.18
LINC01561-201ENST00000369071 ROBO3Q96MS0 1386 aa13.95□□□□□ -0.18
LINC01561-201ENST00000369071 MRPS25P82663 173 aaKnown RBP13.95□□□□□ -0.18
LINC01561-201ENST00000369071 MAN2A1Q16706 1144 aa13.95□□□□□ -0.18
LINC01561-201ENST00000369071 ASTE1Q2TB18 679 aaPredicted RBP13.95□□□□□ -0.18
LINC01561-201ENST00000369071 LETM2Q2VYF4 491 aa13.95□□□□□ -0.18
LINC01561-201ENST00000369071 ALS2CLQ60I27 953 aa13.95□□□□□ -0.18
LINC01561-201ENST00000369071 CLEC4GQ6UXB4 293 aa13.95□□□□□ -0.18
LINC01561-201ENST00000369071 BAP1Q92560 729 aa13.95□□□□□ -0.18
LINC01561-201ENST00000369071 ALS2CR12Q96Q35 445 aa13.95□□□□□ -0.18
LINC01561-201ENST00000369071 EHD4Q9H223 541 aa13.95□□□□□ -0.18
LINC01561-201ENST00000369071 EHD2Q9NZN4 543 aa13.95□□□□□ -0.18
LINC01561-201ENST00000369071 COL14A1Q05707 1796 aaKnown RBP13.95□□□□□ -0.18
LINC01561-201ENST00000369071 LRRC53A6NM62 1247 aa13.95□□□□□ -0.18
LINC01561-201ENST00000369071 EIF3HO15372 352 aaKnown RBP eCLIP13.95□□□□□ -0.18
LINC01561-201ENST00000369071 OPA1O60313 960 aa13.95□□□□□ -0.18
LINC01561-201ENST00000369071 CXCR5P32302 372 aa13.95□□□□□ -0.18
LINC01561-201ENST00000369071 TECP42680 631 aa13.95□□□□□ -0.18
LINC01561-201ENST00000369071 MATR3P43243 847 aaKnown RBP eCLIP13.95□□□□□ -0.18
LINC01561-201ENST00000369071 CCT5P48643 541 aa13.95□□□□□ -0.18
LINC01561-201ENST00000369071 NONOQ15233 471 aaKnown RBP eCLIP13.95□□□□□ -0.18
LINC01561-201ENST00000369071 TADA2BQ86TJ2 420 aa13.95□□□□□ -0.18
LINC01561-201ENST00000369071 TMEM47Q9BQJ4 181 aa13.95□□□□□ -0.18
LINC01561-201ENST00000369071 LZTS2Q9BRK4 669 aa13.95□□□□□ -0.18
LINC01561-201ENST00000369071 TLR10Q9BXR5 811 aa13.95□□□□□ -0.18
LINC01561-201ENST00000369071 FAM107BQ9H098 131 aa13.95□□□□□ -0.18
LINC01561-201ENST00000369071 DEF6Q9H4E7 631 aa13.95□□□□□ -0.18
LINC01561-201ENST00000369071 WNK3Q9BYP7 1800 aa13.94□□□□□ -0.18
LINC01561-201ENST00000369071 NCK2O43639 380 aa13.94□□□□□ -0.18
LINC01561-201ENST00000369071 AKR1B10O60218 316 aa13.94□□□□□ -0.18
LINC01561-201ENST00000369071 MAGEA1P43355 309 aa13.94□□□□□ -0.18
LINC01561-201ENST00000369071 SKOR1P84550 965 aa13.94□□□□□ -0.18
LINC01561-201ENST00000369071 SKIDA1Q1XH10 827 aa13.94□□□□□ -0.18
LINC01561-201ENST00000369071 TTMPQ5BVD1 217 aa13.94□□□□□ -0.18
LINC01561-201ENST00000369071 RRAGAQ7L523 313 aa13.94□□□□□ -0.18
LINC01561-201ENST00000369071 CCDC84Q86UT8 332 aaPredicted RBP13.94□□□□□ -0.18
LINC01561-201ENST00000369071 MMRN2Q9H8L6 949 aa13.94□□□□□ -0.18
LINC01561-201ENST00000369071 BLOC1S4Q9NUP1 217 aa13.94□□□□□ -0.18
LINC01561-201ENST00000369071 MYMKA6NI61 221 aa13.93□□□□□ -0.18
LINC01561-201ENST00000369071 NAPAP54920 295 aa13.93□□□□□ -0.18
LINC01561-201ENST00000369071 GNGT1P63211 74 aa13.93□□□□□ -0.18
LINC01561-201ENST00000369071 GRB10Q13322 594 aa13.93□□□□□ -0.18
LINC01561-201ENST00000369071 NNTQ13423 1086 aa13.93□□□□□ -0.18
LINC01561-201ENST00000369071 SF3B2Q13435 895 aaKnown RBP13.93□□□□□ -0.18
LINC01561-201ENST00000369071 CCDC181Q5TID7 509 aa13.93□□□□□ -0.18
LINC01561-201ENST00000369071 KLHDC7AQ5VTJ3 777 aa13.93□□□□□ -0.18
LINC01561-201ENST00000369071 ICE2Q659A1 982 aa13.93□□□□□ -0.18
LINC01561-201ENST00000369071 PDXDC1Q6P996 788 aa13.93□□□□□ -0.18
LINC01561-201ENST00000369071 UNC13DQ70J99 1090 aa13.93□□□□□ -0.18
LINC01561-201ENST00000369071 SV2BQ7L1I2 683 aa13.93□□□□□ -0.18
LINC01561-201ENST00000369071 NEK8Q86SG6 692 aa13.93□□□□□ -0.18
LINC01561-201ENST00000369071 CCDC155Q8N6L0 562 aa13.93□□□□□ -0.18
LINC01561-201ENST00000369071 ARL8AQ96BM9 186 aa13.93□□□□□ -0.18
LINC01561-201ENST00000369071 MTMR8Q96EF0 704 aa13.93□□□□□ -0.18
LINC01561-201ENST00000369071 CALML4Q96GE6 196 aa13.93□□□□□ -0.18
LINC01561-201ENST00000369071 PSMB7Q99436 277 aa13.93□□□□□ -0.18
LINC01561-201ENST00000369071 SPZ1Q9BXG8 430 aa13.93□□□□□ -0.18
LINC01561-201ENST00000369071 MKNK2Q9HBH9 465 aa13.93□□□□□ -0.18
LINC01561-201ENST00000369071 RBM12Q9NTZ6 932 aaKnown RBP13.93□□□□□ -0.18
LINC01561-201ENST00000369071 CCDC88AQ3V6T2 1871 aa13.93□□□□□ -0.18
LINC01561-201ENST00000369071 ROBO1Q9Y6N7 1651 aa13.93□□□□□ -0.18
LINC01561-201ENST00000369071 PVALEFA0A1B0GWK0 134 aa13.93□□□□□ -0.18
LINC01561-201ENST00000369071 SMCO2A6NFE2 343 aa13.93□□□□□ -0.18
LINC01561-201ENST00000369071 KLRF2D3W0D1 207 aa13.93□□□□□ -0.18
LINC01561-201ENST00000369071 GOLGA8HP0CJ92 632 aa13.93□□□□□ -0.18
LINC01561-201ENST00000369071 TSPY3P0CV98 308 aa13.93□□□□□ -0.18
LINC01561-201ENST00000369071 TSPY8P0CW00 308 aa13.93□□□□□ -0.18
LINC01561-201ENST00000369071 PAFAH1B1P43034 410 aa13.93□□□□□ -0.18
LINC01561-201ENST00000369071 GLE1Q53GS7 698 aaKnown RBP13.93□□□□□ -0.18
LINC01561-201ENST00000369071 SLC10A5Q5PT55 438 aa13.93□□□□□ -0.18
LINC01561-201ENST00000369071 HGSNATQ68CP4 663 aa13.93□□□□□ -0.18
LINC01561-201ENST00000369071 GUF1Q8N442 669 aaKnown RBP13.93□□□□□ -0.18
LINC01561-201ENST00000369071 BCAS4Q8TDM0 211 aa13.93□□□□□ -0.18
LINC01561-201ENST00000369071 ACSBG1Q96GR2 724 aa13.93□□□□□ -0.18
LINC01561-201ENST00000369071 MTMR7Q9Y216 660 aa13.93□□□□□ -0.18
LINC01561-201ENST00000369071 EBAG9O00559 213 aa13.92□□□□□ -0.18
LINC01561-201ENST00000369071 HSF2BPO75031 334 aa13.92□□□□□ -0.18
LINC01561-201ENST00000369071 RPS8P62241 208 aaKnown RBP13.92□□□□□ -0.18
LINC01561-201ENST00000369071 GFPT1Q06210 699 aaPredicted RBP13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 160.8 ms