RNA–Protein interactions for RNA: ENST00000367818.3

XCL1-201, Transcript of X-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XCL1, Length 1,367 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XCL1-201ENST00000367818 C12orf49Q9H741 205 aa5.9□□□□□ -1.47
XCL1-201ENST00000367818 ARHGAP31Q2M1Z3 1444 aa5.89□□□□□ -1.47
XCL1-201ENST00000367818 TMEM94Q12767 1356 aa5.89□□□□□ -1.47
XCL1-201ENST00000367818 XIRP1Q702N8 1843 aaKnown RBP5.89□□□□□ -1.47
XCL1-201ENST00000367818 A0A1W2PQ45 241 aaPredicted RBP5.89□□□□□ -1.47
XCL1-201ENST00000367818 A0A1W2PQY0 241 aa5.89□□□□□ -1.47
XCL1-201ENST00000367818 TREHO43280 583 aa5.89□□□□□ -1.47
XCL1-201ENST00000367818 ATF2P15336 505 aa5.89□□□□□ -1.47
XCL1-201ENST00000367818 KLF10Q13118 480 aa5.89□□□□□ -1.47
XCL1-201ENST00000367818 CDSNQ15517 529 aa5.89□□□□□ -1.47
XCL1-201ENST00000367818 TSNAXIP1Q2TAA8 658 aa5.89□□□□□ -1.47
XCL1-201ENST00000367818 ZNF326Q5BKZ1 582 aaKnown RBP5.89□□□□□ -1.47
XCL1-201ENST00000367818 AGMOQ6ZNB7 445 aa5.89□□□□□ -1.47
XCL1-201ENST00000367818 RETREG2Q8NC44 543 aa5.89□□□□□ -1.47
XCL1-201ENST00000367818 RNF38Q9H0F5 515 aa5.89□□□□□ -1.47
XCL1-201ENST00000367818 ST6GALNAC2Q9UJ37 374 aa5.89□□□□□ -1.47
XCL1-201ENST00000367818 ALKQ9UM73 1620 aa5.89□□□□□ -1.47
XCL1-201ENST00000367818 ARHGAP23Q9P227 1491 aa5.88□□□□□ -1.47
XCL1-201ENST00000367818 GCC2Q8IWJ2 1684 aa5.88□□□□□ -1.47
XCL1-201ENST00000367818 KCNA6P17658 529 aa5.88□□□□□ -1.47
XCL1-201ENST00000367818 CCDC74BQ96LY2 380 aa5.88□□□□□ -1.47
XCL1-201ENST00000367818 YTHDC1Q96MU7 727 aaKnown RBP5.88□□□□□ -1.47
XCL1-201ENST00000367818 SLC52A1Q9NWF4 448 aa5.88□□□□□ -1.47
XCL1-201ENST00000367818 ERVK13-1Q9NX77 482 aa5.88□□□□□ -1.47
XCL1-201ENST00000367818 IMPACTQ9P2X3 320 aa5.88□□□□□ -1.47
XCL1-201ENST00000367818 MED1Q15648 1581 aaPredicted RBP5.88□□□□□ -1.47
XCL1-201ENST00000367818 SLIT1O75093 1534 aa5.88□□□□□ -1.47
XCL1-201ENST00000367818 ADGRL2O95490 1459 aa5.88□□□□□ -1.47
XCL1-201ENST00000367818 NOS1P29475 1434 aa5.87□□□□□ -1.47
XCL1-201ENST00000367818 RIMS2Q9UQ26 1411 aa5.87□□□□□ -1.47
XCL1-201ENST00000367818 ENDOUP21128 410 aaKnown RBP5.87□□□□□ -1.47
XCL1-201ENST00000367818 ZNF761Q86XN6 746 aaPredicted RBP5.87□□□□□ -1.47
XCL1-201ENST00000367818 SPG7Q9UQ90 795 aa5.87□□□□□ -1.47
XCL1-201ENST00000367818 E9PCH4 1651 aa5.87□□□□□ -1.47
XCL1-201ENST00000367818 ADGRB3O60242 1522 aa5.86□□□□□ -1.47
XCL1-201ENST00000367818 LMTK2Q8IWU2 1503 aa5.86□□□□□ -1.47
XCL1-201ENST00000367818 CHMP4BP1P59074 171 aa5.86□□□□□ -1.47
XCL1-201ENST00000367818 RNF4P78317 190 aa5.86□□□□□ -1.47
XCL1-201ENST00000367818 TMC3Q7Z5M5 1100 aa5.86□□□□□ -1.47
XCL1-201ENST00000367818 SSBP3Q9BWW4 388 aaPredicted RBP5.86□□□□□ -1.47
XCL1-201ENST00000367818 NTMQ9P121 344 aa5.86□□□□□ -1.47
XCL1-201ENST00000367818 ING1Q9UK53 422 aaPredicted RBP5.86□□□□□ -1.47
XCL1-201ENST00000367818 PLA2G2DQ9UNK4 145 aa5.86□□□□□ -1.47
XCL1-201ENST00000367818 TET3O43151 1660 aa5.86□□□□□ -1.47
XCL1-201ENST00000367818 SARSP49591 514 aaKnown RBP5.85□□□□□ -1.47
XCL1-201ENST00000367818 LIG3P49916 1009 aa5.85□□□□□ -1.47
XCL1-201ENST00000367818 CCDC85BQ15834 202 aaPredicted RBP5.85□□□□□ -1.47
XCL1-201ENST00000367818 DCTN4Q9UJW0 460 aa5.85□□□□□ -1.47
XCL1-201ENST00000367818 SUPT16HQ9Y5B9 1047 aaKnown RBP5.85□□□□□ -1.47
XCL1-201ENST00000367818 HS3ST3A1Q9Y663 406 aa5.85□□□□□ -1.47
XCL1-201ENST00000367818 TMEM131LA2VDJ0 1609 aa5.84□□□□□ -1.47
XCL1-201ENST00000367818 SRGAP3O43295 1099 aa5.84□□□□□ -1.47
XCL1-201ENST00000367818 CYBBP04839 570 aa5.84□□□□□ -1.47
XCL1-201ENST00000367818 ALG1LQ6GMV1 187 aa5.84□□□□□ -1.47
XCL1-201ENST00000367818 PAQR3Q6TCH7 311 aa5.84□□□□□ -1.47
XCL1-201ENST00000367818 PHACTR4Q8IZ21 702 aa5.84□□□□□ -1.47
XCL1-201ENST00000367818 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.84□□□□□ -1.47
XCL1-201ENST00000367818 CDK5RAP1Q96SZ6 601 aaKnown RBP5.84□□□□□ -1.47
XCL1-201ENST00000367818 SETDB2Q96T68 719 aa5.84□□□□□ -1.47
XCL1-201ENST00000367818 C11orf21Q9P2W6 132 aa5.84□□□□□ -1.47
XCL1-201ENST00000367818 KLHL3Q9UH77 587 aa5.84□□□□□ -1.47
XCL1-201ENST00000367818 HCFC2Q9Y5Z7 792 aa5.84□□□□□ -1.47
XCL1-201ENST00000367818 UNC13BO14795 1591 aa5.84□□□□□ -1.47
XCL1-201ENST00000367818 MSH6P52701 1360 aa5.84□□□□□ -1.47
XCL1-201ENST00000367818 PLEKHG1Q9ULL1 1385 aa5.84□□□□□ -1.47
XCL1-201ENST00000367818 ZFYVE9O95405 1425 aa5.83□□□□□ -1.48
XCL1-201ENST00000367818 PRAMEF1O95521 474 aa5.83□□□□□ -1.48
XCL1-201ENST00000367818 DBHP09172 617 aa5.83□□□□□ -1.48
XCL1-201ENST00000367818 TFE3P19532 575 aaPredicted RBP5.83□□□□□ -1.48
XCL1-201ENST00000367818 MC3RP41968 323 aa5.83□□□□□ -1.48
XCL1-201ENST00000367818 SMN1Q16637 294 aaKnown RBP5.83□□□□□ -1.48
XCL1-201ENST00000367818 B3GNT8Q7Z7M8 397 aa5.83□□□□□ -1.48
XCL1-201ENST00000367818 DDX17Q92841 729 aaKnown RBP5.83□□□□□ -1.48
XCL1-201ENST00000367818 RGS17Q9UGC6 210 aaPredicted RBP5.83□□□□□ -1.48
XCL1-201ENST00000367818 USTQ9Y2C2 406 aa5.83□□□□□ -1.48
XCL1-201ENST00000367818 ROBO1Q9Y6N7 1651 aa5.83□□□□□ -1.48
XCL1-201ENST00000367818 ROCK1Q13464 1354 aa5.83□□□□□ -1.48
XCL1-201ENST00000367818 RPRD2Q5VT52 1461 aaKnown RBP5.83□□□□□ -1.48
XCL1-201ENST00000367818 CHD2O14647 1828 aaKnown RBP5.82□□□□□ -1.48
XCL1-201ENST00000367818 NCAM1P13591 858 aa5.82□□□□□ -1.48
XCL1-201ENST00000367818 ATF3P18847 181 aa5.82□□□□□ -1.48
XCL1-201ENST00000367818 RGL3Q3MIN7 710 aa5.82□□□□□ -1.48
XCL1-201ENST00000367818 MEX3CQ5U5Q3 659 aaKnown RBP5.82□□□□□ -1.48
XCL1-201ENST00000367818 GLB1LQ6UWU2 654 aa5.82□□□□□ -1.48
XCL1-201ENST00000367818 ZNF575Q86XF7 245 aa5.82□□□□□ -1.48
XCL1-201ENST00000367818 JMJD8Q96S16 334 aa5.82□□□□□ -1.48
XCL1-201ENST00000367818 CDADC1Q9BWV3 514 aa5.82□□□□□ -1.48
XCL1-201ENST00000367818 TBX22Q9Y458 520 aa5.82□□□□□ -1.48
XCL1-201ENST00000367818 IQGAP3Q86VI3 1631 aa5.82□□□□□ -1.48
XCL1-201ENST00000367818 PHLPP1O60346 1717 aa5.82□□□□□ -1.48
XCL1-201ENST00000367818 ADAMTS13Q76LX8 1427 aa5.82□□□□□ -1.48
XCL1-201ENST00000367818 PTPRUQ92729 1446 aa5.82□□□□□ -1.48
XCL1-201ENST00000367818 CHURC1-FNTBB4DL54 471 aa5.81□□□□□ -1.48
XCL1-201ENST00000367818 AMHP03971 560 aa5.81□□□□□ -1.48
XCL1-201ENST00000367818 MAPK8P45983 427 aa5.81□□□□□ -1.48
XCL1-201ENST00000367818 MVKQ03426 396 aa5.81□□□□□ -1.48
XCL1-201ENST00000367818 SNW1Q13573 536 aaKnown RBP5.81□□□□□ -1.48
XCL1-201ENST00000367818 MAP3K11Q16584 847 aa5.81□□□□□ -1.48
XCL1-201ENST00000367818 ADAMTS17Q8TE56 1095 aa5.81□□□□□ -1.48
XCL1-201ENST00000367818 KIF2CQ99661 725 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms