RNA–Protein interactions for RNA: ENST00000358519.8

CNGA1-201, Transcript of cyclic nucleotide gated channel alpha 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNGA1, Length 2,627 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1-201ENST00000358519 CCDC12Q8WUD4 166 aaPredicted RBP4.48□□□□□ -1.69
CNGA1-201ENST00000358519 THOC1Q96FV9 657 aaKnown RBP4.48□□□□□ -1.69
CNGA1-201ENST00000358519 NLRP3Q96P20 1036 aa4.48□□□□□ -1.69
CNGA1-201ENST00000358519 RHOXF2Q9BQY4 288 aa4.48□□□□□ -1.69
CNGA1-201ENST00000358519 LSG1Q9H089 658 aaKnown RBP4.48□□□□□ -1.69
CNGA1-201ENST00000358519 NUCKS1Q9H1E3 243 aaKnown RBP4.48□□□□□ -1.69
CNGA1-201ENST00000358519 RABEP2Q9H5N1 569 aa4.48□□□□□ -1.69
CNGA1-201ENST00000358519 KAT14Q9H8E8 782 aa4.48□□□□□ -1.69
CNGA1-201ENST00000358519 PAG1Q9NWQ8 432 aa4.48□□□□□ -1.69
CNGA1-201ENST00000358519 CPSF2Q9P2I0 782 aaKnown RBP4.48□□□□□ -1.69
CNGA1-201ENST00000358519 ASAP1Q9ULH1 1129 aa4.48□□□□□ -1.69
CNGA1-201ENST00000358519 TPCN1Q9ULQ1 816 aa4.48□□□□□ -1.69
CNGA1-201ENST00000358519 ROBO3Q96MS0 1386 aa4.48□□□□□ -1.69
CNGA1-201ENST00000358519 SHTN1A0MZ66 631 aa4.47□□□□□ -1.69
CNGA1-201ENST00000358519 GOLGA6L9A6NEM1 432 aa4.47□□□□□ -1.69
CNGA1-201ENST00000358519 SLC26A4O43511 780 aa4.47□□□□□ -1.69
CNGA1-201ENST00000358519 AP1G2O75843 785 aa4.47□□□□□ -1.69
CNGA1-201ENST00000358519 FSBPO95073 299 aa4.47□□□□□ -1.69
CNGA1-201ENST00000358519 MYL6BP14649 208 aa4.47□□□□□ -1.69
CNGA1-201ENST00000358519 SMARCA1P28370 1054 aa4.47□□□□□ -1.69
CNGA1-201ENST00000358519 GCKP35557 465 aa4.47□□□□□ -1.69
CNGA1-201ENST00000358519 PDE6BP35913 854 aa4.47□□□□□ -1.69
CNGA1-201ENST00000358519 AARSP49588 968 aaKnown RBP eCLIP4.47□□□□□ -1.69
CNGA1-201ENST00000358519 CLNS1AP54105 237 aaKnown RBP4.47□□□□□ -1.69
CNGA1-201ENST00000358519 CEBPZQ03701 1054 aaKnown RBP4.47□□□□□ -1.69
CNGA1-201ENST00000358519 ACTN3Q08043 901 aaPredicted RBP4.47□□□□□ -1.69
CNGA1-201ENST00000358519 GOLGA8FQ08AF8 430 aa4.47□□□□□ -1.69
CNGA1-201ENST00000358519 GOLGA8DPQ0D2H9 430 aa4.47□□□□□ -1.69
CNGA1-201ENST00000358519 MAP3K12Q12852 859 aa4.47□□□□□ -1.69
CNGA1-201ENST00000358519 ITPK1Q13572 414 aa4.47□□□□□ -1.69
CNGA1-201ENST00000358519 NECTIN1Q15223 517 aa4.47□□□□□ -1.69
CNGA1-201ENST00000358519 CAVIN4Q5BKX8 364 aa4.47□□□□□ -1.69
CNGA1-201ENST00000358519 TTC39AQ5SRH9 613 aa4.47□□□□□ -1.69
CNGA1-201ENST00000358519 SH3RF1Q7Z6J0 888 aa4.47□□□□□ -1.69
CNGA1-201ENST00000358519 ZNF513Q8N8E2 541 aaPredicted RBP4.47□□□□□ -1.69
CNGA1-201ENST00000358519 CEP112Q8N8E3 955 aa4.47□□□□□ -1.69
CNGA1-201ENST00000358519 BAP1Q92560 729 aa4.47□□□□□ -1.69
CNGA1-201ENST00000358519 ZNF274Q96GC6 653 aaPredicted RBP4.47□□□□□ -1.69
CNGA1-201ENST00000358519 TMEM87BQ96K49 555 aa4.47□□□□□ -1.69
CNGA1-201ENST00000358519 JAKMIP1Q96N16 626 aaKnown RBP4.47□□□□□ -1.69
CNGA1-201ENST00000358519 SETDB2Q96T68 719 aa4.47□□□□□ -1.69
CNGA1-201ENST00000358519 EHD4Q9H223 541 aa4.47□□□□□ -1.69
CNGA1-201ENST00000358519 TAOK3Q9H2K8 898 aa4.47□□□□□ -1.69
CNGA1-201ENST00000358519 GOLPH3LQ9H4A5 285 aa4.47□□□□□ -1.69
CNGA1-201ENST00000358519 KIF9Q9HAQ2 790 aa4.47□□□□□ -1.69
CNGA1-201ENST00000358519 KLC4Q9NSK0 619 aa4.47□□□□□ -1.69
CNGA1-201ENST00000358519 TRMT112Q9UI30 125 aaKnown RBP4.47□□□□□ -1.69
CNGA1-201ENST00000358519 SAMM50Q9Y512 469 aa4.47□□□□□ -1.69
CNGA1-201ENST00000358519 CYP46A1Q9Y6A2 500 aa4.47□□□□□ -1.69
CNGA1-201ENST00000358519 RPS6KL1Q9Y6S9 549 aa4.47□□□□□ -1.69
CNGA1-201ENST00000358519 CACNA1SQ13698 1873 aa4.47□□□□□ -1.69
CNGA1-201ENST00000358519 COL1A1P02452 1464 aaPredicted RBP4.47□□□□□ -1.69
CNGA1-201ENST00000358519 ARHGAP6O43182 974 aa4.47□□□□□ -1.69
CNGA1-201ENST00000358519 KINO60870 393 aaKnown RBP4.47□□□□□ -1.69
CNGA1-201ENST00000358519 CDKL5O76039 1030 aa4.47□□□□□ -1.69
CNGA1-201ENST00000358519 SLC3A2P08195 630 aaKnown RBP4.47□□□□□ -1.69
CNGA1-201ENST00000358519 CALM1P0DP23 149 aa4.47□□□□□ -1.69
CNGA1-201ENST00000358519 CALM2P0DP24 149 aa4.47□□□□□ -1.69
CNGA1-201ENST00000358519 CALM3P0DP25 149 aa4.47□□□□□ -1.69
CNGA1-201ENST00000358519 BCRP11274 1271 aa4.47□□□□□ -1.69
CNGA1-201ENST00000358519 TM4SF1P30408 202 aa4.47□□□□□ -1.69
CNGA1-201ENST00000358519 RWDD2BP57060 319 aa4.47□□□□□ -1.69
CNGA1-201ENST00000358519 ICA1Q05084 483 aa4.47□□□□□ -1.69
CNGA1-201ENST00000358519 TRAF1Q13077 416 aa4.47□□□□□ -1.69
CNGA1-201ENST00000358519 CWF19L2Q2TBE0 894 aaKnown RBP4.47□□□□□ -1.69
CNGA1-201ENST00000358519 DPCR1Q3MIW9 517 aa4.47□□□□□ -1.69
CNGA1-201ENST00000358519 RCSD1Q6JBY9 416 aa4.47□□□□□ -1.69
CNGA1-201ENST00000358519 CYP4F22Q6NT55 531 aa4.47□□□□□ -1.69
CNGA1-201ENST00000358519 CEP57Q86XR8 500 aa4.47□□□□□ -1.69
CNGA1-201ENST00000358519 NUTM1Q86Y26 1132 aa4.47□□□□□ -1.69
CNGA1-201ENST00000358519 C2CD5Q86YS7 1000 aa4.47□□□□□ -1.69
CNGA1-201ENST00000358519 SLC17A8Q8NDX2 589 aa4.47□□□□□ -1.69
CNGA1-201ENST00000358519 WDR66Q8TBY9 1149 aa4.47□□□□□ -1.69
CNGA1-201ENST00000358519 RIN2Q8WYP3 895 aaPredicted RBP4.47□□□□□ -1.69
CNGA1-201ENST00000358519 WASF1Q92558 559 aa4.47□□□□□ -1.69
CNGA1-201ENST00000358519 EYA3Q99504 573 aa4.47□□□□□ -1.69
CNGA1-201ENST00000358519 BRIP1Q9BX63 1249 aa4.47□□□□□ -1.69
CNGA1-201ENST00000358519 NACAP1Q9BZK3 213 aa4.47□□□□□ -1.69
CNGA1-201ENST00000358519 KRT23Q9C075 422 aa4.47□□□□□ -1.69
CNGA1-201ENST00000358519 GBP3Q9H0R5 595 aa4.47□□□□□ -1.69
CNGA1-201ENST00000358519 DDX20Q9UHI6 824 aaKnown RBP4.47□□□□□ -1.69
CNGA1-201ENST00000358519 CFAP45Q9UL16 551 aa4.47□□□□□ -1.69
CNGA1-201ENST00000358519 ZBTB1Q9Y2K1 713 aa4.47□□□□□ -1.69
CNGA1-201ENST00000358519 STK36Q9NRP7 1315 aa4.47□□□□□ -1.69
CNGA1-201ENST00000358519 LTBP3Q9NS15 1303 aa4.47□□□□□ -1.69
CNGA1-201ENST00000358519 SCN4AP35499 1836 aa4.47□□□□□ -1.69
CNGA1-201ENST00000358519 NFKBIEO00221 500 aa4.46□□□□□ -1.69
CNGA1-201ENST00000358519 KIAA0754O94854 1291 aa4.46□□□□□ -1.69
CNGA1-201ENST00000358519 ZNF202O95125 648 aa4.46□□□□□ -1.69
CNGA1-201ENST00000358519 A1BGP04217 495 aa4.46□□□□□ -1.69
CNGA1-201ENST00000358519 LMOD1P29536 600 aaPredicted RBP4.46□□□□□ -1.69
CNGA1-201ENST00000358519 EPHX2P34913 555 aa4.46□□□□□ -1.69
CNGA1-201ENST00000358519 TUBB4BP68371 445 aa4.46□□□□□ -1.69
CNGA1-201ENST00000358519 FANCCQ00597 558 aa4.46□□□□□ -1.69
CNGA1-201ENST00000358519 ORC2Q13416 577 aaPredicted RBP4.46□□□□□ -1.69
CNGA1-201ENST00000358519 GRAPQ13588 217 aa4.46□□□□□ -1.69
CNGA1-201ENST00000358519 SNX1Q13596 522 aa4.46□□□□□ -1.69
CNGA1-201ENST00000358519 HIC1Q14526 733 aa4.46□□□□□ -1.69
CNGA1-201ENST00000358519 NAA25Q14CX7 972 aa4.46□□□□□ -1.69
CNGA1-201ENST00000358519 SBK1Q52WX2 424 aa4.46□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms