RNA–Protein interactions for RNA: ENST00000366442.2

SHC1-201, Transcript of SHC adaptor protein 1, humanhuman

TSL 3

Gene SHC1, Length 780 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-201ENST00000366442 RMDN3Q96TC7 470 aa27.44■■□□□ 1.98
SHC1-201ENST00000366442 LY9Q9HBG7 655 aa27.44■■□□□ 1.98
SHC1-201ENST00000366442 PCDHA1Q9Y5I3 950 aa27.44■■□□□ 1.98
SHC1-201ENST00000366442 OPLAHO14841 1288 aa27.43■■□□□ 1.98
SHC1-201ENST00000366442 CPT1AP50416 773 aa27.43■■□□□ 1.98
SHC1-201ENST00000366442 TMEM87BQ96K49 555 aa27.43■■□□□ 1.98
SHC1-201ENST00000366442 TLR3O15455 904 aaKnown RBP27.42■■□□□ 1.98
SHC1-201ENST00000366442 PRC1O43663 620 aa27.42■■□□□ 1.98
SHC1-201ENST00000366442 CYTH3O43739 400 aa27.42■■□□□ 1.98
SHC1-201ENST00000366442 DDAH1O94760 285 aa27.42■■□□□ 1.98
SHC1-201ENST00000366442 CFBP00751 764 aa27.42■■□□□ 1.98
SHC1-201ENST00000366442 TIMP1P01033 207 aa27.42■■□□□ 1.98
SHC1-201ENST00000366442 ITGA7Q13683 1181 aa27.42■■□□□ 1.98
SHC1-201ENST00000366442 TTLL4Q14679 1199 aa27.42■■□□□ 1.98
SHC1-201ENST00000366442 TMTC2Q8N394 836 aa27.42■■□□□ 1.98
SHC1-201ENST00000366442 PIGSQ96S52 555 aa27.42■■□□□ 1.98
SHC1-201ENST00000366442 POLR3EQ9NVU0 708 aa27.42■■□□□ 1.98
SHC1-201ENST00000366442 BAZ2BQ9UIF8 2168 aaKnown RBP27.41■■□□□ 1.98
SHC1-201ENST00000366442 PNMA6FA0A0J9YX94 578 aa27.41■■□□□ 1.98
SHC1-201ENST00000366442 CD4P01730 458 aa27.41■■□□□ 1.98
SHC1-201ENST00000366442 SHHQ15465 462 aa27.41■■□□□ 1.98
SHC1-201ENST00000366442 STXBP2Q15833 593 aa27.41■■□□□ 1.98
SHC1-201ENST00000366442 BRDTQ58F21 947 aaPredicted RBP27.41■■□□□ 1.98
SHC1-201ENST00000366442 HOMER1Q86YM7 354 aa27.41■■□□□ 1.98
SHC1-201ENST00000366442 ZNF654Q8IZM8 581 aa27.41■■□□□ 1.98
SHC1-201ENST00000366442 OR6J1Q8NGC5 347 aa27.41■■□□□ 1.98
SHC1-201ENST00000366442 TXNP10599 105 aaKnown RBP27.4■■□□□ 1.98
SHC1-201ENST00000366442 RNF20Q5VTR2 975 aa27.4■■□□□ 1.98
SHC1-201ENST00000366442 ARHGEF16Q5VV41 709 aa27.4■■□□□ 1.98
SHC1-201ENST00000366442 CCDC136Q96JN2 1154 aa27.4■■□□□ 1.98
SHC1-201ENST00000366442 PXMP2Q9NR77 195 aa27.4■■□□□ 1.98
SHC1-201ENST00000366442 GRIN2DO15399 1336 aa27.4■■□□□ 1.98
SHC1-201ENST00000366442 SH2B2O14492 632 aaPredicted RBP27.39■■□□□ 1.98
SHC1-201ENST00000366442 CDC45O75419 566 aa27.39■■□□□ 1.98
SHC1-201ENST00000366442 KIF5BP33176 963 aa27.39■■□□□ 1.98
SHC1-201ENST00000366442 LIFRP42702 1097 aa27.39■■□□□ 1.98
SHC1-201ENST00000366442 FPGSQ05932 587 aa27.39■■□□□ 1.98
SHC1-201ENST00000366442 C9orf50Q5SZB4 431 aa27.39■■□□□ 1.98
SHC1-201ENST00000366442 CCDC62Q6P9F0 684 aa27.39■■□□□ 1.98
SHC1-201ENST00000366442 CTCFLQ8NI51 663 aaPredicted RBP27.39■■□□□ 1.98
SHC1-201ENST00000366442 GPHNQ9NQX3 736 aaPredicted RBP27.39■■□□□ 1.98
SHC1-201ENST00000366442 A6NJR5 290 aa27.38■■□□□ 1.97
SHC1-201ENST00000366442 SMARCA1P28370 1054 aa27.38■■□□□ 1.97
SHC1-201ENST00000366442 PURAQ00577 322 aaKnown RBP27.38■■□□□ 1.97
SHC1-201ENST00000366442 MFSD5Q6N075 450 aa27.38■■□□□ 1.97
SHC1-201ENST00000366442 LZTS2Q9BRK4 669 aa27.38■■□□□ 1.97
SHC1-201ENST00000366442 SPZ1Q9BXG8 430 aa27.38■■□□□ 1.97
SHC1-201ENST00000366442 KPNA6O60684 536 aa27.37■■□□□ 1.97
SHC1-201ENST00000366442 EIF3JO75822 258 aaKnown RBP27.37■■□□□ 1.97
SHC1-201ENST00000366442 ARIH2O95376 493 aa27.37■■□□□ 1.97
SHC1-201ENST00000366442 NR3C2P08235 984 aa27.37■■□□□ 1.97
SHC1-201ENST00000366442 EIF2AK2P19525 551 aaKnown RBP27.37■■□□□ 1.97
SHC1-201ENST00000366442 COPS5Q92905 334 aa27.37■■□□□ 1.97
SHC1-201ENST00000366442 KIAA1217Q5T5P2 1943 aa27.37■■□□□ 1.97
SHC1-201ENST00000366442 CCDC69A6NI79 296 aa27.36■■□□□ 1.97
SHC1-201ENST00000366442 GNAQP50148 359 aa27.36■■□□□ 1.97
SHC1-201ENST00000366442 PSMC6P62333 389 aa27.36■■□□□ 1.97
SHC1-201ENST00000366442 NFXL1Q6ZNB6 911 aa27.36■■□□□ 1.97
SHC1-201ENST00000366442 SEPT14Q6ZU15 432 aa27.36■■□□□ 1.97
SHC1-201ENST00000366442 MTG1Q9BT17 334 aaPredicted RBP27.36■■□□□ 1.97
SHC1-201ENST00000366442 MYL10Q9BUA6 226 aa27.36■■□□□ 1.97
SHC1-201ENST00000366442 GCOM1H8Y6P7 765 aaPredicted RBP27.35■■□□□ 1.97
SHC1-201ENST00000366442 MYL3P08590 195 aa27.35■■□□□ 1.97
SHC1-201ENST00000366442 POLR2MP0CAP2 368 aa27.35■■□□□ 1.97
SHC1-201ENST00000366442 CALM1P0DP23 149 aa27.35■■□□□ 1.97
SHC1-201ENST00000366442 CALM2P0DP24 149 aa27.35■■□□□ 1.97
SHC1-201ENST00000366442 CALM3P0DP25 149 aa27.35■■□□□ 1.97
SHC1-201ENST00000366442 EPHB4P54760 987 aa27.35■■□□□ 1.97
SHC1-201ENST00000366442 COL9A3Q14050 684 aaPredicted RBP27.35■■□□□ 1.97
SHC1-201ENST00000366442 DEFB123Q8N688 67 aa27.35■■□□□ 1.97
SHC1-201ENST00000366442 PDCD2LQ9BRP1 358 aa27.35■■□□□ 1.97
SHC1-201ENST00000366442 SCN10AQ9Y5Y9 1956 aa27.35■■□□□ 1.97
SHC1-201ENST00000366442 HOXA13P31271 388 aaPredicted RBP27.34■■□□□ 1.97
SHC1-201ENST00000366442 PPIGQ13427 754 aaKnown RBP eCLIP27.34■■□□□ 1.974e-8■■■□□ 15
SHC1-201ENST00000366442 TSGA10IPQ3SY00 556 aa27.34■■□□□ 1.97
SHC1-201ENST00000366442 FAM109BQ6ICB4 259 aaPredicted RBP27.34■■□□□ 1.97
SHC1-201ENST00000366442 RRP36Q96EU6 259 aaKnown RBP27.34■■□□□ 1.97
SHC1-201ENST00000366442 GH1P01241 217 aa27.33■■□□□ 1.97
SHC1-201ENST00000366442 LY6KQ17RY6 165 aa27.33■■□□□ 1.97
SHC1-201ENST00000366442 SGMS1Q86VZ5 419 aa27.33■■□□□ 1.97
SHC1-201ENST00000366442 TMEM199Q8N511 208 aa27.33■■□□□ 1.97
SHC1-201ENST00000366442 ALDH8A1Q9H2A2 487 aaPredicted RBP27.33■■□□□ 1.97
SHC1-201ENST00000366442 DDX41Q9UJV9 622 aaKnown RBP27.33■■□□□ 1.97
SHC1-201ENST00000366442 B4GALT4O60513 344 aa27.32■■□□□ 1.96
SHC1-201ENST00000366442 VSIG10LQ86VR7 867 aa27.32■■□□□ 1.96
SHC1-201ENST00000366442 EMID1Q96A84 441 aaPredicted RBP27.32■■□□□ 1.96
SHC1-201ENST00000366442 RNPC3Q96LT9 517 aaKnown RBP27.32■■□□□ 1.96
SHC1-201ENST00000366442 NEK1Q96PY6 1258 aa27.32■■□□□ 1.96
SHC1-201ENST00000366442 TRPV6Q9H1D0 765 aa27.32■■□□□ 1.96
SHC1-201ENST00000366442 SLC12A7Q9Y666 1083 aa27.32■■□□□ 1.96
SHC1-201ENST00000366442 SMAD3P84022 425 aaKnown RBP27.31■■□□□ 1.96
SHC1-201ENST00000366442 ARHGAP1Q07960 439 aa27.31■■□□□ 1.96
SHC1-201ENST00000366442 PGM5Q15124 567 aa27.31■■□□□ 1.96
SHC1-201ENST00000366442 PPP1R12CQ9BZL4 782 aa27.31■■□□□ 1.96
SHC1-201ENST00000366442 HIPK3Q9H422 1215 aa27.31■■□□□ 1.96
SHC1-201ENST00000366442 SEC63Q9UGP8 760 aaKnown RBP27.31■■□□□ 1.96
SHC1-201ENST00000366442 MRVI1Q9Y6F6 885 aa27.31■■□□□ 1.96
SHC1-201ENST00000366442 SUPT20HL2P0C7V6 817 aa27.3■■□□□ 1.96
SHC1-201ENST00000366442 KRT32Q14532 448 aa27.3■■□□□ 1.96
SHC1-201ENST00000366442 NFRKBQ6P4R8 1299 aa27.3■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms