RNA–Protein interactions for RNA: ENST00000368912.7

SEMA6C-202, Transcript of semaphorin 6C, humanhuman

TSL 1 (best)

Gene SEMA6C, Length 3,697 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-202ENST00000368912 USP28Q96RU2 1077 aa17.05■□□□□ 0.32
SEMA6C-202ENST00000368912 NUP88Q99567 741 aaPredicted RBP17.05■□□□□ 0.32
SEMA6C-202ENST00000368912 ZNF408Q9H9D4 720 aa17.05■□□□□ 0.32
SEMA6C-202ENST00000368912 ZNF287Q9HBT7 754 aa17.05■□□□□ 0.32
SEMA6C-202ENST00000368912 HPS5Q9UPZ3 1129 aa17.05■□□□□ 0.32
SEMA6C-202ENST00000368912 CTAGE15A4D2H0 777 aa17.05■□□□□ 0.32
SEMA6C-202ENST00000368912 CTAGE8P0CG41 777 aa17.05■□□□□ 0.32
SEMA6C-202ENST00000368912 IL1R1P14778 569 aa17.05■□□□□ 0.32
SEMA6C-202ENST00000368912 TTLL12Q14166 644 aaPredicted RBP17.05■□□□□ 0.32
SEMA6C-202ENST00000368912 DLK2Q6UY11 383 aa17.05■□□□□ 0.32
SEMA6C-202ENST00000368912 CTAGE6Q86UF2 777 aa17.05■□□□□ 0.32
SEMA6C-202ENST00000368912 CDAN1Q8IWY9 1227 aa17.05■□□□□ 0.32
SEMA6C-202ENST00000368912 CTAGE4Q8IX94 777 aa17.05■□□□□ 0.32
SEMA6C-202ENST00000368912 RTKN2Q8IZC4 609 aa17.05■□□□□ 0.32
SEMA6C-202ENST00000368912 SUPT20HQ8NEM7 779 aa17.05■□□□□ 0.32
SEMA6C-202ENST00000368912 BICD1Q96G01 975 aa17.05■□□□□ 0.32
SEMA6C-202ENST00000368912 RUFY1Q96T51 708 aa17.05■□□□□ 0.32
SEMA6C-202ENST00000368912 TSC22D3Q99576 134 aa17.05■□□□□ 0.32
SEMA6C-202ENST00000368912 KCND1Q9NSA2 647 aa17.05■□□□□ 0.32
SEMA6C-202ENST00000368912 GOLGA6L10A6NI86 522 aa17.04■□□□□ 0.32
SEMA6C-202ENST00000368912 MAGEA8P43361 318 aa17.04■□□□□ 0.32
SEMA6C-202ENST00000368912 CXCL9Q07325 125 aa17.04■□□□□ 0.32
SEMA6C-202ENST00000368912 DYDC1Q8WWB3 177 aa17.04■□□□□ 0.32
SEMA6C-202ENST00000368912 SPAG5Q96R06 1193 aa17.04■□□□□ 0.32
SEMA6C-202ENST00000368912 TMEM39BQ9GZU3 492 aa17.04■□□□□ 0.32
SEMA6C-202ENST00000368912 ANKZF1Q9H8Y5 726 aa17.04■□□□□ 0.32
SEMA6C-202ENST00000368912 ATP6V0A4Q9HBG4 840 aa17.04■□□□□ 0.32
SEMA6C-202ENST00000368912 THSD7AQ9UPZ6 1657 aa17.04■□□□□ 0.32
SEMA6C-202ENST00000368912 FANCGO15287 622 aa17.04■□□□□ 0.32
SEMA6C-202ENST00000368912 SCNN1BP51168 640 aa17.04■□□□□ 0.32
SEMA6C-202ENST00000368912 SMTNP53814 917 aa17.04■□□□□ 0.32
SEMA6C-202ENST00000368912 SLC8A3P57103 927 aa17.04■□□□□ 0.32
SEMA6C-202ENST00000368912 PPFIA1Q13136 1202 aa17.04■□□□□ 0.32
SEMA6C-202ENST00000368912 CIAPIN1Q6FI81 312 aa17.04■□□□□ 0.32
SEMA6C-202ENST00000368912 DIS3L2Q8IYB7 885 aaKnown RBP17.04■□□□□ 0.32
SEMA6C-202ENST00000368912 FHDC1Q9C0D6 1143 aaPredicted RBP17.04■□□□□ 0.32
SEMA6C-202ENST00000368912 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.04■□□□□ 0.32
SEMA6C-202ENST00000368912 DDTLA6NHG4 134 aaPredicted RBP17.03■□□□□ 0.32
SEMA6C-202ENST00000368912 FSBPO95073 299 aa17.03■□□□□ 0.32
SEMA6C-202ENST00000368912 RTN3O95197 1032 aaPredicted RBP17.03■□□□□ 0.32
SEMA6C-202ENST00000368912 NSMCE1Q8WV22 266 aa17.03■□□□□ 0.32
SEMA6C-202ENST00000368912 LEO1Q8WVC0 666 aaPredicted RBP17.03■□□□□ 0.32
SEMA6C-202ENST00000368912 DESI2Q9BSY9 194 aa17.03■□□□□ 0.32
SEMA6C-202ENST00000368912 TOP1P11387 765 aaKnown RBP17.03■□□□□ 0.32
SEMA6C-202ENST00000368912 FDPSP14324 419 aaKnown RBP17.03■□□□□ 0.32
SEMA6C-202ENST00000368912 VEGFAP15692 232 aaPredicted RBP17.03■□□□□ 0.32
SEMA6C-202ENST00000368912 XBP1P17861 261 aa17.03■□□□□ 0.32
SEMA6C-202ENST00000368912 PGBD1Q96JS3 809 aa17.03■□□□□ 0.32
SEMA6C-202ENST00000368912 SPON1Q9HCB6 807 aa17.03■□□□□ 0.32
SEMA6C-202ENST00000368912 POLD4Q9HCU8 107 aa17.03■□□□□ 0.32
SEMA6C-202ENST00000368912 A0A1B0GVL5 298 aa17.03■□□□□ 0.32
SEMA6C-202ENST00000368912 CCDC13Q8IYE1 715 aa17.03■□□□□ 0.32
SEMA6C-202ENST00000368912 SMARCC2Q8TAQ2 1214 aa17.03■□□□□ 0.32
SEMA6C-202ENST00000368912 IRX2Q9BZI1 471 aaPredicted RBP17.03■□□□□ 0.32
SEMA6C-202ENST00000368912 BATF3Q9NR55 127 aa17.03■□□□□ 0.32
SEMA6C-202ENST00000368912 RGL1Q9NZL6 768 aa17.03■□□□□ 0.32
SEMA6C-202ENST00000368912 GGCXP38435 758 aa17.02■□□□□ 0.32
SEMA6C-202ENST00000368912 FNTAP49354 379 aa17.02■□□□□ 0.32
SEMA6C-202ENST00000368912 PLIN2Q99541 437 aa17.02■□□□□ 0.32
SEMA6C-202ENST00000368912 BLOC1S6Q9UL45 172 aa17.02■□□□□ 0.32
SEMA6C-202ENST00000368912 SPEF2Q9C093 1822 aa17.02■□□□□ 0.32
SEMA6C-202ENST00000368912 RFX7Q2KHR2 1363 aa17.02■□□□□ 0.32
SEMA6C-202ENST00000368912 ATP1A2P50993 1020 aa17.02■□□□□ 0.32
SEMA6C-202ENST00000368912 PDCLQ13371 301 aa17.02■□□□□ 0.32
SEMA6C-202ENST00000368912 CERKLQ49MI3 558 aaPredicted RBP17.02■□□□□ 0.32
SEMA6C-202ENST00000368912 EAPPQ56P03 285 aaPredicted RBP17.02■□□□□ 0.32
SEMA6C-202ENST00000368912 GPR75-ASB3A0A0A6YYF3 556 aa17.02■□□□□ 0.31
SEMA6C-202ENST00000368912 RBM47A0AV96 593 aaKnown RBP17.02■□□□□ 0.31
SEMA6C-202ENST00000368912 GOLGA6L9A6NEM1 432 aa17.02■□□□□ 0.31
SEMA6C-202ENST00000368912 CUTAO60888 179 aa17.02■□□□□ 0.31
SEMA6C-202ENST00000368912 TAL1P17542 331 aaPredicted RBP17.02■□□□□ 0.31
SEMA6C-202ENST00000368912 PAPOLAP51003 745 aaKnown RBP17.02■□□□□ 0.31
SEMA6C-202ENST00000368912 ZNF174Q15697 407 aa17.02■□□□□ 0.31
SEMA6C-202ENST00000368912 ALX1Q15699 326 aa17.02■□□□□ 0.31
SEMA6C-202ENST00000368912 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.02■□□□□ 0.31
SEMA6C-202ENST00000368912 PAPOLBQ9NRJ5 636 aaKnown RBP17.02■□□□□ 0.31
SEMA6C-202ENST00000368912 HOMER3Q9NSC5 361 aa17.02■□□□□ 0.31
SEMA6C-202ENST00000368912 CLEC11AQ9Y240 323 aa17.02■□□□□ 0.31
SEMA6C-202ENST00000368912 VWA3AA6NCI4 1184 aa17.01■□□□□ 0.31
SEMA6C-202ENST00000368912 FAM205CA6NFA0 338 aa17.01■□□□□ 0.31
SEMA6C-202ENST00000368912 EIF3HO15372 352 aaKnown RBP eCLIP17.01■□□□□ 0.31
SEMA6C-202ENST00000368912 GNAT1P11488 350 aa17.01■□□□□ 0.31
SEMA6C-202ENST00000368912 SEPT2Q15019 361 aa17.01■□□□□ 0.31
SEMA6C-202ENST00000368912 USH1GQ495M9 461 aa17.01■□□□□ 0.31
SEMA6C-202ENST00000368912 CYB5D1Q6P9G0 228 aa17.01■□□□□ 0.31
SEMA6C-202ENST00000368912 NCAPG2Q86XI2 1143 aa17.01■□□□□ 0.31
SEMA6C-202ENST00000368912 FSIP1Q8NA03 581 aa17.01■□□□□ 0.31
SEMA6C-202ENST00000368912 OXER1Q8TDS5 423 aa17.01■□□□□ 0.31
SEMA6C-202ENST00000368912 CLIC4Q9Y696 253 aa17.01■□□□□ 0.31
SEMA6C-202ENST00000368912 ZMYM6O95789 1325 aa17.01■□□□□ 0.31
SEMA6C-202ENST00000368912 FMNL1O95466 1100 aaPredicted RBP17.01■□□□□ 0.31
SEMA6C-202ENST00000368912 FAM163BP0C2L3 166 aa17.01■□□□□ 0.31
SEMA6C-202ENST00000368912 ACCSLQ4AC99 568 aa17.01■□□□□ 0.31
SEMA6C-202ENST00000368912 STRIP1Q5VSL9 837 aa17.01■□□□□ 0.31
SEMA6C-202ENST00000368912 ARHGAP22Q7Z5H3 698 aa17.01■□□□□ 0.31
SEMA6C-202ENST00000368912 EPAS1Q99814 870 aa17.01■□□□□ 0.31
SEMA6C-202ENST00000368912 TMEM47Q9BQJ4 181 aa17.01■□□□□ 0.31
SEMA6C-202ENST00000368912 GH2P01242 217 aa17.01■□□□□ 0.31
SEMA6C-202ENST00000368912 DACT2Q5SW24 774 aa17.01■□□□□ 0.31
SEMA6C-202ENST00000368912 SLC16A10Q8TF71 515 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms