RNA–Protein interactions for RNA: ENST00000367427.7

CFHR3-202, Transcript of complement factor H related 3, humanhuman

TSL 5

Gene CFHR3, Length 1,242 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFHR3-202ENST00000367427 NRDCO43847 1150 aa9.46□□□□□ -0.9
CFHR3-202ENST00000367427 CLEC3AO75596 197 aa9.46□□□□□ -0.9
CFHR3-202ENST00000367427 UBOX5O94941 541 aa9.46□□□□□ -0.9
CFHR3-202ENST00000367427 EPHX1P07099 455 aa9.46□□□□□ -0.9
CFHR3-202ENST00000367427 POU3F3P20264 500 aaPredicted RBP9.46□□□□□ -0.9
CFHR3-202ENST00000367427 PPP2R2AP63151 447 aa9.46□□□□□ -0.9
CFHR3-202ENST00000367427 EXOSC10Q01780 885 aaKnown RBP9.46□□□□□ -0.9
CFHR3-202ENST00000367427 RNF111Q6ZNA4 994 aa9.46□□□□□ -0.9
CFHR3-202ENST00000367427 SYTL5Q8TDW5 730 aaPredicted RBP9.46□□□□□ -0.9
CFHR3-202ENST00000367427 HDAC8Q9BY41 377 aa9.46□□□□□ -0.9
CFHR3-202ENST00000367427 MRPL4Q9BYD3 311 aaKnown RBP9.46□□□□□ -0.9
CFHR3-202ENST00000367427 CNTD2Q9H8S5 307 aa9.46□□□□□ -0.9
CFHR3-202ENST00000367427 MAPRE3Q9UPY8 281 aa9.46□□□□□ -0.9
CFHR3-202ENST00000367427 SUGT1Q9Y2Z0 365 aa9.46□□□□□ -0.9
CFHR3-202ENST00000367427 ALG1L2C9J202 215 aa9.45□□□□□ -0.9
CFHR3-202ENST00000367427 KIR2DL1P43626 348 aaPredicted RBP9.45□□□□□ -0.9
CFHR3-202ENST00000367427 KIR2DL2P43627 348 aaPredicted RBP9.45□□□□□ -0.9
CFHR3-202ENST00000367427 YBX1P67809 324 aaKnown RBP9.45□□□□□ -0.9
CFHR3-202ENST00000367427 ADGRF1Q5T601 910 aa9.45□□□□□ -0.9
CFHR3-202ENST00000367427 YOD1Q5VVQ6 348 aaPredicted RBP9.45□□□□□ -0.9
CFHR3-202ENST00000367427 UBR7Q8N806 425 aa9.45□□□□□ -0.9
CFHR3-202ENST00000367427 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.45□□□□□ -0.9
CFHR3-202ENST00000367427 TMEM82A0PJX8 343 aa9.44□□□□□ -0.9
CFHR3-202ENST00000367427 OTOL1A6NHN0 477 aaPredicted RBP9.44□□□□□ -0.9
CFHR3-202ENST00000367427 GSG1L2A8MUP6 293 aa9.44□□□□□ -0.9
CFHR3-202ENST00000367427 C9IYK1 514 aa9.44□□□□□ -0.9
CFHR3-202ENST00000367427 USP2O75604 605 aaPredicted RBP9.44□□□□□ -0.9
CFHR3-202ENST00000367427 ITGAVP06756 1048 aa9.44□□□□□ -0.9
CFHR3-202ENST00000367427 EPHB3P54753 998 aa9.44□□□□□ -0.9
CFHR3-202ENST00000367427 CLEC16AQ2KHT3 1053 aa9.44□□□□□ -0.9
CFHR3-202ENST00000367427 SKOR2Q2VWA4 1001 aaPredicted RBP9.44□□□□□ -0.9
CFHR3-202ENST00000367427 BRDTQ58F21 947 aaPredicted RBP9.44□□□□□ -0.9
CFHR3-202ENST00000367427 RNF180Q86T96 592 aa9.44□□□□□ -0.9
CFHR3-202ENST00000367427 FMNL3Q8IVF7 1028 aa9.44□□□□□ -0.9
CFHR3-202ENST00000367427 CCDC144CPQ8IYA2 1237 aa9.44□□□□□ -0.9
CFHR3-202ENST00000367427 MAP6Q96JE9 813 aa9.44□□□□□ -0.9
CFHR3-202ENST00000367427 FGD4Q96M96 766 aa9.44□□□□□ -0.9
CFHR3-202ENST00000367427 CLUHP3Q96NS8 147 aa9.44□□□□□ -0.9
CFHR3-202ENST00000367427 IRAK3Q9Y616 596 aa9.44□□□□□ -0.9
CFHR3-202ENST00000367427 N4BP3O15049 544 aa9.43□□□□□ -0.9
CFHR3-202ENST00000367427 PMLP29590 882 aa9.43□□□□□ -0.9
CFHR3-202ENST00000367427 VIPR1P32241 457 aa9.43□□□□□ -0.9
CFHR3-202ENST00000367427 SUMO1P63165 101 aaKnown RBP9.43□□□□□ -0.9
CFHR3-202ENST00000367427 NMIQ13287 307 aaPredicted RBP9.43□□□□□ -0.9
CFHR3-202ENST00000367427 AXDND1Q5T1B0 1012 aaPredicted RBP9.43□□□□□ -0.9
CFHR3-202ENST00000367427 WWC2Q6AWC2 1192 aa9.43□□□□□ -0.9
CFHR3-202ENST00000367427 ADAT2Q7Z6V5 191 aaKnown RBP9.43□□□□□ -0.9
CFHR3-202ENST00000367427 ZNF227Q86WZ6 799 aa9.43□□□□□ -0.9
CFHR3-202ENST00000367427 DAGLBQ8NCG7 672 aa9.43□□□□□ -0.9
CFHR3-202ENST00000367427 KLHL25Q9H0H3 589 aa9.43□□□□□ -0.9
CFHR3-202ENST00000367427 GBP3Q9H0R5 595 aa9.43□□□□□ -0.9
CFHR3-202ENST00000367427 INTS7Q9NVH2 962 aaKnown RBP9.43□□□□□ -0.9
CFHR3-202ENST00000367427 MAGEC2Q9UBF1 373 aaPredicted RBP9.43□□□□□ -0.9
CFHR3-202ENST00000367427 FGFR1P11362 822 aa9.42□□□□□ -0.9
CFHR3-202ENST00000367427 RPL10P27635 214 aaKnown RBP9.42□□□□□ -0.9
CFHR3-202ENST00000367427 CNNM4Q6P4Q7 775 aa9.42□□□□□ -0.9
CFHR3-202ENST00000367427 NSMFQ6X4W1 530 aa9.42□□□□□ -0.9
CFHR3-202ENST00000367427 DBX2Q6ZNG2 339 aa9.42□□□□□ -0.9
CFHR3-202ENST00000367427 LRRTM3Q86VH5 581 aa9.42□□□□□ -0.9
CFHR3-202ENST00000367427 ATL2Q8NHH9 583 aa9.42□□□□□ -0.9
CFHR3-202ENST00000367427 HHIPL1Q96JK4 782 aa9.42□□□□□ -0.9
CFHR3-202ENST00000367427 TARS2Q9BW92 718 aaKnown RBP9.42□□□□□ -0.9
CFHR3-202ENST00000367427 SIRT5Q9NXA8 310 aa9.42□□□□□ -0.9
CFHR3-202ENST00000367427 APEX2Q9UBZ4 518 aa9.42□□□□□ -0.9
CFHR3-202ENST00000367427 TCEAL9Q9UHQ7 104 aa9.42□□□□□ -0.9
CFHR3-202ENST00000367427 PRODHO43272 600 aa9.41□□□□□ -0.9
CFHR3-202ENST00000367427 CBFA2T2O43439 604 aa9.41□□□□□ -0.9
CFHR3-202ENST00000367427 PPM1BO75688 479 aa9.41□□□□□ -0.9
CFHR3-202ENST00000367427 PABPC1P11940 636 aaKnown RBP9.41□□□□□ -0.9
CFHR3-202ENST00000367427 PNLIPP16233 465 aa9.41□□□□□ -0.9
CFHR3-202ENST00000367427 CPEP16870 476 aa9.41□□□□□ -0.9
CFHR3-202ENST00000367427 AFF3P51826 1226 aaKnown RBP9.41□□□□□ -0.9
CFHR3-202ENST00000367427 FAM50AQ14320 339 aaKnown RBP9.41□□□□□ -0.9
CFHR3-202ENST00000367427 DCAF15Q66K64 600 aa9.41□□□□□ -0.9
CFHR3-202ENST00000367427 TMEFF1Q8IYR6 380 aa9.41□□□□□ -0.9
CFHR3-202ENST00000367427 TCTN2Q96GX1 697 aa9.41□□□□□ -0.9
CFHR3-202ENST00000367427 CCDC136Q96JN2 1154 aa9.41□□□□□ -0.9
CFHR3-202ENST00000367427 FOXP3Q9BZS1 431 aa9.41□□□□□ -0.9
CFHR3-202ENST00000367427 NOP56O00567 594 aaKnown RBP9.4□□□□□ -0.9
CFHR3-202ENST00000367427 SDSP20132 328 aa9.4□□□□□ -0.9
CFHR3-202ENST00000367427 WAPLQ7Z5K2 1190 aa9.4□□□□□ -0.9
CFHR3-202ENST00000367427 LINC00116Q8NCU8 138 aa9.4□□□□□ -0.9
CFHR3-202ENST00000367427 BVESQ8NE79 360 aa9.4□□□□□ -0.9
CFHR3-202ENST00000367427 ZNF512BQ96KM6 892 aaPredicted RBP9.4□□□□□ -0.9
CFHR3-202ENST00000367427 PLCD4Q9BRC7 762 aa9.4□□□□□ -0.9
CFHR3-202ENST00000367427 MKRN2Q9H000 416 aaKnown RBP9.4□□□□□ -0.9
CFHR3-202ENST00000367427 SLC52A1Q9NWF4 448 aa9.4□□□□□ -0.9
CFHR3-202ENST00000367427 EID1Q9Y6B2 187 aa9.4□□□□□ -0.9
CFHR3-202ENST00000367427 SASH1O94885 1247 aa9.39□□□□□ -0.91
CFHR3-202ENST00000367427 CDR1P51861 262 aa9.39□□□□□ -0.91
CFHR3-202ENST00000367427 ERVFRD-1P60508 538 aa9.39□□□□□ -0.91
CFHR3-202ENST00000367427 ANKRD39Q53RE8 183 aa9.39□□□□□ -0.91
CFHR3-202ENST00000367427 CEP128Q6ZU80 1094 aa9.39□□□□□ -0.91
CFHR3-202ENST00000367427 DDX46Q7L014 1031 aaKnown RBP9.39□□□□□ -0.91
CFHR3-202ENST00000367427 AHI1Q8N157 1196 aa9.39□□□□□ -0.91
CFHR3-202ENST00000367427 PPM1KQ8N3J5 372 aa9.39□□□□□ -0.91
CFHR3-202ENST00000367427 AFAP1L2Q8N4X5 818 aa9.39□□□□□ -0.91
CFHR3-202ENST00000367427 ZNF655Q8N720 491 aaPredicted RBP9.39□□□□□ -0.91
CFHR3-202ENST00000367427 ZNF513Q8N8E2 541 aaPredicted RBP9.39□□□□□ -0.91
CFHR3-202ENST00000367427 WHRNQ9P202 907 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms