RNA–Protein interactions for RNA: ENST00000368289.6

ECHDC1-202, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5 BASIC

Gene ECHDC1, Length 909 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-202ENST00000368289 LNPKQ9C0E8 428 aa7.78□□□□□ -1.16
ECHDC1-202ENST00000368289 SLKQ9H2G2 1235 aaPredicted RBP7.78□□□□□ -1.16
ECHDC1-202ENST00000368289 C11orf49Q9H6J7 331 aa7.78□□□□□ -1.16
ECHDC1-202ENST00000368289 THEGQ9P2T0 379 aa7.78□□□□□ -1.16
ECHDC1-202ENST00000368289 ASPMQ8IZT6 3477 aa7.78□□□□□ -1.16
ECHDC1-202ENST00000368289 GVINP1Q7Z2Y8 2422 aa7.77□□□□□ -1.17
ECHDC1-202ENST00000368289 FSD2A1L4K1 749 aa7.77□□□□□ -1.17
ECHDC1-202ENST00000368289 ANKRD33BA6NCL7 494 aa7.77□□□□□ -1.17
ECHDC1-202ENST00000368289 GOLGA6L3A6NEY3 463 aa7.77□□□□□ -1.17
ECHDC1-202ENST00000368289 GNAT3A8MTJ3 354 aa7.77□□□□□ -1.17
ECHDC1-202ENST00000368289 GPR182O15218 404 aa7.77□□□□□ -1.17
ECHDC1-202ENST00000368289 GHRHP01286 108 aa7.77□□□□□ -1.17
ECHDC1-202ENST00000368289 GTF2A2P52657 109 aa7.77□□□□□ -1.17
ECHDC1-202ENST00000368289 TFF2Q03403 129 aa7.77□□□□□ -1.17
ECHDC1-202ENST00000368289 VGLL4Q14135 290 aa7.77□□□□□ -1.17
ECHDC1-202ENST00000368289 KANK3Q6NY19 840 aa7.77□□□□□ -1.17
ECHDC1-202ENST00000368289 LYPD4Q6UWN0 246 aa7.77□□□□□ -1.17
ECHDC1-202ENST00000368289 TMC4Q7Z404 712 aa7.77□□□□□ -1.17
ECHDC1-202ENST00000368289 PPP1R42Q7Z4L9 355 aa7.77□□□□□ -1.17
ECHDC1-202ENST00000368289 NLRP10Q86W26 655 aa7.77□□□□□ -1.17
ECHDC1-202ENST00000368289 SVOPQ8N4V2 548 aa7.77□□□□□ -1.17
ECHDC1-202ENST00000368289 C1orf127Q8N9H9 656 aa7.77□□□□□ -1.17
ECHDC1-202ENST00000368289 EYA3Q99504 573 aa7.77□□□□□ -1.17
ECHDC1-202ENST00000368289 SRCIN1Q9C0H9 1055 aa7.77□□□□□ -1.17
ECHDC1-202ENST00000368289 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.77□□□□□ -1.17
ECHDC1-202ENST00000368289 HDAC5Q9UQL6 1122 aa7.77□□□□□ -1.17
ECHDC1-202ENST00000368289 DOCK3Q8IZD9 2030 aa7.77□□□□□ -1.17
ECHDC1-202ENST00000368289 DDX60LQ5H9U9 1706 aaKnown RBP7.77□□□□□ -1.17
ECHDC1-202ENST00000368289 FLNBO75369 2602 aaKnown RBP7.76□□□□□ -1.17
ECHDC1-202ENST00000368289 UFL1O94874 794 aa7.76□□□□□ -1.17
ECHDC1-202ENST00000368289 IGHA2P01877 340 aa7.76□□□□□ -1.17
ECHDC1-202ENST00000368289 GNAI3P08754 354 aa7.76□□□□□ -1.17
ECHDC1-202ENST00000368289 KCNQ1P51787 676 aa7.76□□□□□ -1.17
ECHDC1-202ENST00000368289 DSC3Q14574 896 aa7.76□□□□□ -1.17
ECHDC1-202ENST00000368289 RAB3GAP1Q15042 981 aa7.76□□□□□ -1.17
ECHDC1-202ENST00000368289 PARP10Q53GL7 1025 aa7.76□□□□□ -1.17
ECHDC1-202ENST00000368289 TTC22Q5TAA0 569 aa7.76□□□□□ -1.17
ECHDC1-202ENST00000368289 NCAPG2Q86XI2 1143 aa7.76□□□□□ -1.17
ECHDC1-202ENST00000368289 TSPYL6Q8N831 410 aa7.76□□□□□ -1.17
ECHDC1-202ENST00000368289 C8orf58Q8NAV2 365 aa7.76□□□□□ -1.17
ECHDC1-202ENST00000368289 FBXL18Q96ME1 805 aa7.76□□□□□ -1.17
ECHDC1-202ENST00000368289 TEPSINQ96N21 525 aa7.76□□□□□ -1.17
ECHDC1-202ENST00000368289 CD320Q9NPF0 282 aa7.76□□□□□ -1.17
ECHDC1-202ENST00000368289 CNTN3Q9P232 1028 aa7.76□□□□□ -1.17
ECHDC1-202ENST00000368289 FOXD3Q9UJU5 478 aaPredicted RBP7.76□□□□□ -1.17
ECHDC1-202ENST00000368289 OGDHLQ9ULD0 1010 aa7.76□□□□□ -1.17
ECHDC1-202ENST00000368289 SLC6A14Q9UN76 642 aa7.76□□□□□ -1.17
ECHDC1-202ENST00000368289 ZNF804BA4D1E1 1349 aa7.76□□□□□ -1.17
ECHDC1-202ENST00000368289 BRWD1Q9NSI6 2320 aa7.75□□□□□ -1.17
ECHDC1-202ENST00000368289 COL1A1P02452 1464 aaPredicted RBP7.75□□□□□ -1.17
ECHDC1-202ENST00000368289 SMIM22K7EJ46 135 aa7.75□□□□□ -1.17
ECHDC1-202ENST00000368289 HSP90AA1P07900 732 aaKnown RBP7.75□□□□□ -1.17
ECHDC1-202ENST00000368289 HOXB7P09629 217 aa7.75□□□□□ -1.17
ECHDC1-202ENST00000368289 EDN3P14138 238 aa7.75□□□□□ -1.17
ECHDC1-202ENST00000368289 MYL6BP14649 208 aa7.75□□□□□ -1.17
ECHDC1-202ENST00000368289 AMPD1P23109 780 aa7.75□□□□□ -1.17
ECHDC1-202ENST00000368289 HOXD10P28358 340 aa7.75□□□□□ -1.17
ECHDC1-202ENST00000368289 IREB2P48200 963 aaKnown RBP7.75□□□□□ -1.17
ECHDC1-202ENST00000368289 ATP2B2Q01814 1243 aa7.75□□□□□ -1.17
ECHDC1-202ENST00000368289 SF3B3Q15393 1217 aaKnown RBP7.75□□□□□ -1.17
ECHDC1-202ENST00000368289 CCDC30Q5VVM6 783 aa7.75□□□□□ -1.17
ECHDC1-202ENST00000368289 DNAJC14Q6Y2X3 702 aaPredicted RBP7.75□□□□□ -1.17
ECHDC1-202ENST00000368289 FAM35AQ86V20 835 aa7.75□□□□□ -1.17
ECHDC1-202ENST00000368289 SIRT2Q8IXJ6 389 aa7.75□□□□□ -1.17
ECHDC1-202ENST00000368289 ZSCAN1Q8NBB4 408 aa7.75□□□□□ -1.17
ECHDC1-202ENST00000368289 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.75□□□□□ -1.17
ECHDC1-202ENST00000368289 NEDD1Q8NHV4 660 aa7.75□□□□□ -1.17
ECHDC1-202ENST00000368289 IL17RAQ96F46 866 aa7.75□□□□□ -1.17
ECHDC1-202ENST00000368289 MDFIQ99750 246 aa7.75□□□□□ -1.17
ECHDC1-202ENST00000368289 STK31Q9BXU1 1019 aa7.75□□□□□ -1.17
ECHDC1-202ENST00000368289 ZCCHC17Q9NP64 241 aaKnown RBP7.75□□□□□ -1.17
ECHDC1-202ENST00000368289 MIS18AQ9NYP9 233 aa7.75□□□□□ -1.17
ECHDC1-202ENST00000368289 SNCAIPQ9Y6H5 919 aa7.75□□□□□ -1.17
ECHDC1-202ENST00000368289 MAST4O15021 2626 aa7.74□□□□□ -1.17
ECHDC1-202ENST00000368289 CLRN2A0PK11 232 aa7.74□□□□□ -1.17
ECHDC1-202ENST00000368289 ZBTB42B2RXF5 422 aa7.74□□□□□ -1.17
ECHDC1-202ENST00000368289 EIF1AYO14602 144 aaKnown RBP7.74□□□□□ -1.17
ECHDC1-202ENST00000368289 KIF4AO95239 1232 aa7.74□□□□□ -1.17
ECHDC1-202ENST00000368289 CAPN2P17655 700 aa7.74□□□□□ -1.17
ECHDC1-202ENST00000368289 MAPK8P45983 427 aa7.74□□□□□ -1.17
ECHDC1-202ENST00000368289 EPHB4P54760 987 aa7.74□□□□□ -1.17
ECHDC1-202ENST00000368289 ANAPC15P60006 121 aa7.74□□□□□ -1.17
ECHDC1-202ENST00000368289 ZNF385CQ66K41 422 aaPredicted RBP7.74□□□□□ -1.17
ECHDC1-202ENST00000368289 CEP85Q6P2H3 762 aa7.74□□□□□ -1.17
ECHDC1-202ENST00000368289 TXNRD3Q86VQ6 643 aa7.74□□□□□ -1.17
ECHDC1-202ENST00000368289 KIAA0825Q8IV33 1275 aa7.74□□□□□ -1.17
ECHDC1-202ENST00000368289 MICALL1Q8N3F8 863 aa7.74□□□□□ -1.17
ECHDC1-202ENST00000368289 BTBD6Q96KE9 485 aa7.74□□□□□ -1.17
ECHDC1-202ENST00000368289 NSUN5Q96P11 429 aaKnown RBP7.74□□□□□ -1.17
ECHDC1-202ENST00000368289 THUMPD2Q9BTF0 503 aaKnown RBP7.74□□□□□ -1.17
ECHDC1-202ENST00000368289 CHRDQ9H2X0 955 aa7.74□□□□□ -1.17
ECHDC1-202ENST00000368289 SEC31BQ9NQW1 1179 aa7.74□□□□□ -1.17
ECHDC1-202ENST00000368289 FRRS1LQ9P0K9 344 aa7.74□□□□□ -1.17
ECHDC1-202ENST00000368289 SALL4Q9UJQ4 1053 aa7.74□□□□□ -1.17
ECHDC1-202ENST00000368289 USP24Q9UPU5 2620 aa7.73□□□□□ -1.17
ECHDC1-202ENST00000368289 GPR179Q6PRD1 2367 aa7.73□□□□□ -1.17
ECHDC1-202ENST00000368289 FAM181BA6NEQ2 426 aa7.73□□□□□ -1.17
ECHDC1-202ENST00000368289 EREGO14944 169 aa7.73□□□□□ -1.17
ECHDC1-202ENST00000368289 GNAI2P04899 355 aa7.73□□□□□ -1.17
ECHDC1-202ENST00000368289 CYP2E1P05181 493 aaPredicted RBP7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms