RNA–Protein interactions for RNA: ENST00000363858.1

RNU6-271P-201, Transcript of RNA, U6 small nuclear 271, pseudogene, humanhuman

BASIC

Gene RNU6-271P, Length 105 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-271P-201ENST00000363858 PABPC1P11940 636 aaKnown RBP3□□□□□ -1.93
RNU6-271P-201ENST00000363858 ATF2P15336 505 aa3□□□□□ -1.93
RNU6-271P-201ENST00000363858 CFPP27918 469 aa3□□□□□ -1.93
RNU6-271P-201ENST00000363858 LTBRP36941 435 aa3□□□□□ -1.93
RNU6-271P-201ENST00000363858 BCL6P41182 706 aa3□□□□□ -1.93
RNU6-271P-201ENST00000363858 MC3RP41968 323 aa3□□□□□ -1.93
RNU6-271P-201ENST00000363858 MAPKAPK2P49137 400 aa3□□□□□ -1.93
RNU6-271P-201ENST00000363858 NCKAP1LP55160 1127 aa3□□□□□ -1.93
RNU6-271P-201ENST00000363858 SRSF3P84103 164 aaKnown RBP3□□□□□ -1.93
RNU6-271P-201ENST00000363858 PRR5P85299 388 aa3□□□□□ -1.93
RNU6-271P-201ENST00000363858 FAM209AQ5JX71 171 aa3□□□□□ -1.93
RNU6-271P-201ENST00000363858 E4F1Q66K89 784 aaPredicted RBP3□□□□□ -1.93
RNU6-271P-201ENST00000363858 BICRALQ6AI39 1079 aa3□□□□□ -1.93
RNU6-271P-201ENST00000363858 PAQR3Q6TCH7 311 aa3□□□□□ -1.93
RNU6-271P-201ENST00000363858 ATG14Q6ZNE5 492 aa3□□□□□ -1.93
RNU6-271P-201ENST00000363858 LCNL1Q6ZST4 164 aa3□□□□□ -1.93
RNU6-271P-201ENST00000363858 LDHDQ86WU2 507 aa3□□□□□ -1.93
RNU6-271P-201ENST00000363858 LILRB2Q8N423 598 aa3□□□□□ -1.93
RNU6-271P-201ENST00000363858 LZTR1Q8N653 840 aa3□□□□□ -1.93
RNU6-271P-201ENST00000363858 BHLHE22Q8NFJ8 381 aaPredicted RBP3□□□□□ -1.93
RNU6-271P-201ENST00000363858 PMFBP1Q8TBY8 1022 aa3□□□□□ -1.93
RNU6-271P-201ENST00000363858 DIO2Q92813 273 aa3□□□□□ -1.93
RNU6-271P-201ENST00000363858 SLC26A8Q96RN1 970 aa3□□□□□ -1.93
RNU6-271P-201ENST00000363858 DNAJC7Q99615 494 aa3□□□□□ -1.93
RNU6-271P-201ENST00000363858 SYT3Q9BQG1 590 aa3□□□□□ -1.93
RNU6-271P-201ENST00000363858 HIRIP3Q9BW71 556 aaPredicted RBP3□□□□□ -1.93
RNU6-271P-201ENST00000363858 PIF1Q9H611 641 aa3□□□□□ -1.93
RNU6-271P-201ENST00000363858 MARCH2Q9P0N8 246 aa3□□□□□ -1.93
RNU6-271P-201ENST00000363858 SMG5Q9UPR3 1016 aaKnown RBP3□□□□□ -1.93
RNU6-271P-201ENST00000363858 R3HCC1Q9Y3T6 440 aaKnown RBP3□□□□□ -1.93
RNU6-271P-201ENST00000363858 X6R8D5 127 aa3□□□□□ -1.93
RNU6-271P-201ENST00000363858 SGSM2O43147 1006 aa2.99□□□□□ -1.93
RNU6-271P-201ENST00000363858 NPHS1O60500 1241 aa2.99□□□□□ -1.93
RNU6-271P-201ENST00000363858 SEMA7AO75326 666 aa2.99□□□□□ -1.93
RNU6-271P-201ENST00000363858 CPP00450 1065 aa2.99□□□□□ -1.93
RNU6-271P-201ENST00000363858 NTRK1P04629 796 aa2.99□□□□□ -1.93
RNU6-271P-201ENST00000363858 MPOP05164 745 aa2.99□□□□□ -1.93
RNU6-271P-201ENST00000363858 KCNJ6P48051 423 aa2.99□□□□□ -1.93
RNU6-271P-201ENST00000363858 ZNF200P98182 395 aaPredicted RBP2.99□□□□□ -1.93
RNU6-271P-201ENST00000363858 KCNAB2Q13303 367 aa2.99□□□□□ -1.93
RNU6-271P-201ENST00000363858 HSP90AA2PQ14568 343 aaPredicted RBP2.99□□□□□ -1.93
RNU6-271P-201ENST00000363858 SF3A1Q15459 793 aaKnown RBP2.99□□□□□ -1.93
RNU6-271P-201ENST00000363858 MTERF2Q49AM1 385 aa2.99□□□□□ -1.93
RNU6-271P-201ENST00000363858 LCE4AQ5TA78 99 aa2.99□□□□□ -1.93
RNU6-271P-201ENST00000363858 WWC2Q6AWC2 1192 aa2.99□□□□□ -1.93
RNU6-271P-201ENST00000363858 SPOCD1Q6ZMY3 1216 aa2.99□□□□□ -1.93
RNU6-271P-201ENST00000363858 LRP10Q7Z4F1 713 aa2.99□□□□□ -1.93
RNU6-271P-201ENST00000363858 ZBTB38Q8NAP3 1195 aaPredicted RBP2.99□□□□□ -1.93
RNU6-271P-201ENST00000363858 MZB1Q8WU39 189 aa2.99□□□□□ -1.93
RNU6-271P-201ENST00000363858 KISS1RQ969F8 398 aaPredicted RBP2.99□□□□□ -1.93
RNU6-271P-201ENST00000363858 MKL1Q969V6 931 aa2.99□□□□□ -1.93
RNU6-271P-201ENST00000363858 LNPKQ9C0E8 428 aa2.99□□□□□ -1.93
RNU6-271P-201ENST00000363858 OSBPL2Q9H1P3 480 aa2.99□□□□□ -1.93
RNU6-271P-201ENST00000363858 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP2.99□□□□□ -1.93
RNU6-271P-201ENST00000363858 TRBV23OR9-2A0A075B6M9 112 aa2.98□□□□□ -1.93
RNU6-271P-201ENST00000363858 TRAV20A0A0B4J274 112 aa2.98□□□□□ -1.93
RNU6-271P-201ENST00000363858 DBX1A6NMT0 343 aa2.98□□□□□ -1.93
RNU6-271P-201ENST00000363858 C22orf46C9J442 243 aa2.98□□□□□ -1.93
RNU6-271P-201ENST00000363858 NPIPB6E9PJ23 425 aa2.98□□□□□ -1.93
RNU6-271P-201ENST00000363858 F8W031 263 aaPredicted RBP2.98□□□□□ -1.93
RNU6-271P-201ENST00000363858 N4BP3O15049 544 aa2.98□□□□□ -1.93
RNU6-271P-201ENST00000363858 PLA2G1BP04054 148 aaKnown RBP2.98□□□□□ -1.93
RNU6-271P-201ENST00000363858 ASGR2P07307 311 aa2.98□□□□□ -1.93
RNU6-271P-201ENST00000363858 PI3P19957 117 aa2.98□□□□□ -1.93
RNU6-271P-201ENST00000363858 PMLP29590 882 aa2.98□□□□□ -1.93
RNU6-271P-201ENST00000363858 THBS2P35442 1172 aa2.98□□□□□ -1.93
RNU6-271P-201ENST00000363858 ARL4AP40617 200 aa2.98□□□□□ -1.93
RNU6-271P-201ENST00000363858 RAP1GAPP47736 663 aa2.98□□□□□ -1.93
RNU6-271P-201ENST00000363858 LINC00310P59036 64 aa2.98□□□□□ -1.93
RNU6-271P-201ENST00000363858 DLX2Q07687 328 aaPredicted RBP2.98□□□□□ -1.93
RNU6-271P-201ENST00000363858 SSRP1Q08945 709 aaKnown RBP2.98□□□□□ -1.93
RNU6-271P-201ENST00000363858 BMS1Q14692 1282 aaKnown RBP2.98□□□□□ -1.93
RNU6-271P-201ENST00000363858 NR1I3Q14994 352 aa2.98□□□□□ -1.93
RNU6-271P-201ENST00000363858 KCNA10Q16322 511 aa2.98□□□□□ -1.93
RNU6-271P-201ENST00000363858 STYK1Q6J9G0 422 aa2.98□□□□□ -1.93
RNU6-271P-201ENST00000363858 ZC3H14Q6PJT7 736 aaKnown RBP2.98□□□□□ -1.93
RNU6-271P-201ENST00000363858 NSMFQ6X4W1 530 aa2.98□□□□□ -1.93
RNU6-271P-201ENST00000363858 USP53Q70EK8 1073 aa2.98□□□□□ -1.93
RNU6-271P-201ENST00000363858 RIOX2Q8IUF8 465 aa2.98□□□□□ -1.93
RNU6-271P-201ENST00000363858 LRRC47Q8N1G4 583 aaKnown RBP2.98□□□□□ -1.93
RNU6-271P-201ENST00000363858 NETO2Q8NC67 525 aa2.98□□□□□ -1.93
RNU6-271P-201ENST00000363858 KCTD13Q8WZ19 329 aa2.98□□□□□ -1.93
RNU6-271P-201ENST00000363858 TSPAN17Q96FV3 270 aa2.98□□□□□ -1.93
RNU6-271P-201ENST00000363858 CCDC140Q96MF4 163 aa2.98□□□□□ -1.93
RNU6-271P-201ENST00000363858 PPP1R16BQ96T49 567 aa2.98□□□□□ -1.93
RNU6-271P-201ENST00000363858 PHF20Q9BVI0 1012 aa2.98□□□□□ -1.93
RNU6-271P-201ENST00000363858 GPR27Q9NS67 375 aa2.98□□□□□ -1.93
RNU6-271P-201ENST00000363858 BTG4Q9NY30 223 aa2.98□□□□□ -1.93
RNU6-271P-201ENST00000363858 WASF3Q9UPY6 502 aa2.98□□□□□ -1.93
RNU6-271P-201ENST00000363858 CDK11AQ9UQ88 783 aaPredicted RBP2.98□□□□□ -1.93
RNU6-271P-201ENST00000363858 TRAF6Q9Y4K3 522 aa2.98□□□□□ -1.93
RNU6-271P-201ENST00000363858 PCDHA2Q9Y5H9 948 aa2.98□□□□□ -1.93
RNU6-271P-201ENST00000363858 TIMM13Q9Y5L4 95 aaPredicted RBP2.98□□□□□ -1.93
RNU6-271P-201ENST00000363858 KDM2BQ8NHM5 1336 aa2.97□□□□□ -1.93
RNU6-271P-201ENST00000363858 IQCA1LA6NCM1 817 aa2.97□□□□□ -1.93
RNU6-271P-201ENST00000363858 AGRPO00253 132 aa2.97□□□□□ -1.93
RNU6-271P-201ENST00000363858 U2SURPO15042 1029 aaKnown RBP2.97□□□□□ -1.93
RNU6-271P-201ENST00000363858 C8BP07358 591 aa2.97□□□□□ -1.93
RNU6-271P-201ENST00000363858 LIMS1P48059 325 aa2.97□□□□□ -1.93
RNU6-271P-201ENST00000363858 SLC6A11P48066 632 aa2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms