RNA–Protein interactions for RNA: ENST00000368533.7

TPM3-212, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 3,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-212ENST00000368533 MYL5Q02045 173 aa11.98□□□□□ -0.49
TPM3-212ENST00000368533 FAM177A1Q8N128 213 aaPredicted RBP11.98□□□□□ -0.49
TPM3-212ENST00000368533 CCDC150Q8NCX0 1101 aa11.98□□□□□ -0.49
TPM3-212ENST00000368533 CCDC34Q96HJ3 373 aa11.98□□□□□ -0.49
TPM3-212ENST00000368533 ARHGEF10LQ9HCE6 1279 aa11.98□□□□□ -0.49
TPM3-212ENST00000368533 HPSEQ9Y251 543 aa11.98□□□□□ -0.49
TPM3-212ENST00000368533 SLU7O95391 586 aaKnown RBP11.97□□□□□ -0.49
TPM3-212ENST00000368533 GNA11P29992 359 aa11.97□□□□□ -0.49
TPM3-212ENST00000368533 ARHGAP29Q52LW3 1261 aa11.97□□□□□ -0.49
TPM3-212ENST00000368533 ARMCX5Q6P1M9 558 aa11.97□□□□□ -0.49
TPM3-212ENST00000368533 WRNIP1Q96S55 665 aa11.97□□□□□ -0.49
TPM3-212ENST00000368533 FANCLQ9NW38 375 aa11.97□□□□□ -0.49
TPM3-212ENST00000368533 HOOK1Q9UJC3 728 aaKnown RBP11.97□□□□□ -0.49
TPM3-212ENST00000368533 PRR12Q9ULL5 1215 aa11.97□□□□□ -0.49
TPM3-212ENST00000368533 POLR2AP24928 1970 aaKnown RBP11.97□□□□□ -0.49
TPM3-212ENST00000368533 PEX10O60683 326 aa11.97□□□□□ -0.49
TPM3-212ENST00000368533 LMNB1P20700 586 aa11.97□□□□□ -0.49
TPM3-212ENST00000368533 ATP2C1P98194 919 aaPredicted RBP11.97□□□□□ -0.49
TPM3-212ENST00000368533 SYDE2Q5VT97 1194 aa11.97□□□□□ -0.49
TPM3-212ENST00000368533 ERO1AQ96HE7 468 aa11.97□□□□□ -0.49
TPM3-212ENST00000368533 ZBED3Q96IU2 234 aaPredicted RBP11.97□□□□□ -0.49
TPM3-212ENST00000368533 P2RX7Q99572 595 aaKnown RBP11.97□□□□□ -0.49
TPM3-212ENST00000368533 TSPYL1Q9H0U9 437 aa11.97□□□□□ -0.49
TPM3-212ENST00000368533 IMPACTQ9P2X3 320 aa11.97□□□□□ -0.49
TPM3-212ENST00000368533 CFBP00751 764 aa11.97□□□□□ -0.49
TPM3-212ENST00000368533 MTMR2Q13614 643 aa11.97□□□□□ -0.49
TPM3-212ENST00000368533 KLHL10Q6JEL2 608 aa11.97□□□□□ -0.49
TPM3-212ENST00000368533 CCDC12Q8WUD4 166 aaPredicted RBP11.97□□□□□ -0.49
TPM3-212ENST00000368533 DPF2Q92785 391 aa11.97□□□□□ -0.49
TPM3-212ENST00000368533 DRC1Q96MC2 740 aa11.97□□□□□ -0.49
TPM3-212ENST00000368533 SH3GLB2Q9NR46 395 aa11.97□□□□□ -0.49
TPM3-212ENST00000368533 ADM5C9JUS6 153 aa11.96□□□□□ -0.49
TPM3-212ENST00000368533 MARCH6O60337 910 aa11.96□□□□□ -0.49
TPM3-212ENST00000368533 SPP2Q13103 211 aa11.96□□□□□ -0.49
TPM3-212ENST00000368533 NCAPHQ15003 741 aa11.96□□□□□ -0.49
TPM3-212ENST00000368533 ZSCAN26Q16670 478 aa11.96□□□□□ -0.49
TPM3-212ENST00000368533 C9orf131Q5VYM1 1079 aa11.96□□□□□ -0.49
TPM3-212ENST00000368533 NEK8Q86SG6 692 aa11.96□□□□□ -0.49
TPM3-212ENST00000368533 TRMT44Q8IYL2 757 aaKnown RBP11.96□□□□□ -0.49
TPM3-212ENST00000368533 TANGO6Q9C0B7 1094 aa11.96□□□□□ -0.49
TPM3-212ENST00000368533 GPRC5DQ9NZD1 345 aa11.96□□□□□ -0.49
TPM3-212ENST00000368533 MAPK8IP1Q9UQF2 711 aa11.96□□□□□ -0.49
TPM3-212ENST00000368533 PSME4Q14997 1843 aa11.96□□□□□ -0.49
TPM3-212ENST00000368533 POTEMA6NI47 508 aa11.96□□□□□ -0.5
TPM3-212ENST00000368533 STAT2P52630 851 aa11.96□□□□□ -0.5
TPM3-212ENST00000368533 ZNF280AP59817 542 aaPredicted RBP11.96□□□□□ -0.5
TPM3-212ENST00000368533 GPR162Q16538 588 aa11.96□□□□□ -0.5
TPM3-212ENST00000368533 MOB2Q70IA6 237 aa11.96□□□□□ -0.5
TPM3-212ENST00000368533 MKL1Q969V6 931 aa11.96□□□□□ -0.5
TPM3-212ENST00000368533 CBFA2T2O43439 604 aa11.95□□□□□ -0.5
TPM3-212ENST00000368533 DTHD1Q6ZMT9 781 aa11.95□□□□□ -0.5
TPM3-212ENST00000368533 FAM83AQ86UY5 434 aa11.95□□□□□ -0.5
TPM3-212ENST00000368533 FBXO11Q86XK2 927 aa11.95□□□□□ -0.5
TPM3-212ENST00000368533 DCAF4Q8WV16 495 aa11.95□□□□□ -0.5
TPM3-212ENST00000368533 CNKSR2Q8WXI2 1034 aa11.95□□□□□ -0.5
TPM3-212ENST00000368533 CUL5Q93034 780 aa11.95□□□□□ -0.5
TPM3-212ENST00000368533 BPIFA3Q9BQP9 254 aa11.95□□□□□ -0.5
TPM3-212ENST00000368533 VPS33BQ9H267 617 aa11.95□□□□□ -0.5
TPM3-212ENST00000368533 PGAP2Q9UHJ9 254 aa11.95□□□□□ -0.5
TPM3-212ENST00000368533 PHF20L1A8MW92 1017 aa11.95□□□□□ -0.5
TPM3-212ENST00000368533 E2F4Q16254 413 aa11.95□□□□□ -0.5
TPM3-212ENST00000368533 E4F1Q66K89 784 aaPredicted RBP11.95□□□□□ -0.5
TPM3-212ENST00000368533 CREBRFQ8IUR6 639 aa11.95□□□□□ -0.5
TPM3-212ENST00000368533 C4orf32Q8N8J7 132 aa11.95□□□□□ -0.5
TPM3-212ENST00000368533 EDIL3O43854 480 aa11.95□□□□□ -0.5
TPM3-212ENST00000368533 STX17P56962 302 aa11.95□□□□□ -0.5
TPM3-212ENST00000368533 TNFAIP1Q13829 316 aa11.95□□□□□ -0.5
TPM3-212ENST00000368533 POSTNQ15063 836 aa11.95□□□□□ -0.5
TPM3-212ENST00000368533 EAPPQ56P03 285 aaPredicted RBP11.95□□□□□ -0.5
TPM3-212ENST00000368533 KRT25Q7Z3Z0 450 aa11.95□□□□□ -0.5
TPM3-212ENST00000368533 MTMR14Q8NCE2 650 aa11.95□□□□□ -0.5
TPM3-212ENST00000368533 PPP1R13BQ96KQ4 1090 aa11.95□□□□□ -0.5
TPM3-212ENST00000368533 AGBL1Q96MI9 1066 aa11.95□□□□□ -0.5
TPM3-212ENST00000368533 EFCC1Q9HA90 598 aa11.95□□□□□ -0.5
TPM3-212ENST00000368533 IKBKBO14920 756 aa11.94□□□□□ -0.5
TPM3-212ENST00000368533 ASNSP08243 561 aa11.94□□□□□ -0.5
TPM3-212ENST00000368533 BMP6P22004 513 aa11.94□□□□□ -0.5
TPM3-212ENST00000368533 NYAP1Q6ZVC0 841 aa11.94□□□□□ -0.5
TPM3-212ENST00000368533 TRMT1LQ7Z2T5 733 aaKnown RBP11.94□□□□□ -0.5
TPM3-212ENST00000368533 CYP2W1Q8TAV3 490 aa11.94□□□□□ -0.5
TPM3-212ENST00000368533 WNK4Q96J92 1243 aa11.94□□□□□ -0.5
TPM3-212ENST00000368533 GOPCQ9HD26 462 aa11.94□□□□□ -0.5
TPM3-212ENST00000368533 DNAI1Q9UI46 699 aa11.94□□□□□ -0.5
TPM3-212ENST00000368533 TMX2Q9Y320 296 aa11.94□□□□□ -0.5
TPM3-212ENST00000368533 ACTN4O43707 911 aaKnown RBP11.94□□□□□ -0.5
TPM3-212ENST00000368533 H2AFXP16104 143 aaPredicted RBP11.94□□□□□ -0.5
TPM3-212ENST00000368533 RPS12P25398 132 aaKnown RBP11.94□□□□□ -0.5
TPM3-212ENST00000368533 FMR1Q06787 632 aaKnown RBP eCLIP11.94□□□□□ -0.5
TPM3-212ENST00000368533 LRRC15Q8TF66 581 aa11.94□□□□□ -0.5
TPM3-212ENST00000368533 EEF2KMTQ96G04 330 aa11.94□□□□□ -0.5
TPM3-212ENST00000368533 VCPKMTQ9H867 229 aa11.94□□□□□ -0.5
TPM3-212ENST00000368533 PKD2L1Q9P0L9 805 aa11.94□□□□□ -0.5
TPM3-212ENST00000368533 TUBE1Q9UJT0 475 aa11.94□□□□□ -0.5
TPM3-212ENST00000368533 ZHX2Q9Y6X8 837 aa11.94□□□□□ -0.5
TPM3-212ENST00000368533 CASQ1P31415 396 aa11.93□□□□□ -0.5
TPM3-212ENST00000368533 UBA7P41226 1012 aa11.93□□□□□ -0.5
TPM3-212ENST00000368533 SKIDA1Q1XH10 827 aa11.93□□□□□ -0.5
TPM3-212ENST00000368533 AMNQ9BXJ7 453 aa11.93□□□□□ -0.5
TPM3-212ENST00000368533 KIF2AO00139 706 aaPredicted RBP11.93□□□□□ -0.5
TPM3-212ENST00000368533 FLOT1O75955 427 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms