RNA–Protein interactions for RNA: ENST00000367404.8

NUP43-203, Transcript of nucleoporin 43, humanhuman

TSL 2 BASIC

Gene NUP43, Length 1,089 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-203ENST00000367404 Q9Y3F1 56 aa11.66□□□□□ -0.54
NUP43-203ENST00000367404 TSPY3P0CV98 308 aa11.65□□□□□ -0.54
NUP43-203ENST00000367404 TSPY8P0CW00 308 aa11.65□□□□□ -0.54
NUP43-203ENST00000367404 SMPD1P17405 629 aa11.65□□□□□ -0.54
NUP43-203ENST00000367404 PDE4BQ07343 736 aa11.65□□□□□ -0.54
NUP43-203ENST00000367404 ITGA7Q13683 1181 aa11.65□□□□□ -0.54
NUP43-203ENST00000367404 FSCN1Q16658 493 aaKnown RBP11.65□□□□□ -0.54
NUP43-203ENST00000367404 TSHZ3Q63HK5 1081 aa11.65□□□□□ -0.54
NUP43-203ENST00000367404 TAPT1Q6NXT6 567 aa11.65□□□□□ -0.54
NUP43-203ENST00000367404 CHURC1Q8WUH1 139 aa11.65□□□□□ -0.54
NUP43-203ENST00000367404 STAG1Q8WVM7 1258 aa11.65□□□□□ -0.54
NUP43-203ENST00000367404 NKX2-4Q9H2Z4 354 aa11.65□□□□□ -0.54
NUP43-203ENST00000367404 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.65□□□□□ -0.54
NUP43-203ENST00000367404 FOXP2O15409 715 aa11.64□□□□□ -0.55
NUP43-203ENST00000367404 B4GALT4O60513 344 aa11.64□□□□□ -0.55
NUP43-203ENST00000367404 FGBP02675 491 aa11.64□□□□□ -0.55
NUP43-203ENST00000367404 PTGS1P23219 599 aa11.64□□□□□ -0.55
NUP43-203ENST00000367404 SLC1A4P43007 532 aa11.64□□□□□ -0.55
NUP43-203ENST00000367404 NOVP48745 357 aa11.64□□□□□ -0.55
NUP43-203ENST00000367404 TFAP4Q01664 338 aa11.64□□□□□ -0.55
NUP43-203ENST00000367404 PPARAQ07869 468 aa11.64□□□□□ -0.55
NUP43-203ENST00000367404 C20orf194Q5TEA3 1177 aa11.64□□□□□ -0.55
NUP43-203ENST00000367404 TRERF1Q96PN7 1200 aa11.64□□□□□ -0.55
NUP43-203ENST00000367404 SEC62Q99442 399 aaKnown RBP11.64□□□□□ -0.55
NUP43-203ENST00000367404 NACAP1Q9BZK3 213 aa11.64□□□□□ -0.55
NUP43-203ENST00000367404 DCTPP1Q9H773 170 aa11.64□□□□□ -0.55
NUP43-203ENST00000367404 VTA1Q9NP79 307 aa11.64□□□□□ -0.55
NUP43-203ENST00000367404 CYP39A1Q9NYL5 469 aa11.64□□□□□ -0.55
NUP43-203ENST00000367404 DYNC1LI2O43237 492 aaPredicted RBP11.63□□□□□ -0.55
NUP43-203ENST00000367404 ZEB2O60315 1214 aa11.63□□□□□ -0.55
NUP43-203ENST00000367404 APPP05067 770 aa11.63□□□□□ -0.55
NUP43-203ENST00000367404 ALAS1P13196 640 aa11.63□□□□□ -0.55
NUP43-203ENST00000367404 CCL23P55773 120 aa11.63□□□□□ -0.55
NUP43-203ENST00000367404 MRPS5P82675 430 aaKnown RBP11.63□□□□□ -0.55
NUP43-203ENST00000367404 KCNC4Q03721 635 aa11.63□□□□□ -0.55
NUP43-203ENST00000367404 LRRFIP1Q32MZ4 808 aaKnown RBP11.63□□□□□ -0.55
NUP43-203ENST00000367404 MUM1L1Q5H9M0 696 aa11.63□□□□□ -0.55
NUP43-203ENST00000367404 TMEM63BQ5T3F8 832 aa11.63□□□□□ -0.55
NUP43-203ENST00000367404 IQSEC1Q6DN90 963 aa11.63□□□□□ -0.55
NUP43-203ENST00000367404 OTOP2Q7RTS6 562 aa11.63□□□□□ -0.55
NUP43-203ENST00000367404 FBXO16Q8IX29 292 aaPredicted RBP11.63□□□□□ -0.55
NUP43-203ENST00000367404 PI4K2BQ8TCG2 481 aa11.63□□□□□ -0.55
NUP43-203ENST00000367404 ADAMTS19Q8TE59 1207 aa11.63□□□□□ -0.55
NUP43-203ENST00000367404 PPM1EQ8WY54 764 aa11.63□□□□□ -0.55
NUP43-203ENST00000367404 AP5M1Q9H0R1 490 aa11.63□□□□□ -0.55
NUP43-203ENST00000367404 TRPV6Q9H1D0 765 aa11.63□□□□□ -0.55
NUP43-203ENST00000367404 SLC28A3Q9HAS3 691 aa11.63□□□□□ -0.55
NUP43-203ENST00000367404 PDGFCQ9NRA1 345 aa11.63□□□□□ -0.55
NUP43-203ENST00000367404 PRR12Q9ULL5 1215 aa11.63□□□□□ -0.55
NUP43-203ENST00000367404 DDX49Q9Y6V7 483 aaKnown RBP11.63□□□□□ -0.55
NUP43-203ENST00000367404 TTC41PQ6P2S7 1318 aa11.62□□□□□ -0.55
NUP43-203ENST00000367404 REV3LO60673 3130 aa11.62□□□□□ -0.55
NUP43-203ENST00000367404 TRANK1O15050 2925 aa11.62□□□□□ -0.55
NUP43-203ENST00000367404 LOC102724159A0A0B4J2E5 919 aa11.62□□□□□ -0.55
NUP43-203ENST00000367404 RGS20O76081 388 aa11.62□□□□□ -0.55
NUP43-203ENST00000367404 SLC3A2P08195 630 aaKnown RBP11.62□□□□□ -0.55
NUP43-203ENST00000367404 MCCP23508 829 aa11.62□□□□□ -0.55
NUP43-203ENST00000367404 PSMC6P62333 389 aa11.62□□□□□ -0.55
NUP43-203ENST00000367404 IKQ13123 557 aaPredicted RBP11.62□□□□□ -0.55
NUP43-203ENST00000367404 PWP2Q15269 919 aaKnown RBP11.62□□□□□ -0.55
NUP43-203ENST00000367404 ZMYM1Q5SVZ6 1142 aa11.62□□□□□ -0.55
NUP43-203ENST00000367404 RCSD1Q6JBY9 416 aa11.62□□□□□ -0.55
NUP43-203ENST00000367404 NOL8Q76FK4 1167 aaKnown RBP11.62□□□□□ -0.55
NUP43-203ENST00000367404 RASGRP2Q7LDG7 609 aa11.62□□□□□ -0.55
NUP43-203ENST00000367404 UHRF1Q96T88 793 aaPredicted RBP11.62□□□□□ -0.55
NUP43-203ENST00000367404 NAPBQ9H115 298 aa11.62□□□□□ -0.55
NUP43-203ENST00000367404 ALDH8A1Q9H2A2 487 aaPredicted RBP11.62□□□□□ -0.55
NUP43-203ENST00000367404 RANBP17Q9H2T7 1088 aaKnown RBP11.62□□□□□ -0.55
NUP43-203ENST00000367404 IL17RBQ9NRM6 502 aa11.62□□□□□ -0.55
NUP43-203ENST00000367404 RCAN3Q9UKA8 241 aa11.62□□□□□ -0.55
NUP43-203ENST00000367404 PCDHA11Q9Y5I1 949 aa11.62□□□□□ -0.55
NUP43-203ENST00000367404 MYH4Q9Y623 1939 aa11.62□□□□□ -0.55
NUP43-203ENST00000367404 BDP1A6H8Y1 2624 aa11.61□□□□□ -0.55
NUP43-203ENST00000367404 RBM47A0AV96 593 aaKnown RBP11.61□□□□□ -0.55
NUP43-203ENST00000367404 ICAM1P05362 532 aa11.61□□□□□ -0.55
NUP43-203ENST00000367404 PFKMP08237 780 aa11.61□□□□□ -0.55
NUP43-203ENST00000367404 IGFBP4P22692 258 aa11.61□□□□□ -0.55
NUP43-203ENST00000367404 DUSP28Q4G0W2 176 aa11.61□□□□□ -0.55
NUP43-203ENST00000367404 SWT1Q5T5J6 900 aaKnown RBP11.61□□□□□ -0.55
NUP43-203ENST00000367404 PPP2R2DQ66LE6 453 aa11.61□□□□□ -0.55
NUP43-203ENST00000367404 KCTD1Q719H9 257 aa11.61□□□□□ -0.55
NUP43-203ENST00000367404 RPUSD2Q8IZ73 545 aaKnown RBP11.61□□□□□ -0.55
NUP43-203ENST00000367404 CCPG1Q9ULG6 757 aa11.61□□□□□ -0.55
NUP43-203ENST00000367404 ISY1Q9ULR0 285 aaKnown RBP11.61□□□□□ -0.55
NUP43-203ENST00000367404 STX8Q9UNK0 236 aa11.61□□□□□ -0.55
NUP43-203ENST00000367404 SLC4A7Q9Y6M7 1214 aa11.61□□□□□ -0.55
NUP43-203ENST00000367404 MCM3APO60318 1980 aa11.6□□□□□ -0.55
NUP43-203ENST00000367404 TSPY2A6NKD2 308 aa11.6□□□□□ -0.55
NUP43-203ENST00000367404 POU3F3P20264 500 aaPredicted RBP11.6□□□□□ -0.55
NUP43-203ENST00000367404 ALDH5A1P51649 535 aaPredicted RBP11.6□□□□□ -0.55
NUP43-203ENST00000367404 RABGGTBP53611 331 aa11.6□□□□□ -0.55
NUP43-203ENST00000367404 SNAP25P60880 206 aa11.6□□□□□ -0.55
NUP43-203ENST00000367404 PURAQ00577 322 aaKnown RBP11.6□□□□□ -0.55
NUP43-203ENST00000367404 CCDC85BQ15834 202 aaPredicted RBP11.6□□□□□ -0.55
NUP43-203ENST00000367404 BTNL9Q6UXG8 535 aa11.6□□□□□ -0.55
NUP43-203ENST00000367404 NSMFQ6X4W1 530 aa11.6□□□□□ -0.55
NUP43-203ENST00000367404 EEPD1Q7L9B9 569 aa11.6□□□□□ -0.55
NUP43-203ENST00000367404 DCAF4Q8WV16 495 aa11.6□□□□□ -0.55
NUP43-203ENST00000367404 SCLYQ96I15 445 aa11.6□□□□□ -0.55
NUP43-203ENST00000367404 PURBQ96QR8 312 aaKnown RBP11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms