RNA–Protein interactions for RNA: ENST00000361545.9

CLIP2-202, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best) BASIC

Gene CLIP2, Length 5,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-202ENST00000361545 KMT5BQ4FZB7 885 aa20.38■□□□□ 0.85
CLIP2-202ENST00000361545 CEP128Q6ZU80 1094 aa20.38■□□□□ 0.85
CLIP2-202ENST00000361545 GRAMD1CQ8IYS0 662 aa20.38■□□□□ 0.85
CLIP2-202ENST00000361545 ZNF713Q8N859 430 aaPredicted RBP20.38■□□□□ 0.85
CLIP2-202ENST00000361545 FAM76AQ8TAV0 307 aa20.38■□□□□ 0.85
CLIP2-202ENST00000361545 WRNIP1Q96S55 665 aa20.38■□□□□ 0.85
CLIP2-202ENST00000361545 TBC1D31Q96DN5 1066 aa20.38■□□□□ 0.85
CLIP2-202ENST00000361545 NACC1Q96RE7 527 aa20.37■□□□□ 0.85
CLIP2-202ENST00000361545 JPH2Q9BR39 696 aaPredicted RBP20.37■□□□□ 0.85
CLIP2-202ENST00000361545 BRIP1Q9BX63 1249 aa20.37■□□□□ 0.85
CLIP2-202ENST00000361545 PCIF1Q9H4Z3 704 aa20.37■□□□□ 0.85
CLIP2-202ENST00000361545 CPSF1Q10570 1443 aaKnown RBP20.37■□□□□ 0.85
CLIP2-202ENST00000361545 PNMA6FA0A0J9YX94 578 aa20.37■□□□□ 0.85
CLIP2-202ENST00000361545 PPP6R2O75170 966 aa20.37■□□□□ 0.85
CLIP2-202ENST00000361545 CD2BP2O95400 341 aaKnown RBP20.37■□□□□ 0.85
CLIP2-202ENST00000361545 EXOC3L4Q17RC7 722 aa20.37■□□□□ 0.85
CLIP2-202ENST00000361545 CERKQ8TCT0 537 aa20.37■□□□□ 0.85
CLIP2-202ENST00000361545 AK8Q96MA6 479 aa20.37■□□□□ 0.85
CLIP2-202ENST00000361545 DNAJC5Q9H3Z4 198 aa20.37■□□□□ 0.85
CLIP2-202ENST00000361545 CNOT6LQ96LI5 555 aaKnown RBP20.37■□□□□ 0.85
CLIP2-202ENST00000361545 RIPOR2Q9Y4F9 1068 aa20.37■□□□□ 0.85
CLIP2-202ENST00000361545 TRIM50Q86XT4 487 aa20.37■□□□□ 0.85
CLIP2-202ENST00000361545 NLRP7Q8WX94 980 aa20.37■□□□□ 0.85
CLIP2-202ENST00000361545 CCDC51Q96ER9 411 aa20.37■□□□□ 0.85
CLIP2-202ENST00000361545 SAMD15Q9P1V8 674 aa20.37■□□□□ 0.85
CLIP2-202ENST00000361545 GPSM2P81274 684 aa20.36■□□□□ 0.85
CLIP2-202ENST00000361545 TUBB2AQ13885 445 aa20.36■□□□□ 0.85
CLIP2-202ENST00000361545 SLC44A5Q8NCS7 719 aa20.36■□□□□ 0.85
CLIP2-202ENST00000361545 TUBB2BQ9BVA1 445 aa20.36■□□□□ 0.85
CLIP2-202ENST00000361545 CDC42BPAQ5VT25 1732 aa20.36■□□□□ 0.85
CLIP2-202ENST00000361545 CLIC2O15247 247 aa20.36■□□□□ 0.85
CLIP2-202ENST00000361545 VIMP08670 466 aaKnown RBP20.36■□□□□ 0.85
CLIP2-202ENST00000361545 MARK3P27448 753 aa20.36■□□□□ 0.85
CLIP2-202ENST00000361545 MYL7Q01449 175 aa20.36■□□□□ 0.85
CLIP2-202ENST00000361545 C2orf69Q8N8R5 385 aa20.36■□□□□ 0.85
CLIP2-202ENST00000361545 GABPB2Q8TAK5 448 aaPredicted RBP20.36■□□□□ 0.85
CLIP2-202ENST00000361545 A0A1W2PQ27 194 aa20.36■□□□□ 0.85
CLIP2-202ENST00000361545 A0A1W2PQ64 194 aa20.36■□□□□ 0.85
CLIP2-202ENST00000361545 A0A1W2PQD8 194 aa20.36■□□□□ 0.85
CLIP2-202ENST00000361545 ATP5DP30049 168 aa20.36■□□□□ 0.85
CLIP2-202ENST00000361545 LIFRP42702 1097 aa20.36■□□□□ 0.85
CLIP2-202ENST00000361545 FAM83BQ5T0W9 1011 aa20.36■□□□□ 0.85
CLIP2-202ENST00000361545 CPVLQ9H3G5 476 aa20.36■□□□□ 0.85
CLIP2-202ENST00000361545 MAGEF1Q9HAY2 307 aa20.36■□□□□ 0.85
CLIP2-202ENST00000361545 POLR3EQ9NVU0 708 aa20.36■□□□□ 0.85
CLIP2-202ENST00000361545 RAB20Q9NX57 234 aa20.36■□□□□ 0.85
CLIP2-202ENST00000361545 TSKSQ9UJT2 592 aa20.36■□□□□ 0.85
CLIP2-202ENST00000361545 JCADQ9P266 1359 aa20.36■□□□□ 0.85
CLIP2-202ENST00000361545 LARGE1O95461 756 aa20.36■□□□□ 0.85
CLIP2-202ENST00000361545 GLI2P10070 1586 aa20.36■□□□□ 0.85
CLIP2-202ENST00000361545 IQGAP3Q86VI3 1631 aa20.36■□□□□ 0.85
CLIP2-202ENST00000361545 IVLP07476 585 aa20.36■□□□□ 0.85
CLIP2-202ENST00000361545 BIRC2Q13490 618 aa20.36■□□□□ 0.85
CLIP2-202ENST00000361545 CCDC121Q6ZUS5 278 aa20.36■□□□□ 0.85
CLIP2-202ENST00000361545 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.36■□□□□ 0.85
CLIP2-202ENST00000361545 GPT2Q8TD30 523 aa20.35■□□□□ 0.85
CLIP2-202ENST00000361545 CUEDC2Q9H467 287 aa20.35■□□□□ 0.85
CLIP2-202ENST00000361545 USP17L5A8MUK1 530 aa20.35■□□□□ 0.85
CLIP2-202ENST00000361545 HSPA1LP34931 641 aa20.35■□□□□ 0.85
CLIP2-202ENST00000361545 OSTNP61366 133 aa20.35■□□□□ 0.85
CLIP2-202ENST00000361545 PDXDC2PQ6P474 469 aa20.35■□□□□ 0.85
CLIP2-202ENST00000361545 RNF207Q6ZRF8 634 aa20.35■□□□□ 0.85
CLIP2-202ENST00000361545 MYO3BQ8WXR4 1341 aa20.35■□□□□ 0.85
CLIP2-202ENST00000361545 KCNK3O14649 394 aa20.35■□□□□ 0.85
CLIP2-202ENST00000361545 CHRNA5P30532 468 aa20.35■□□□□ 0.85
CLIP2-202ENST00000361545 NKX1-1Q15270 411 aaPredicted RBP20.35■□□□□ 0.85
CLIP2-202ENST00000361545 RSAD2Q8WXG1 361 aa20.35■□□□□ 0.85
CLIP2-202ENST00000361545 GSDMAQ96QA5 445 aa20.35■□□□□ 0.85
CLIP2-202ENST00000361545 CPDO75976 1380 aa20.35■□□□□ 0.85
CLIP2-202ENST00000361545 DGKHQ86XP1 1220 aa20.35■□□□□ 0.85
CLIP2-202ENST00000361545 PCDHB6Q9Y5E3 794 aa20.35■□□□□ 0.85
CLIP2-202ENST00000361545 CDHR2Q9BYE9 1310 aa20.34■□□□□ 0.85
CLIP2-202ENST00000361545 SEPT2Q15019 361 aa20.34■□□□□ 0.85
CLIP2-202ENST00000361545 HADHQ16836 314 aaKnown RBP20.34■□□□□ 0.85
CLIP2-202ENST00000361545 NBPF11Q86T75 865 aa20.34■□□□□ 0.85
CLIP2-202ENST00000361545 TUBGCP2Q9BSJ2 902 aa20.34■□□□□ 0.85
CLIP2-202ENST00000361545 LRFN2Q9ULH4 789 aa20.34■□□□□ 0.85
CLIP2-202ENST00000361545 ZBTB33Q86T24 672 aa20.34■□□□□ 0.85
CLIP2-202ENST00000361545 GPATCH11Q8N954 259 aa20.34■□□□□ 0.85
CLIP2-202ENST00000361545 TIGD1Q96MW7 591 aa20.34■□□□□ 0.85
CLIP2-202ENST00000361545 PNMA3Q9UL41 463 aa20.34■□□□□ 0.85
CLIP2-202ENST00000361545 NBPF26B4DH59 902 aa20.34■□□□□ 0.85
CLIP2-202ENST00000361545 RNASELQ05823 741 aaKnown RBP20.34■□□□□ 0.85
CLIP2-202ENST00000361545 NECTIN1Q15223 517 aa20.34■□□□□ 0.85
CLIP2-202ENST00000361545 NBPF10Q6P3W6 841 aaKnown RBP20.34■□□□□ 0.85
CLIP2-202ENST00000361545 SND1Q7KZF4 910 aaKnown RBP eCLIP20.34■□□□□ 0.85
CLIP2-202ENST00000361545 NBPF15Q8N660 670 aa20.34■□□□□ 0.85
CLIP2-202ENST00000361545 HAUS2Q9NVX0 235 aa20.34■□□□□ 0.85
CLIP2-202ENST00000361545 RIOK3O14730 519 aaKnown RBP20.34■□□□□ 0.85
CLIP2-202ENST00000361545 SETDB1Q15047 1291 aa20.34■□□□□ 0.85
CLIP2-202ENST00000361545 ACCSQ96QU6 501 aa20.34■□□□□ 0.85
CLIP2-202ENST00000361545 GAP43P17677 238 aa20.33■□□□□ 0.85
CLIP2-202ENST00000361545 NSFP46459 744 aaKnown RBP20.33■□□□□ 0.85
CLIP2-202ENST00000361545 VPS41P49754 854 aa20.33■□□□□ 0.85
CLIP2-202ENST00000361545 TBC1D10CQ8IV04 446 aa20.33■□□□□ 0.85
CLIP2-202ENST00000361545 NT5C1BQ96P26 610 aa20.33■□□□□ 0.85
CLIP2-202ENST00000361545 ISCA1Q9BUE6 129 aa20.33■□□□□ 0.85
CLIP2-202ENST00000361545 PCDHB4Q9Y5E5 795 aa20.33■□□□□ 0.85
CLIP2-202ENST00000361545 A0A087WWV3 80 aa20.33■□□□□ 0.85
CLIP2-202ENST00000361545 ZBTB24O43167 697 aaPredicted RBP20.33■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 93.6 ms