RNA–Protein interactions for RNA: ENST00000360688.3

GDPD3-201, Transcript of glycerophosphodiester phosphodiesterase domain containing 3, humanhuman

TSL 1 (best)

Gene GDPD3, Length 1,306 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDPD3-201ENST00000360688 PPP1R13LQ8WUF5 828 aa17.66■□□□□ 0.42
GDPD3-201ENST00000360688 RILPL2Q969X0 211 aa17.66■□□□□ 0.42
GDPD3-201ENST00000360688 MPHOSPH6Q99547 160 aaKnown RBP17.66■□□□□ 0.42
GDPD3-201ENST00000360688 LNPKQ9C0E8 428 aa17.66■□□□□ 0.42
GDPD3-201ENST00000360688 KIAA1217Q5T5P2 1943 aa17.65■□□□□ 0.42
GDPD3-201ENST00000360688 BDP1A6H8Y1 2624 aa17.65■□□□□ 0.42
GDPD3-201ENST00000360688 RAD50Q92878 1312 aa17.65■□□□□ 0.42
GDPD3-201ENST00000360688 GOLGA8HP0CJ92 632 aa17.65■□□□□ 0.42
GDPD3-201ENST00000360688 TXNP10599 105 aaKnown RBP17.65■□□□□ 0.42
GDPD3-201ENST00000360688 ATP2A2P16615 1042 aaKnown RBP17.65■□□□□ 0.42
GDPD3-201ENST00000360688 USH1GQ495M9 461 aa17.65■□□□□ 0.42
GDPD3-201ENST00000360688 FAM47CQ5HY64 1035 aa17.65■□□□□ 0.42
GDPD3-201ENST00000360688 GPATCH4Q5T3I0 446 aaKnown RBP17.65■□□□□ 0.42
GDPD3-201ENST00000360688 PPP2R2DQ66LE6 453 aa17.65■□□□□ 0.42
GDPD3-201ENST00000360688 NFRKBQ6P4R8 1299 aa17.65■□□□□ 0.42
GDPD3-201ENST00000360688 ESR2Q92731 530 aa17.65■□□□□ 0.42
GDPD3-201ENST00000360688 ASB2Q96Q27 587 aa17.65■□□□□ 0.42
GDPD3-201ENST00000360688 ZKSCAN3Q9BRR0 538 aa17.65■□□□□ 0.42
GDPD3-201ENST00000360688 UBA5Q9GZZ9 404 aa17.65■□□□□ 0.42
GDPD3-201ENST00000360688 CPVLQ9H3G5 476 aa17.65■□□□□ 0.42
GDPD3-201ENST00000360688 RNF41Q9H4P4 317 aaPredicted RBP17.65■□□□□ 0.42
GDPD3-201ENST00000360688 XIRP2A4UGR9 3374 aa17.65■□□□□ 0.42
GDPD3-201ENST00000360688 B4DLN1 442 aa17.64■□□□□ 0.41
GDPD3-201ENST00000360688 TNFRSF10AO00220 468 aa17.64■□□□□ 0.41
GDPD3-201ENST00000360688 KPNA6O60684 536 aa17.64■□□□□ 0.41
GDPD3-201ENST00000360688 MRPL12P52815 198 aaKnown RBP17.64■□□□□ 0.41
GDPD3-201ENST00000360688 DGKHQ86XP1 1220 aa17.64■□□□□ 0.41
GDPD3-201ENST00000360688 RGS22Q8NE09 1264 aa17.64■□□□□ 0.41
GDPD3-201ENST00000360688 PRRC2BQ5JSZ5 2229 aaKnown RBP17.63■□□□□ 0.41
GDPD3-201ENST00000360688 ARIH2O95376 493 aa17.63■□□□□ 0.41
GDPD3-201ENST00000360688 SDSP20132 328 aa17.63■□□□□ 0.41
GDPD3-201ENST00000360688 MFAP1P55081 439 aaKnown RBP17.63■□□□□ 0.41
GDPD3-201ENST00000360688 PTPN11Q06124 597 aaPredicted RBP17.63■□□□□ 0.41
GDPD3-201ENST00000360688 TBC1D5Q92609 795 aa17.63■□□□□ 0.41
GDPD3-201ENST00000360688 PITPNM1O00562 1244 aa17.62■□□□□ 0.41
GDPD3-201ENST00000360688 ZNF213O14771 459 aa17.62■□□□□ 0.41
GDPD3-201ENST00000360688 IQCF3P0C7M6 154 aa17.62■□□□□ 0.41
GDPD3-201ENST00000360688 ACTN1P12814 892 aa17.62■□□□□ 0.41
GDPD3-201ENST00000360688 RFC2P35250 354 aa17.62■□□□□ 0.41
GDPD3-201ENST00000360688 MRPS5P82675 430 aaKnown RBP17.62■□□□□ 0.41
GDPD3-201ENST00000360688 CCDC62Q6P9F0 684 aa17.62■□□□□ 0.41
GDPD3-201ENST00000360688 PNMA1Q8ND90 353 aa17.62■□□□□ 0.41
GDPD3-201ENST00000360688 TCF20Q9UGU0 1960 aaKnown RBP17.62■□□□□ 0.41
GDPD3-201ENST00000360688 PTPRSQ13332 1948 aa17.62■□□□□ 0.41
GDPD3-201ENST00000360688 MYH7BA7E2Y1 1941 aa17.61■□□□□ 0.41
GDPD3-201ENST00000360688 CDC37Q16543 378 aaPredicted RBP17.61■□□□□ 0.41
GDPD3-201ENST00000360688 TMEM67Q5HYA8 995 aa17.61■□□□□ 0.41
GDPD3-201ENST00000360688 IQCA1Q86XH1 822 aa17.61■□□□□ 0.41
GDPD3-201ENST00000360688 SMC5Q8IY18 1101 aa17.61■□□□□ 0.41
GDPD3-201ENST00000360688 RETREG2Q8NC44 543 aa17.61■□□□□ 0.41
GDPD3-201ENST00000360688 MAF1Q9H063 256 aa17.61■□□□□ 0.41
GDPD3-201ENST00000360688 ABCB11O95342 1321 aa17.6■□□□□ 0.41
GDPD3-201ENST00000360688 KDM4AO75164 1064 aa17.6■□□□□ 0.41
GDPD3-201ENST00000360688 CA3P07451 260 aa17.6■□□□□ 0.41
GDPD3-201ENST00000360688 NT5C2P49902 561 aa17.6■□□□□ 0.41
GDPD3-201ENST00000360688 BFSP2Q13515 415 aa17.6■□□□□ 0.41
GDPD3-201ENST00000360688 CCDC178Q5BJE1 867 aa17.6■□□□□ 0.41
GDPD3-201ENST00000360688 B4GALNT3Q6L9W6 998 aa17.6■□□□□ 0.41
GDPD3-201ENST00000360688 PLEKHM2Q8IWE5 1019 aa17.6■□□□□ 0.41
GDPD3-201ENST00000360688 ADGRF4Q8IZF3 695 aa17.6■□□□□ 0.41
GDPD3-201ENST00000360688 SYTL5Q8TDW5 730 aaPredicted RBP17.6■□□□□ 0.41
GDPD3-201ENST00000360688 ADAMTS19Q8TE59 1207 aa17.6■□□□□ 0.41
GDPD3-201ENST00000360688 AFG1LQ8WV93 481 aa17.6■□□□□ 0.41
GDPD3-201ENST00000360688 ANKS1AQ92625 1134 aa17.6■□□□□ 0.41
GDPD3-201ENST00000360688 TAAR1Q96RJ0 339 aa17.6■□□□□ 0.41
GDPD3-201ENST00000360688 SLC9A7Q96T83 725 aa17.6■□□□□ 0.41
GDPD3-201ENST00000360688 OSBPL3Q9H4L5 887 aa17.6■□□□□ 0.41
GDPD3-201ENST00000360688 COL20A1Q9P218 1284 aa17.6■□□□□ 0.41
GDPD3-201ENST00000360688 NOD1Q9Y239 953 aa17.6■□□□□ 0.41
GDPD3-201ENST00000360688 B4E1Z4 1266 aa17.59■□□□□ 0.41
GDPD3-201ENST00000360688 MMP3P08254 477 aa17.59■□□□□ 0.41
GDPD3-201ENST00000360688 CHMP4BP1P59074 171 aa17.59■□□□□ 0.41
GDPD3-201ENST00000360688 LY6KQ17RY6 165 aa17.59■□□□□ 0.41
GDPD3-201ENST00000360688 CWC27Q6UX04 472 aaKnown RBP17.59■□□□□ 0.41
GDPD3-201ENST00000360688 SEPT14Q6ZU15 432 aa17.59■□□□□ 0.41
GDPD3-201ENST00000360688 MICALL1Q8N3F8 863 aa17.59■□□□□ 0.41
GDPD3-201ENST00000360688 PHOSPHO2Q8TCD6 241 aa17.59■□□□□ 0.41
GDPD3-201ENST00000360688 NSUN6Q8TEA1 469 aaKnown RBP17.59■□□□□ 0.41
GDPD3-201ENST00000360688 FTOQ9C0B1 505 aaKnown RBP eCLIP17.59■□□□□ 0.41
GDPD3-201ENST00000360688 KAT14Q9H8E8 782 aa17.59■□□□□ 0.41
GDPD3-201ENST00000360688 RFXAPO00287 272 aa17.58■□□□□ 0.4
GDPD3-201ENST00000360688 GH1P01241 217 aa17.58■□□□□ 0.4
GDPD3-201ENST00000360688 ARHGAP1Q07960 439 aa17.58■□□□□ 0.4
GDPD3-201ENST00000360688 STXBP2Q15833 593 aa17.58■□□□□ 0.4
GDPD3-201ENST00000360688 PTGISQ16647 500 aa17.58■□□□□ 0.4
GDPD3-201ENST00000360688 QRICH1Q2TAL8 776 aa17.58■□□□□ 0.4
GDPD3-201ENST00000360688 ASPRV1Q53RT3 343 aa17.58■□□□□ 0.4
GDPD3-201ENST00000360688 MCF2L2Q86YR7 1114 aa17.58■□□□□ 0.4
GDPD3-201ENST00000360688 ENAHQ8N8S7 591 aaPredicted RBP17.58■□□□□ 0.4
GDPD3-201ENST00000360688 KAT2BQ92831 832 aa17.58■□□□□ 0.4
GDPD3-201ENST00000360688 CTAGE1Q96RT6 745 aa17.58■□□□□ 0.4
GDPD3-201ENST00000360688 IWS1Q96ST2 819 aa17.58■□□□□ 0.4
GDPD3-201ENST00000360688 ZSCAN10Q96SZ4 725 aaPredicted RBP17.58■□□□□ 0.4
GDPD3-201ENST00000360688 TSPYL2Q9H2G4 693 aaPredicted RBP17.58■□□□□ 0.4
GDPD3-201ENST00000360688 CERS4Q9HA82 394 aa17.58■□□□□ 0.4
GDPD3-201ENST00000360688 ZSWIM5Q9P217 1185 aa17.58■□□□□ 0.4
GDPD3-201ENST00000360688 POU3F3P20264 500 aaPredicted RBP17.57■□□□□ 0.4
GDPD3-201ENST00000360688 AAMPQ13685 434 aa17.57■□□□□ 0.4
GDPD3-201ENST00000360688 GDF6Q6KF10 455 aaPredicted RBP17.57■□□□□ 0.4
GDPD3-201ENST00000360688 CHST3Q7LGC8 479 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms