RNA–Protein interactions for RNA: ENST00000361909.8

CMTM3-201, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM3, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-201ENST00000361909 CAPZA3Q96KX2 299 aa21.17■□□□□ 0.98
CMTM3-201ENST00000361909 PCP11498 1178 aaKnown RBP21.16■□□□□ 0.98
CMTM3-201ENST00000361909 IDEP14735 1019 aa21.16■□□□□ 0.98
CMTM3-201ENST00000361909 PPARAQ07869 468 aa21.16■□□□□ 0.98
CMTM3-201ENST00000361909 MFSD6Q6ZSS7 791 aa21.16■□□□□ 0.98
CMTM3-201ENST00000361909 NOC3LQ8WTT2 800 aaKnown RBP21.16■□□□□ 0.98
CMTM3-201ENST00000361909 EPSTI1Q96J88 318 aa21.16■□□□□ 0.98
CMTM3-201ENST00000361909 ERICH2A1L162 156 aa21.16■□□□□ 0.98
CMTM3-201ENST00000361909 H0YHG0 523 aa21.16■□□□□ 0.98
CMTM3-201ENST00000361909 CHUKO15111 745 aa21.16■□□□□ 0.98
CMTM3-201ENST00000361909 KRT2P35908 639 aa21.16■□□□□ 0.98
CMTM3-201ENST00000361909 THAP9Q9H5L6 903 aa21.16■□□□□ 0.98
CMTM3-201ENST00000361909 SNX12Q9UMY4 172 aa21.16■□□□□ 0.98
CMTM3-201ENST00000361909 CAPN7Q9Y6W3 813 aa21.16■□□□□ 0.98
CMTM3-201ENST00000361909 SNED1Q8TER0 1413 aa21.15■□□□□ 0.98
CMTM3-201ENST00000361909 TMCO5BA8MYB1 307 aa21.15■□□□□ 0.98
CMTM3-201ENST00000361909 SRGAP2O75044 1071 aa21.15■□□□□ 0.98
CMTM3-201ENST00000361909 DNM2P50570 870 aa21.15■□□□□ 0.98
CMTM3-201ENST00000361909 GTF2IP78347 998 aa21.15■□□□□ 0.98
CMTM3-201ENST00000361909 WTAPQ15007 396 aa21.15■□□□□ 0.98
CMTM3-201ENST00000361909 GRIK5Q16478 980 aa21.15■□□□□ 0.98
CMTM3-201ENST00000361909 GLE1Q53GS7 698 aaKnown RBP21.15■□□□□ 0.98
CMTM3-201ENST00000361909 KDM7AQ6ZMT4 941 aa21.15■□□□□ 0.98
CMTM3-201ENST00000361909 SUPT20HQ8NEM7 779 aa21.15■□□□□ 0.98
CMTM3-201ENST00000361909 ZSWIM5Q9P217 1185 aa21.15■□□□□ 0.98
CMTM3-201ENST00000361909 UBE2Q2LH0YL09 131 aa21.14■□□□□ 0.98
CMTM3-201ENST00000361909 WDR59Q6PJI9 974 aa21.14■□□□□ 0.98
CMTM3-201ENST00000361909 GSPT2Q8IYD1 628 aaKnown RBP21.14■□□□□ 0.98
CMTM3-201ENST00000361909 CCDC155Q8N6L0 562 aa21.14■□□□□ 0.98
CMTM3-201ENST00000361909 TTLL6Q8N841 843 aa21.14■□□□□ 0.98
CMTM3-201ENST00000361909 NKX2-3Q8TAU0 364 aa21.14■□□□□ 0.98
CMTM3-201ENST00000361909 ZNF507Q8TCN5 953 aa21.14■□□□□ 0.98
CMTM3-201ENST00000361909 SECISBP2LQ93073 1101 aaKnown RBP21.14■□□□□ 0.98
CMTM3-201ENST00000361909 DCP1AQ9NPI6 582 aaPredicted RBP21.14■□□□□ 0.98
CMTM3-201ENST00000361909 TAOK2Q9UL54 1235 aa21.14■□□□□ 0.98
CMTM3-201ENST00000361909 G3V3G9 751 aa21.14■□□□□ 0.97
CMTM3-201ENST00000361909 TCP1P17987 556 aaKnown RBP21.14■□□□□ 0.97
CMTM3-201ENST00000361909 VAV2P52735 878 aa21.14■□□□□ 0.97
CMTM3-201ENST00000361909 CTDSPL2Q05D32 466 aa21.14■□□□□ 0.97
CMTM3-201ENST00000361909 KIF5AQ12840 1032 aa21.14■□□□□ 0.97
CMTM3-201ENST00000361909 SBK1Q52WX2 424 aa21.14■□□□□ 0.97
CMTM3-201ENST00000361909 DCAF8Q5TAQ9 597 aa21.14■□□□□ 0.97
CMTM3-201ENST00000361909 MTFR1LQ9H019 292 aa21.14■□□□□ 0.97
CMTM3-201ENST00000361909 JADE2Q9NQC1 790 aa21.14■□□□□ 0.97
CMTM3-201ENST00000361909 GPR75-ASB3A0A0A6YYF3 556 aa21.13■□□□□ 0.97
CMTM3-201ENST00000361909 PDE2AO00408 941 aaPredicted RBP21.13■□□□□ 0.97
CMTM3-201ENST00000361909 PARP1P09874 1014 aaKnown RBP21.13■□□□□ 0.97
CMTM3-201ENST00000361909 ATP2C1P98194 919 aaPredicted RBP21.13■□□□□ 0.97
CMTM3-201ENST00000361909 C2orf54Q08AI8 447 aa21.13■□□□□ 0.97
CMTM3-201ENST00000361909 NEDD9Q14511 834 aa21.13■□□□□ 0.97
CMTM3-201ENST00000361909 TACC1O75410 805 aa21.13■□□□□ 0.97
CMTM3-201ENST00000361909 FGRP09769 529 aa21.13■□□□□ 0.97
CMTM3-201ENST00000361909 PLCG2P16885 1265 aa21.13■□□□□ 0.97
CMTM3-201ENST00000361909 RDXP35241 583 aaKnown RBP21.13■□□□□ 0.97
CMTM3-201ENST00000361909 PDXDC2PQ6P474 469 aa21.13■□□□□ 0.97
CMTM3-201ENST00000361909 OXER1Q8TDS5 423 aa21.13■□□□□ 0.97
CMTM3-201ENST00000361909 GDAP1L1Q96MZ0 367 aa21.13■□□□□ 0.97
CMTM3-201ENST00000361909 EPN3Q9H201 632 aa21.13■□□□□ 0.97
CMTM3-201ENST00000361909 STIM2Q9P246 746 aa21.13■□□□□ 0.97
CMTM3-201ENST00000361909 ARPP21Q9UBL0 812 aaPredicted RBP21.13■□□□□ 0.97
CMTM3-201ENST00000361909 BAZ2AQ9UIF9 1905 aaKnown RBP21.12■□□□□ 0.97
CMTM3-201ENST00000361909 ZMYND10O75800 440 aa21.12■□□□□ 0.97
CMTM3-201ENST00000361909 TGFB2P61812 414 aa21.12■□□□□ 0.97
CMTM3-201ENST00000361909 FKBP1AP62942 108 aaKnown RBP21.12■□□□□ 0.97
CMTM3-201ENST00000361909 DIXDC1Q155Q3 683 aa21.12■□□□□ 0.97
CMTM3-201ENST00000361909 FIGNQ5HY92 759 aa21.12■□□□□ 0.97
CMTM3-201ENST00000361909 CREG2Q8IUH2 290 aa21.12■□□□□ 0.97
CMTM3-201ENST00000361909 PHF20Q9BVI0 1012 aa21.12■□□□□ 0.97
CMTM3-201ENST00000361909 GAKO14976 1311 aa21.12■□□□□ 0.97
CMTM3-201ENST00000361909 A0A1W2PQJ5 194 aa21.12■□□□□ 0.97
CMTM3-201ENST00000361909 USO1O60763 962 aaKnown RBP21.12■□□□□ 0.97
CMTM3-201ENST00000361909 KCNA3P22001 575 aa21.12■□□□□ 0.97
CMTM3-201ENST00000361909 POLD1P28340 1107 aa21.12■□□□□ 0.97
CMTM3-201ENST00000361909 ZBED6P86452 979 aa21.12■□□□□ 0.97
CMTM3-201ENST00000361909 DOK7Q18PE1 504 aa21.12■□□□□ 0.97
CMTM3-201ENST00000361909 SKIDA1Q1XH10 827 aa21.12■□□□□ 0.97
CMTM3-201ENST00000361909 CD302Q8IX05 232 aa21.12■□□□□ 0.97
CMTM3-201ENST00000361909 C3orf20Q8ND61 904 aa21.12■□□□□ 0.97
CMTM3-201ENST00000361909 TTYH3Q9C0H2 523 aa21.12■□□□□ 0.97
CMTM3-201ENST00000361909 MINDY4BA8MYZ0 360 aa21.11■□□□□ 0.97
CMTM3-201ENST00000361909 MYL1P05976 194 aa21.11■□□□□ 0.97
CMTM3-201ENST00000361909 TRAPPC10P48553 1259 aa21.11■□□□□ 0.97
CMTM3-201ENST00000361909 NT5C2P49902 561 aa21.11■□□□□ 0.97
CMTM3-201ENST00000361909 SMTNP53814 917 aa21.11■□□□□ 0.97
CMTM3-201ENST00000361909 NAP1L1P55209 391 aaKnown RBP21.11■□□□□ 0.97
CMTM3-201ENST00000361909 TTMPQ5BVD1 217 aa21.11■□□□□ 0.97
CMTM3-201ENST00000361909 RTKN2Q8IZC4 609 aa21.11■□□□□ 0.97
CMTM3-201ENST00000361909 FANCBQ8NB91 859 aa21.11■□□□□ 0.97
CMTM3-201ENST00000361909 GIMAP7Q8NHV1 300 aa21.11■□□□□ 0.97
CMTM3-201ENST00000361909 VCPKMTQ9H867 229 aa21.11■□□□□ 0.97
CMTM3-201ENST00000361909 MAGEC2Q9UBF1 373 aaPredicted RBP21.11■□□□□ 0.97
CMTM3-201ENST00000361909 TACC3Q9Y6A5 838 aa21.11■□□□□ 0.97
CMTM3-201ENST00000361909 USP17L12C9JPN9 530 aa21.1■□□□□ 0.97
CMTM3-201ENST00000361909 USP17L21D6R901 530 aa21.1■□□□□ 0.97
CMTM3-201ENST00000361909 RPN1P04843 607 aaKnown RBP21.1■□□□□ 0.97
CMTM3-201ENST00000361909 CASP1P29466 404 aa21.1■□□□□ 0.97
CMTM3-201ENST00000361909 MREGQ8N565 214 aa21.1■□□□□ 0.97
CMTM3-201ENST00000361909 SPATA4Q8NEY3 305 aa21.1■□□□□ 0.97
CMTM3-201ENST00000361909 HYOU1Q9Y4L1 999 aa21.1■□□□□ 0.97
CMTM3-201ENST00000361909 SPA17Q15506 151 aa21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms