RNA–Protein interactions for RNA: ENST00000364700.1

RNU4-56P-201, Transcript of RNA, U4 small nuclear 56, pseudogene, humanhuman

BASIC

Gene RNU4-56P, Length 142 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-56P-201ENST00000364700 SLC12A9Q9BXP2 914 aa3.6□□□□□ -1.83
RNU4-56P-201ENST00000364700 GBP3Q9H0R5 595 aa3.6□□□□□ -1.83
RNU4-56P-201ENST00000364700 NOL6Q9H6R4 1146 aaKnown RBP3.6□□□□□ -1.83
RNU4-56P-201ENST00000364700 CHST7Q9NS84 486 aa3.6□□□□□ -1.83
RNU4-56P-201ENST00000364700 NPFFR2Q9Y5X5 522 aa3.6□□□□□ -1.83
RNU4-56P-201ENST00000364700 ZC3H12DA2A288 527 aaKnown RBP3.59□□□□□ -1.83
RNU4-56P-201ENST00000364700 IRS4O14654 1257 aaPredicted RBP3.59□□□□□ -1.83
RNU4-56P-201ENST00000364700 AURKAO14965 403 aa3.59□□□□□ -1.83
RNU4-56P-201ENST00000364700 NRDCO43847 1150 aa3.59□□□□□ -1.83
RNU4-56P-201ENST00000364700 CDC45O75419 566 aa3.59□□□□□ -1.83
RNU4-56P-201ENST00000364700 PPM1BO75688 479 aa3.59□□□□□ -1.83
RNU4-56P-201ENST00000364700 GSNP06396 782 aa3.59□□□□□ -1.83
RNU4-56P-201ENST00000364700 VIL1P09327 827 aaKnown RBP3.59□□□□□ -1.83
RNU4-56P-201ENST00000364700 PNLIPP16233 465 aa3.59□□□□□ -1.83
RNU4-56P-201ENST00000364700 POU3F3P20264 500 aaPredicted RBP3.59□□□□□ -1.83
RNU4-56P-201ENST00000364700 CANXP27824 592 aaKnown RBP3.59□□□□□ -1.83
RNU4-56P-201ENST00000364700 L1CAMP32004 1257 aa3.59□□□□□ -1.83
RNU4-56P-201ENST00000364700 MAP4K2Q12851 820 aa3.59□□□□□ -1.83
RNU4-56P-201ENST00000364700 CBX2Q14781 532 aaPredicted RBP3.59□□□□□ -1.83
RNU4-56P-201ENST00000364700 CLEC16AQ2KHT3 1053 aa3.59□□□□□ -1.83
RNU4-56P-201ENST00000364700 SV2CQ496J9 727 aa3.59□□□□□ -1.83
RNU4-56P-201ENST00000364700 CRTC3Q6UUV7 619 aa3.59□□□□□ -1.83
RNU4-56P-201ENST00000364700 C16orf86Q6ZW13 317 aa3.59□□□□□ -1.83
RNU4-56P-201ENST00000364700 HOMER1Q86YM7 354 aa3.59□□□□□ -1.83
RNU4-56P-201ENST00000364700 SYNPOQ8N3V7 929 aa3.59□□□□□ -1.83
RNU4-56P-201ENST00000364700 TMEM145Q8NBT3 493 aa3.59□□□□□ -1.83
RNU4-56P-201ENST00000364700 LINC00116Q8NCU8 138 aa3.59□□□□□ -1.83
RNU4-56P-201ENST00000364700 FRS2Q8WU20 508 aa3.59□□□□□ -1.83
RNU4-56P-201ENST00000364700 GPATCH3Q96I76 525 aa3.59□□□□□ -1.83
RNU4-56P-201ENST00000364700 FCRL3Q96P31 734 aaPredicted RBP3.59□□□□□ -1.83
RNU4-56P-201ENST00000364700 FEZ1Q99689 392 aa3.59□□□□□ -1.83
RNU4-56P-201ENST00000364700 CNTD2Q9H8S5 307 aa3.59□□□□□ -1.83
RNU4-56P-201ENST00000364700 NCOA5Q9HCD5 579 aaKnown RBP3.59□□□□□ -1.83
RNU4-56P-201ENST00000364700 TRIM39Q9HCM9 518 aa3.59□□□□□ -1.83
RNU4-56P-201ENST00000364700 LUC7LQ9NQ29 371 aaKnown RBP3.59□□□□□ -1.83
RNU4-56P-201ENST00000364700 CYP26B1Q9NR63 512 aa3.59□□□□□ -1.83
RNU4-56P-201ENST00000364700 AKT3Q9Y243 479 aa3.59□□□□□ -1.83
RNU4-56P-201ENST00000364700 MRPS23Q9Y3D9 190 aaKnown RBP3.59□□□□□ -1.83
RNU4-56P-201ENST00000364700 ASXL2Q76L83 1435 aa3.59□□□□□ -1.84
RNU4-56P-201ENST00000364700 TRAV20A0A0B4J274 112 aa3.58□□□□□ -1.84
RNU4-56P-201ENST00000364700 CCDC163A0A0D9SF12 145 aa3.58□□□□□ -1.84
RNU4-56P-201ENST00000364700 VAMP4O75379 141 aa3.58□□□□□ -1.84
RNU4-56P-201ENST00000364700 KCNH1O95259 989 aa3.58□□□□□ -1.84
RNU4-56P-201ENST00000364700 EFEMP2O95967 443 aa3.58□□□□□ -1.84
RNU4-56P-201ENST00000364700 IFNGR1P15260 489 aa3.58□□□□□ -1.84
RNU4-56P-201ENST00000364700 VAV1P15498 845 aa3.58□□□□□ -1.84
RNU4-56P-201ENST00000364700 VIPR1P32241 457 aa3.58□□□□□ -1.84
RNU4-56P-201ENST00000364700 EPHB3P54753 998 aa3.58□□□□□ -1.84
RNU4-56P-201ENST00000364700 ERVFRD-1P60508 538 aa3.58□□□□□ -1.84
RNU4-56P-201ENST00000364700 EFEMP1Q12805 493 aa3.58□□□□□ -1.84
RNU4-56P-201ENST00000364700 HSP90AA2PQ14568 343 aaPredicted RBP3.58□□□□□ -1.84
RNU4-56P-201ENST00000364700 SLC14A2Q15849 920 aa3.58□□□□□ -1.84
RNU4-56P-201ENST00000364700 SPATS1Q496A3 300 aa3.58□□□□□ -1.84
RNU4-56P-201ENST00000364700 MBLAC2Q68D91 279 aa3.58□□□□□ -1.84
RNU4-56P-201ENST00000364700 RCSD1Q6JBY9 416 aa3.58□□□□□ -1.84
RNU4-56P-201ENST00000364700 CNKSR3Q6P9H4 555 aa3.58□□□□□ -1.84
RNU4-56P-201ENST00000364700 FRMD5Q7Z6J6 570 aa3.58□□□□□ -1.84
RNU4-56P-201ENST00000364700 CCDC103Q8IW40 242 aa3.58□□□□□ -1.84
RNU4-56P-201ENST00000364700 SCUBE1Q8IWY4 988 aa3.58□□□□□ -1.84
RNU4-56P-201ENST00000364700 LINC01356Q8N9X3 169 aa3.58□□□□□ -1.84
RNU4-56P-201ENST00000364700 TMEM52Q8NDY8 209 aa3.58□□□□□ -1.84
RNU4-56P-201ENST00000364700 SLC7A14Q8TBB6 771 aa3.58□□□□□ -1.84
RNU4-56P-201ENST00000364700 FEZF2Q8TBJ5 459 aa3.58□□□□□ -1.84
RNU4-56P-201ENST00000364700 APPBP2Q92624 585 aa3.58□□□□□ -1.84
RNU4-56P-201ENST00000364700 MAP6Q96JE9 813 aa3.58□□□□□ -1.84
RNU4-56P-201ENST00000364700 IER2Q9BTL4 223 aa3.58□□□□□ -1.84
RNU4-56P-201ENST00000364700 DHRS4Q9BTZ2 278 aa3.58□□□□□ -1.84
RNU4-56P-201ENST00000364700 MRPL4Q9BYD3 311 aaKnown RBP3.58□□□□□ -1.84
RNU4-56P-201ENST00000364700 ASCC2Q9H1I8 757 aaPredicted RBP3.58□□□□□ -1.84
RNU4-56P-201ENST00000364700 EPB41L4AQ9HCS5 686 aaPredicted RBP3.58□□□□□ -1.84
RNU4-56P-201ENST00000364700 TMEFF2Q9UIK5 374 aaPredicted RBP3.58□□□□□ -1.84
RNU4-56P-201ENST00000364700 FBXL21Q9UKT6 434 aa3.58□□□□□ -1.84
RNU4-56P-201ENST00000364700 CD2APQ9Y5K6 639 aa3.58□□□□□ -1.84
RNU4-56P-201ENST00000364700 A0A087X0B3 334 aa3.57□□□□□ -1.84
RNU4-56P-201ENST00000364700 TRBV23-1A0A0A0MS06 115 aa3.57□□□□□ -1.84
RNU4-56P-201ENST00000364700 LOC101059915A0A1B0GWI6 518 aaPredicted RBP3.57□□□□□ -1.84
RNU4-56P-201ENST00000364700 PLD2O14939 933 aa3.57□□□□□ -1.84
RNU4-56P-201ENST00000364700 FGF10O15520 208 aaPredicted RBP3.57□□□□□ -1.84
RNU4-56P-201ENST00000364700 PRODHO43272 600 aa3.57□□□□□ -1.84
RNU4-56P-201ENST00000364700 USP2O75604 605 aaPredicted RBP3.57□□□□□ -1.84
RNU4-56P-201ENST00000364700 ASMTLO95671 621 aa3.57□□□□□ -1.84
RNU4-56P-201ENST00000364700 THBDP07204 575 aa3.57□□□□□ -1.84
RNU4-56P-201ENST00000364700 RPL10P27635 214 aaKnown RBP3.57□□□□□ -1.84
RNU4-56P-201ENST00000364700 HOXC12P31275 282 aa3.57□□□□□ -1.84
RNU4-56P-201ENST00000364700 GALK1P51570 392 aa3.57□□□□□ -1.84
RNU4-56P-201ENST00000364700 CDR1P51861 262 aa3.57□□□□□ -1.84
RNU4-56P-201ENST00000364700 TMEM62Q0P6H9 643 aa3.57□□□□□ -1.84
RNU4-56P-201ENST00000364700 PRSS53Q2L4Q9 553 aa3.57□□□□□ -1.84
RNU4-56P-201ENST00000364700 FNDC3BQ53EP0 1204 aaKnown RBP3.57□□□□□ -1.84
RNU4-56P-201ENST00000364700 TM4SF20Q53R12 229 aa3.57□□□□□ -1.84
RNU4-56P-201ENST00000364700 ACBD5Q5T8D3 534 aaPredicted RBP3.57□□□□□ -1.84
RNU4-56P-201ENST00000364700 POMZP3Q6PJE2 187 aa3.57□□□□□ -1.84
RNU4-56P-201ENST00000364700 ADAT2Q7Z6V5 191 aaKnown RBP3.57□□□□□ -1.84
RNU4-56P-201ENST00000364700 FAM129CQ86XR2 697 aa3.57□□□□□ -1.84
RNU4-56P-201ENST00000364700 MZB1Q8WU39 189 aa3.57□□□□□ -1.84
RNU4-56P-201ENST00000364700 SCLYQ96I15 445 aa3.57□□□□□ -1.84
RNU4-56P-201ENST00000364700 ZDHHC15Q96MV8 337 aa3.57□□□□□ -1.84
RNU4-56P-201ENST00000364700 CDIP1Q9H305 208 aa3.57□□□□□ -1.84
RNU4-56P-201ENST00000364700 CNOT11Q9UKZ1 510 aaKnown RBP3.57□□□□□ -1.84
RNU4-56P-201ENST00000364700 WDR3Q9UNX4 943 aaKnown RBP eCLIP3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms