RNA–Protein interactions for RNA: ENST00000359541.6

GTF3C2-202, Transcript of general transcription factor IIIC subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C2, Length 3,992 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-202ENST00000359541 STK24Q9Y6E0 443 aa10.38□□□□□ -0.75
GTF3C2-202ENST00000359541 KLRG2A4D1S0 409 aaPredicted RBP10.38□□□□□ -0.75
GTF3C2-202ENST00000359541 ZBTB5O15062 677 aa10.38□□□□□ -0.75
GTF3C2-202ENST00000359541 USO1O60763 962 aaKnown RBP10.38□□□□□ -0.75
GTF3C2-202ENST00000359541 NDUFA10O95299 355 aa10.38□□□□□ -0.75
GTF3C2-202ENST00000359541 KRT18P05783 430 aaKnown RBP10.38□□□□□ -0.75
GTF3C2-202ENST00000359541 FAM193AP78312 1265 aa10.38□□□□□ -0.75
GTF3C2-202ENST00000359541 LRRC63Q05C16 580 aa10.38□□□□□ -0.75
GTF3C2-202ENST00000359541 IQCEQ6IPM2 695 aa10.38□□□□□ -0.75
GTF3C2-202ENST00000359541 TTI2Q6NXR4 508 aa10.38□□□□□ -0.75
GTF3C2-202ENST00000359541 MASTLQ96GX5 879 aa10.38□□□□□ -0.75
GTF3C2-202ENST00000359541 TSGA10Q9BZW7 698 aa10.38□□□□□ -0.75
GTF3C2-202ENST00000359541 ACBD3Q9H3P7 528 aa10.38□□□□□ -0.75
GTF3C2-202ENST00000359541 LUC7LQ9NQ29 371 aaKnown RBP10.38□□□□□ -0.75
GTF3C2-202ENST00000359541 B4DLN1 442 aa10.37□□□□□ -0.75
GTF3C2-202ENST00000359541 SLC26A4O43511 780 aa10.37□□□□□ -0.75
GTF3C2-202ENST00000359541 KLRC4O43908 158 aa10.37□□□□□ -0.75
GTF3C2-202ENST00000359541 SSBP05455 408 aaKnown RBP eCLIP10.37□□□□□ -0.75
GTF3C2-202ENST00000359541 MCM3P25205 808 aa10.37□□□□□ -0.75
GTF3C2-202ENST00000359541 SLC1A4P43007 532 aa10.37□□□□□ -0.75
GTF3C2-202ENST00000359541 NOVP48745 357 aa10.37□□□□□ -0.75
GTF3C2-202ENST00000359541 ZBED6P86452 979 aa10.37□□□□□ -0.75
GTF3C2-202ENST00000359541 SLC35G1Q2M3R5 365 aa10.37□□□□□ -0.75
GTF3C2-202ENST00000359541 PPP4R3AQ6IN85 833 aa10.37□□□□□ -0.75
GTF3C2-202ENST00000359541 CCDC170Q8IYT3 715 aa10.37□□□□□ -0.75
GTF3C2-202ENST00000359541 ERMNQ8TAM6 284 aa10.37□□□□□ -0.75
GTF3C2-202ENST00000359541 ZNF622Q969S3 477 aaKnown RBP eCLIP10.37□□□□□ -0.75
GTF3C2-202ENST00000359541 SRGNP10124 158 aa10.37□□□□□ -0.75
GTF3C2-202ENST00000359541 SCNN1DP51172 638 aa10.37□□□□□ -0.75
GTF3C2-202ENST00000359541 GABPAQ06546 454 aa10.37□□□□□ -0.75
GTF3C2-202ENST00000359541 BRD3Q15059 726 aa10.37□□□□□ -0.75
GTF3C2-202ENST00000359541 DOK7Q18PE1 504 aa10.37□□□□□ -0.75
GTF3C2-202ENST00000359541 COBLL1Q53SF7 1204 aa10.37□□□□□ -0.75
GTF3C2-202ENST00000359541 CCDC65Q8IXS2 484 aa10.37□□□□□ -0.75
GTF3C2-202ENST00000359541 ACRBPQ8NEB7 543 aa10.37□□□□□ -0.75
GTF3C2-202ENST00000359541 TANGO6Q9C0B7 1094 aa10.37□□□□□ -0.75
GTF3C2-202ENST00000359541 EHD4Q9H223 541 aa10.37□□□□□ -0.75
GTF3C2-202ENST00000359541 KANSL2Q9H9L4 492 aa10.37□□□□□ -0.75
GTF3C2-202ENST00000359541 TMEM260Q9NX78 707 aa10.37□□□□□ -0.75
GTF3C2-202ENST00000359541 ADAMTS3O15072 1205 aa10.37□□□□□ -0.75
GTF3C2-202ENST00000359541 SNHG28P0DPA3 235 aa10.37□□□□□ -0.75
GTF3C2-202ENST00000359541 CKAP4Q07065 602 aaKnown RBP10.37□□□□□ -0.75
GTF3C2-202ENST00000359541 CCDC122Q5T0U0 273 aa10.37□□□□□ -0.75
GTF3C2-202ENST00000359541 HAUS3Q68CZ6 603 aa10.37□□□□□ -0.75
GTF3C2-202ENST00000359541 ADGRF4Q8IZF3 695 aa10.37□□□□□ -0.75
GTF3C2-202ENST00000359541 SLC35F6Q8N357 371 aa10.37□□□□□ -0.75
GTF3C2-202ENST00000359541 GUF1Q8N442 669 aaKnown RBP10.37□□□□□ -0.75
GTF3C2-202ENST00000359541 DCAF4Q8WV16 495 aa10.37□□□□□ -0.75
GTF3C2-202ENST00000359541 KIFC2Q96AC6 838 aa10.37□□□□□ -0.75
GTF3C2-202ENST00000359541 GUCA1BQ9UMX6 200 aa10.37□□□□□ -0.75
GTF3C2-202ENST00000359541 PCDHA12Q9UN75 941 aa10.37□□□□□ -0.75
GTF3C2-202ENST00000359541 TAF1LQ8IZX4 1826 aa10.37□□□□□ -0.75
GTF3C2-202ENST00000359541 TTC26A0AVF1 554 aa10.36□□□□□ -0.75
GTF3C2-202ENST00000359541 RAD54LQ92698 747 aa10.36□□□□□ -0.75
GTF3C2-202ENST00000359541 CCDC42Q96M95 316 aa10.36□□□□□ -0.75
GTF3C2-202ENST00000359541 ABCB11O95342 1321 aa10.36□□□□□ -0.75
GTF3C2-202ENST00000359541 EIF3JO75822 258 aaKnown RBP10.36□□□□□ -0.75
GTF3C2-202ENST00000359541 EPS15P42566 896 aa10.36□□□□□ -0.75
GTF3C2-202ENST00000359541 KIF5AQ12840 1032 aa10.36□□□□□ -0.75
GTF3C2-202ENST00000359541 SLFN12Q8IYM2 578 aa10.36□□□□□ -0.75
GTF3C2-202ENST00000359541 DNAJC7Q99615 494 aa10.36□□□□□ -0.75
GTF3C2-202ENST00000359541 JMJD4Q9H9V9 463 aa10.36□□□□□ -0.75
GTF3C2-202ENST00000359541 SLC39A2Q9NP94 309 aa10.36□□□□□ -0.75
GTF3C2-202ENST00000359541 TMOD2Q9NZR1 351 aa10.36□□□□□ -0.75
GTF3C2-202ENST00000359541 PI4KBQ9UBF8 816 aa10.36□□□□□ -0.75
GTF3C2-202ENST00000359541 CRKP46108 304 aa10.36□□□□□ -0.75
GTF3C2-202ENST00000359541 MCM6Q14566 821 aa10.36□□□□□ -0.75
GTF3C2-202ENST00000359541 CERKLQ49MI3 558 aaPredicted RBP10.36□□□□□ -0.75
GTF3C2-202ENST00000359541 DYMQ7RTS9 669 aa10.36□□□□□ -0.75
GTF3C2-202ENST00000359541 CACNA2D4Q7Z3S7 1137 aa10.36□□□□□ -0.75
GTF3C2-202ENST00000359541 TDP2O95551 362 aa10.35□□□□□ -0.75
GTF3C2-202ENST00000359541 ERVK-24P63145 666 aa10.35□□□□□ -0.75
GTF3C2-202ENST00000359541 STK4Q13043 487 aa10.35□□□□□ -0.75
GTF3C2-202ENST00000359541 MAN2A1Q16706 1144 aa10.35□□□□□ -0.75
GTF3C2-202ENST00000359541 CCDC40Q4G0X9 1142 aa10.35□□□□□ -0.75
GTF3C2-202ENST00000359541 CDC42EP5Q6NZY7 148 aa10.35□□□□□ -0.75
GTF3C2-202ENST00000359541 MYOCDQ8IZQ8 938 aa10.35□□□□□ -0.75
GTF3C2-202ENST00000359541 CAGE1Q8TC20 777 aa10.35□□□□□ -0.75
GTF3C2-202ENST00000359541 JAKMIP2Q96AA8 810 aa10.35□□□□□ -0.75
GTF3C2-202ENST00000359541 MTMR9Q96QG7 549 aa10.35□□□□□ -0.75
GTF3C2-202ENST00000359541 PUF60Q9UHX1 559 aaKnown RBP10.35□□□□□ -0.75
GTF3C2-202ENST00000359541 CCDC151A5D8V7 595 aa10.35□□□□□ -0.75
GTF3C2-202ENST00000359541 GNA14O95837 355 aa10.35□□□□□ -0.75
GTF3C2-202ENST00000359541 AP3B2Q13367 1082 aa10.35□□□□□ -0.75
GTF3C2-202ENST00000359541 FIGNQ5HY92 759 aa10.35□□□□□ -0.75
GTF3C2-202ENST00000359541 ANKRD40Q6AI12 368 aa10.35□□□□□ -0.75
GTF3C2-202ENST00000359541 PROM2Q8N271 834 aa10.35□□□□□ -0.75
GTF3C2-202ENST00000359541 RPGRIP1Q96KN7 1286 aa10.35□□□□□ -0.75
GTF3C2-202ENST00000359541 ZSWIM4Q9H7M6 989 aa10.35□□□□□ -0.75
GTF3C2-202ENST00000359541 C10orf71Q711Q0 1435 aa10.35□□□□□ -0.75
GTF3C2-202ENST00000359541 IGKV6D-41A0A0C4DH26 115 aa10.35□□□□□ -0.75
GTF3C2-202ENST00000359541 A0A1W2PQJ5 194 aa10.35□□□□□ -0.75
GTF3C2-202ENST00000359541 SPDYE3A6NKU9 549 aa10.35□□□□□ -0.75
GTF3C2-202ENST00000359541 HDLBPQ00341 1268 aaKnown RBP10.35□□□□□ -0.75
GTF3C2-202ENST00000359541 SLFN13Q68D06 897 aa10.35□□□□□ -0.75
GTF3C2-202ENST00000359541 NUCKS1Q9H1E3 243 aaKnown RBP10.35□□□□□ -0.75
GTF3C2-202ENST00000359541 MYO6Q9UM54 1294 aa10.35□□□□□ -0.75
GTF3C2-202ENST00000359541 GRB10Q13322 594 aa10.34□□□□□ -0.75
GTF3C2-202ENST00000359541 KCTD1Q719H9 257 aa10.34□□□□□ -0.75
GTF3C2-202ENST00000359541 NEK11Q8NG66 645 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms