RNA–Protein interactions for RNA: ENST00000360238.6

CUEDC1-201, Transcript of CUE domain containing 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CUEDC1, Length 2,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-201ENST00000360238 MCM6Q14566 821 aa29.44■■■□□ 2.3
CUEDC1-201ENST00000360238 CCDC96Q2M329 555 aa29.44■■■□□ 2.3
CUEDC1-201ENST00000360238 KIF4BQ2VIQ3 1234 aa29.44■■■□□ 2.3
CUEDC1-201ENST00000360238 TMEM119Q4V9L6 283 aa29.44■■■□□ 2.3
CUEDC1-201ENST00000360238 RAD54LQ92698 747 aa29.44■■■□□ 2.3
CUEDC1-201ENST00000360238 IQCDQ96DY2 449 aa29.44■■■□□ 2.3
CUEDC1-201ENST00000360238 GCFC2P16383 781 aaKnown RBP29.43■■■□□ 2.3
CUEDC1-201ENST00000360238 PDE6BP35913 854 aa29.43■■■□□ 2.3
CUEDC1-201ENST00000360238 MTIF2P46199 727 aaKnown RBP29.43■■■□□ 2.3
CUEDC1-201ENST00000360238 CHMP4BP1P59074 171 aa29.43■■■□□ 2.3
CUEDC1-201ENST00000360238 TUBB4BP68371 445 aa29.43■■■□□ 2.3
CUEDC1-201ENST00000360238 FIGNQ5HY92 759 aa29.43■■■□□ 2.3
CUEDC1-201ENST00000360238 SNX29Q8TEQ0 813 aa29.43■■■□□ 2.3
CUEDC1-201ENST00000360238 TMX4Q9H1E5 349 aaPredicted RBP29.43■■■□□ 2.3
CUEDC1-201ENST00000360238 REXO2Q9Y3B8 237 aaKnown RBP29.43■■■□□ 2.3
CUEDC1-201ENST00000360238 POTEMA6NI47 508 aa29.43■■■□□ 2.3
CUEDC1-201ENST00000360238 TBC1D8BQ0IIM8 1120 aa29.43■■■□□ 2.3
CUEDC1-201ENST00000360238 MIIPQ5JXC2 388 aa29.43■■■□□ 2.3
CUEDC1-201ENST00000360238 WDR59Q6PJI9 974 aa29.43■■■□□ 2.3
CUEDC1-201ENST00000360238 ERGIC2Q96RQ1 377 aa29.43■■■□□ 2.3
CUEDC1-201ENST00000360238 NAP1L4Q99733 375 aaKnown RBP29.43■■■□□ 2.3
CUEDC1-201ENST00000360238 ZNF646O15015 1829 aaPredicted RBP29.43■■■□□ 2.3
CUEDC1-201ENST00000360238 TRIM21P19474 475 aaKnown RBP29.42■■■□□ 2.3
CUEDC1-201ENST00000360238 UBE2SQ16763 222 aa29.42■■■□□ 2.3
CUEDC1-201ENST00000360238 TTBK2Q6IQ55 1244 aa29.42■■■□□ 2.3
CUEDC1-201ENST00000360238 NOC4LQ9BVI4 516 aaKnown RBP29.42■■■□□ 2.3
CUEDC1-201ENST00000360238 GLT8D2Q9H1C3 349 aa29.42■■■□□ 2.3
CUEDC1-201ENST00000360238 SEMA6BQ9H3T3 888 aa29.42■■■□□ 2.3
CUEDC1-201ENST00000360238 ABCB11O95342 1321 aa29.42■■■□□ 2.3
CUEDC1-201ENST00000360238 G3V3G9 751 aa29.42■■■□□ 2.3
CUEDC1-201ENST00000360238 MPHOSPH10O00566 681 aaKnown RBP29.42■■■□□ 2.3
CUEDC1-201ENST00000360238 DCAF8Q5TAQ9 597 aa29.42■■■□□ 2.3
CUEDC1-201ENST00000360238 ZNF662Q6ZS27 426 aa29.42■■■□□ 2.3
CUEDC1-201ENST00000360238 GUF1Q8N442 669 aaKnown RBP29.42■■■□□ 2.3
CUEDC1-201ENST00000360238 ZDHHC15Q96MV8 337 aa29.42■■■□□ 2.3
CUEDC1-201ENST00000360238 HAUS4Q9H6D7 363 aa29.42■■■□□ 2.3
CUEDC1-201ENST00000360238 SLC39A2Q9NP94 309 aa29.42■■■□□ 2.3
CUEDC1-201ENST00000360238 DDX25Q9UHL0 483 aaKnown RBP29.42■■■□□ 2.3
CUEDC1-201ENST00000360238 A0A1W2PQJ5 194 aa29.41■■■□□ 2.3
CUEDC1-201ENST00000360238 HSPA1LP34931 641 aa29.41■■■□□ 2.3
CUEDC1-201ENST00000360238 CRKP46108 304 aa29.41■■■□□ 2.3
CUEDC1-201ENST00000360238 ZBED6P86452 979 aa29.41■■■□□ 2.3
CUEDC1-201ENST00000360238 MASTLQ96GX5 879 aa29.41■■■□□ 2.3
CUEDC1-201ENST00000360238 NFIAQ12857 509 aa29.4■■■□□ 2.3
CUEDC1-201ENST00000360238 FOXR2Q6PJQ5 311 aa29.4■■■□□ 2.3
CUEDC1-201ENST00000360238 PODNQ7Z5L7 613 aa29.4■■■□□ 2.3
CUEDC1-201ENST00000360238 USP17L10C9JJH3 530 aa29.4■■■□□ 2.3
CUEDC1-201ENST00000360238 ABL1P00519 1130 aa29.4■■■□□ 2.3
CUEDC1-201ENST00000360238 WHAMMP3Q1A5X7 153 aa29.4■■■□□ 2.3
CUEDC1-201ENST00000360238 FKBP15Q5T1M5 1219 aa29.4■■■□□ 2.3
CUEDC1-201ENST00000360238 MRIQ9BWK5 157 aa29.4■■■□□ 2.3
CUEDC1-201ENST00000360238 DHX36Q9H2U1 1008 aaKnown RBP29.4■■■□□ 2.3
CUEDC1-201ENST00000360238 ZNHIT6Q9NWK9 470 aaKnown RBP29.4■■■□□ 2.3
CUEDC1-201ENST00000360238 FGFR1OPO95684 399 aaKnown RBP29.39■■■□□ 2.3
CUEDC1-201ENST00000360238 KRT83P78385 493 aa29.39■■■□□ 2.3
CUEDC1-201ENST00000360238 LRRC63Q05C16 580 aa29.39■■■□□ 2.3
CUEDC1-201ENST00000360238 PSMD2Q13200 908 aa29.39■■■□□ 2.3
CUEDC1-201ENST00000360238 CC2D1AQ6P1N0 951 aaPredicted RBP29.39■■■□□ 2.3
CUEDC1-201ENST00000360238 HPS3Q969F9 1004 aa29.39■■■□□ 2.3
CUEDC1-201ENST00000360238 PSTPIP2Q9H939 334 aa29.39■■■□□ 2.3
CUEDC1-201ENST00000360238 RASSF10A6NK89 507 aa29.39■■■□□ 2.29
CUEDC1-201ENST00000360238 SLC16A2P36021 539 aa29.39■■■□□ 2.29
CUEDC1-201ENST00000360238 ATP2B2Q01814 1243 aa29.39■■■□□ 2.29
CUEDC1-201ENST00000360238 EHHADHQ08426 723 aa29.39■■■□□ 2.29
CUEDC1-201ENST00000360238 KCTD1Q719H9 257 aa29.39■■■□□ 2.29
CUEDC1-201ENST00000360238 PARD6BQ9BYG5 372 aa29.39■■■□□ 2.29
CUEDC1-201ENST00000360238 EPC1Q9H2F5 836 aa29.39■■■□□ 2.29
CUEDC1-201ENST00000360238 ATF5Q9Y2D1 282 aaPredicted RBP29.39■■■□□ 2.29
CUEDC1-201ENST00000360238 POTEB2H3BUK9 544 aa29.38■■■□□ 2.29
CUEDC1-201ENST00000360238 CYLC1P35663 651 aaPredicted RBP29.38■■■□□ 2.29
CUEDC1-201ENST00000360238 FKBP1AP62942 108 aaKnown RBP29.38■■■□□ 2.29
CUEDC1-201ENST00000360238 SEPT2Q15019 361 aa29.38■■■□□ 2.29
CUEDC1-201ENST00000360238 CCDC170Q8IYT3 715 aa29.38■■■□□ 2.29
CUEDC1-201ENST00000360238 DCAF4Q8WV16 495 aa29.38■■■□□ 2.29
CUEDC1-201ENST00000360238 HAS1Q92839 578 aa29.38■■■□□ 2.29
CUEDC1-201ENST00000360238 DNAJC18Q9H819 358 aa29.38■■■□□ 2.29
CUEDC1-201ENST00000360238 CDK17Q00537 523 aa29.37■■■□□ 2.29
CUEDC1-201ENST00000360238 COL23A1Q86Y22 540 aaPredicted RBP29.37■■■□□ 2.29
CUEDC1-201ENST00000360238 MKL1Q969V6 931 aa29.37■■■□□ 2.29
CUEDC1-201ENST00000360238 NUDT12Q9BQG2 462 aa29.37■■■□□ 2.29
CUEDC1-201ENST00000360238 AGPAT5Q9NUQ2 364 aa29.37■■■□□ 2.29
CUEDC1-201ENST00000360238 KDM3AQ9Y4C1 1321 aa29.37■■■□□ 2.29
CUEDC1-201ENST00000360238 HERVK_113P62684 666 aa29.37■■■□□ 2.29
CUEDC1-201ENST00000360238 DYMQ7RTS9 669 aa29.37■■■□□ 2.29
CUEDC1-201ENST00000360238 AKT1S1Q96B36 256 aa29.37■■■□□ 2.29
CUEDC1-201ENST00000360238 EEF2KMTQ96G04 330 aa29.37■■■□□ 2.29
CUEDC1-201ENST00000360238 HYIQ5T013 277 aa29.36■■■□□ 2.29
CUEDC1-201ENST00000360238 DDX12PQ92771 950 aa29.36■■■□□ 2.29
CUEDC1-201ENST00000360238 NYAP2Q9P242 653 aa29.36■■■□□ 2.29
CUEDC1-201ENST00000360238 SCN9AQ15858 1988 aa29.36■■■□□ 2.29
CUEDC1-201ENST00000360238 PSMD14O00487 310 aa29.36■■■□□ 2.29
CUEDC1-201ENST00000360238 SLC26A4O43511 780 aa29.36■■■□□ 2.29
CUEDC1-201ENST00000360238 AMPD2Q01433 879 aa29.36■■■□□ 2.29
CUEDC1-201ENST00000360238 EHBP1Q8NDI1 1231 aa29.36■■■□□ 2.29
CUEDC1-201ENST00000360238 ARFGAP3Q9NP61 516 aa29.36■■■□□ 2.29
CUEDC1-201ENST00000360238 CCDC151A5D8V7 595 aa29.35■■■□□ 2.29
CUEDC1-201ENST00000360238 KLK7P49862 253 aa29.35■■■□□ 2.29
CUEDC1-201ENST00000360238 HDLBPQ00341 1268 aaKnown RBP29.35■■■□□ 2.29
CUEDC1-201ENST00000360238 BRD3Q15059 726 aa29.35■■■□□ 2.29
CUEDC1-201ENST00000360238 KCNK18Q7Z418 384 aa29.35■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms