RNA–Protein interactions for RNA: ENST00000360642.7

CLCN3-202, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2 BASIC

Gene CLCN3, Length 3,208 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-202ENST00000360642 SYTL4Q96C24 671 aaPredicted RBP8.4□□□□□ -1.07
CLCN3-202ENST00000360642 ZKSCAN3Q9BRR0 538 aa8.4□□□□□ -1.07
CLCN3-202ENST00000360642 LY9Q9HBG7 655 aa8.4□□□□□ -1.07
CLCN3-202ENST00000360642 EPB41L4AQ9HCS5 686 aaPredicted RBP8.4□□□□□ -1.07
CLCN3-202ENST00000360642 CLIP2Q9UDT6 1046 aa8.4□□□□□ -1.07
CLCN3-202ENST00000360642 B4E1Z4 1266 aa8.39□□□□□ -1.07
CLCN3-202ENST00000360642 GOLGA6L19H0YKK7 550 aa8.39□□□□□ -1.07
CLCN3-202ENST00000360642 KLF4O43474 513 aa8.39□□□□□ -1.07
CLCN3-202ENST00000360642 GRIN3BO60391 1043 aa8.39□□□□□ -1.07
CLCN3-202ENST00000360642 PEX14O75381 377 aa8.39□□□□□ -1.07
CLCN3-202ENST00000360642 SLC19A1P41440 591 aa8.39□□□□□ -1.07
CLCN3-202ENST00000360642 LIFRP42702 1097 aa8.39□□□□□ -1.07
CLCN3-202ENST00000360642 METAP2P50579 478 aaKnown RBP eCLIP8.39□□□□□ -1.07
CLCN3-202ENST00000360642 LRMPQ12912 555 aa8.39□□□□□ -1.07
CLCN3-202ENST00000360642 STK38Q15208 465 aa8.39□□□□□ -1.07
CLCN3-202ENST00000360642 ADAMTSL4Q6UY14 1074 aa8.39□□□□□ -1.07
CLCN3-202ENST00000360642 SPATC1Q76KD6 591 aa8.39□□□□□ -1.07
CLCN3-202ENST00000360642 IFNL3Q8IZI9 196 aa8.39□□□□□ -1.07
CLCN3-202ENST00000360642 UBR7Q8N806 425 aa8.39□□□□□ -1.07
CLCN3-202ENST00000360642 CNTNAP3BQ96NU0 1288 aa8.39□□□□□ -1.07
CLCN3-202ENST00000360642 MAP7D2Q96T17 732 aa8.39□□□□□ -1.07
CLCN3-202ENST00000360642 CNTNAP3Q9BZ76 1288 aa8.39□□□□□ -1.07
CLCN3-202ENST00000360642 PCDH12Q9NPG4 1184 aa8.39□□□□□ -1.07
CLCN3-202ENST00000360642 TACC3Q9Y6A5 838 aa8.39□□□□□ -1.07
CLCN3-202ENST00000360642 RTL9Q8NET4 1388 aa8.39□□□□□ -1.07
CLCN3-202ENST00000360642 CICQ96RK0 1608 aaPredicted RBP8.39□□□□□ -1.07
CLCN3-202ENST00000360642 TIAM2Q8IVF5 1701 aa8.39□□□□□ -1.07
CLCN3-202ENST00000360642 A0A087WWV3 80 aa8.39□□□□□ -1.07
CLCN3-202ENST00000360642 A0A0G2JS52 829 aa8.39□□□□□ -1.07
CLCN3-202ENST00000360642 WNT7AO00755 349 aa8.39□□□□□ -1.07
CLCN3-202ENST00000360642 CDKL5O76039 1030 aa8.39□□□□□ -1.07
CLCN3-202ENST00000360642 APPP05067 770 aa8.39□□□□□ -1.07
CLCN3-202ENST00000360642 SLC5A1P13866 664 aa8.39□□□□□ -1.07
CLCN3-202ENST00000360642 CMA1P23946 247 aa8.39□□□□□ -1.07
CLCN3-202ENST00000360642 NFX1Q12986 1120 aaKnown RBP8.39□□□□□ -1.07
CLCN3-202ENST00000360642 SLC39A14Q15043 492 aa8.39□□□□□ -1.07
CLCN3-202ENST00000360642 ZNF697Q5TEC3 545 aa8.39□□□□□ -1.07
CLCN3-202ENST00000360642 PDE12Q6L8Q7 609 aaKnown RBP8.39□□□□□ -1.07
CLCN3-202ENST00000360642 AIFM3Q96NN9 605 aa8.39□□□□□ -1.07
CLCN3-202ENST00000360642 BPIFA3Q9BQP9 254 aa8.39□□□□□ -1.07
CLCN3-202ENST00000360642 ZFATQ9P243 1243 aa8.39□□□□□ -1.07
CLCN3-202ENST00000360642 NID2Q14112 1375 aa8.39□□□□□ -1.07
CLCN3-202ENST00000360642 CAMTA2O94983 1202 aa8.39□□□□□ -1.07
CLCN3-202ENST00000360642 MAP3K12Q12852 859 aa8.39□□□□□ -1.07
CLCN3-202ENST00000360642 DRC7Q8IY82 874 aa8.39□□□□□ -1.07
CLCN3-202ENST00000360642 MAGEB6Q8N7X4 407 aa8.39□□□□□ -1.07
CLCN3-202ENST00000360642 CACTINQ8WUQ7 758 aaKnown RBP8.39□□□□□ -1.07
CLCN3-202ENST00000360642 UBE2Q2Q8WVN8 375 aa8.39□□□□□ -1.07
CLCN3-202ENST00000360642 TMEM74Q96NL1 305 aa8.39□□□□□ -1.07
CLCN3-202ENST00000360642 ALG1Q9BT22 464 aa8.39□□□□□ -1.07
CLCN3-202ENST00000360642 UTP14AQ9BVJ6 771 aaKnown RBP8.39□□□□□ -1.07
CLCN3-202ENST00000360642 SEC31BQ9NQW1 1179 aa8.39□□□□□ -1.07
CLCN3-202ENST00000360642 FAM13BQ9NYF5 915 aa8.39□□□□□ -1.07
CLCN3-202ENST00000360642 PHLPP1O60346 1717 aa8.38□□□□□ -1.07
CLCN3-202ENST00000360642 AHDC1Q5TGY3 1603 aaPredicted RBP8.38□□□□□ -1.07
CLCN3-202ENST00000360642 GSG1L2A8MUP6 293 aa8.38□□□□□ -1.07
CLCN3-202ENST00000360642 SNAP23O00161 211 aa8.38□□□□□ -1.07
CLCN3-202ENST00000360642 ENC1O14682 589 aa8.38□□□□□ -1.07
CLCN3-202ENST00000360642 WDHD1O75717 1129 aaPredicted RBP8.38□□□□□ -1.07
CLCN3-202ENST00000360642 U2AF2P26368 475 aaKnown RBP eCLIP8.38□□□□□ -1.077e-9■■■■□ 20.9
CLCN3-202ENST00000360642 SYNE3Q6ZMZ3 975 aa8.38□□□□□ -1.07
CLCN3-202ENST00000360642 ERCC4Q92889 916 aaPredicted RBP8.38□□□□□ -1.07
CLCN3-202ENST00000360642 MAP3K14Q99558 947 aa8.38□□□□□ -1.07
CLCN3-202ENST00000360642 INCENPQ9NQS7 918 aa8.38□□□□□ -1.07
CLCN3-202ENST00000360642 ZSWIM5Q9P217 1185 aa8.38□□□□□ -1.07
CLCN3-202ENST00000360642 BCORQ6W2J9 1755 aa8.38□□□□□ -1.07
CLCN3-202ENST00000360642 FAM237AA0A1B0GTK4 181 aa8.38□□□□□ -1.07
CLCN3-202ENST00000360642 RANBP6O60518 1105 aaKnown RBP8.38□□□□□ -1.07
CLCN3-202ENST00000360642 PPP6R2O75170 966 aa8.38□□□□□ -1.07
CLCN3-202ENST00000360642 ZNF202O95125 648 aa8.38□□□□□ -1.07
CLCN3-202ENST00000360642 CRKLP46109 303 aaKnown RBP8.38□□□□□ -1.07
CLCN3-202ENST00000360642 RBM6P78332 1123 aaKnown RBP8.38□□□□□ -1.07
CLCN3-202ENST00000360642 PTPAQ15257 358 aa8.38□□□□□ -1.07
CLCN3-202ENST00000360642 PARP10Q53GL7 1025 aa8.38□□□□□ -1.07
CLCN3-202ENST00000360642 KRT40Q6A162 431 aa8.38□□□□□ -1.07
CLCN3-202ENST00000360642 LRRC8AQ8IWT6 810 aa8.38□□□□□ -1.07
CLCN3-202ENST00000360642 CEP57L1Q8IYX8 460 aa8.38□□□□□ -1.07
CLCN3-202ENST00000360642 GAS2L1Q99501 681 aaPredicted RBP8.38□□□□□ -1.07
CLCN3-202ENST00000360642 SDF4Q9BRK5 362 aa8.38□□□□□ -1.07
CLCN3-202ENST00000360642 GRIP2Q9C0E4 1043 aa8.38□□□□□ -1.07
CLCN3-202ENST00000360642 NAT10Q9H0A0 1025 aaKnown RBP8.38□□□□□ -1.07
CLCN3-202ENST00000360642 FAM86C1Q9NVL1 165 aa8.38□□□□□ -1.07
CLCN3-202ENST00000360642 ECM29Q5VYK3 1845 aa8.38□□□□□ -1.07
CLCN3-202ENST00000360642 PNPLA7Q6ZV29 1317 aa8.38□□□□□ -1.07
CLCN3-202ENST00000360642 BCL9LQ86UU0 1499 aa8.38□□□□□ -1.07
CLCN3-202ENST00000360642 LAMB2P55268 1798 aa8.37□□□□□ -1.07
CLCN3-202ENST00000360642 BECN2A8MW95 431 aa8.37□□□□□ -1.07
CLCN3-202ENST00000360642 ZBTB43O43298 467 aa8.37□□□□□ -1.07
CLCN3-202ENST00000360642 MBD4O95243 580 aa8.37□□□□□ -1.07
CLCN3-202ENST00000360642 NTSR2O95665 410 aa8.37□□□□□ -1.07
CLCN3-202ENST00000360642 RXRAP19793 462 aa8.37□□□□□ -1.07
CLCN3-202ENST00000360642 MTERF4Q7Z6M4 381 aaKnown RBP8.37□□□□□ -1.07
CLCN3-202ENST00000360642 PHKBQ93100 1093 aa8.37□□□□□ -1.07
CLCN3-202ENST00000360642 TIGD1Q96MW7 591 aa8.37□□□□□ -1.07
CLCN3-202ENST00000360642 ZIC5Q96T25 663 aa8.37□□□□□ -1.07
CLCN3-202ENST00000360642 MPHOSPH8Q99549 860 aa8.37□□□□□ -1.07
CLCN3-202ENST00000360642 HPSEQ9Y251 543 aa8.37□□□□□ -1.07
CLCN3-202ENST00000360642 STK36Q9NRP7 1315 aa8.37□□□□□ -1.07
CLCN3-202ENST00000360642 A0A1W2PNR3 127 aa8.37□□□□□ -1.07
CLCN3-202ENST00000360642 PFKFB1P16118 471 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms