RNA–Protein interactions for RNA: ENST00000358511.10

COL6A6-201, Transcript of collagen type VI alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL6A6, Length 9,581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-201ENST00000358511 C6orf229H3BNL8 230 aa9.52□□□□□ -0.89
COL6A6-201ENST00000358511 ARHGAP44Q17R89 818 aa9.52□□□□□ -0.89
COL6A6-201ENST00000358511 XAGE2Q96GT9 111 aa9.52□□□□□ -0.89
COL6A6-201ENST00000358511 IWS1Q96ST2 819 aa9.52□□□□□ -0.89
COL6A6-201ENST00000358511 PITPNM3Q9BZ71 974 aa9.52□□□□□ -0.89
COL6A6-201ENST00000358511 ANKRD2Q9GZV1 360 aa9.52□□□□□ -0.89
COL6A6-201ENST00000358511 KDRP35968 1356 aa9.52□□□□□ -0.89
COL6A6-201ENST00000358511 EIF3HO15372 352 aaKnown RBP eCLIP9.52□□□□□ -0.89
COL6A6-201ENST00000358511 SLCO1A2P46721 670 aa9.52□□□□□ -0.89
COL6A6-201ENST00000358511 CORO7P57737 925 aa9.52□□□□□ -0.89
COL6A6-201ENST00000358511 EXOC3L4Q17RC7 722 aa9.52□□□□□ -0.89
COL6A6-201ENST00000358511 GALNT17Q6IS24 598 aa9.52□□□□□ -0.89
COL6A6-201ENST00000358511 RSBN1LQ6PCB5 846 aaPredicted RBP9.52□□□□□ -0.89
COL6A6-201ENST00000358511 UHMK1Q8TAS1 419 aaKnown RBP9.52□□□□□ -0.89
COL6A6-201ENST00000358511 PCDHA13Q9Y5I0 950 aa9.52□□□□□ -0.89
COL6A6-201ENST00000358511 KIF11P52732 1056 aa9.51□□□□□ -0.89
COL6A6-201ENST00000358511 CRYMQ14894 314 aa9.51□□□□□ -0.89
COL6A6-201ENST00000358511 OTUD6AQ7L8S5 288 aa9.51□□□□□ -0.89
COL6A6-201ENST00000358511 NUDCD1Q96RS6 583 aa9.51□□□□□ -0.89
COL6A6-201ENST00000358511 ABHD10Q9NUJ1 306 aa9.51□□□□□ -0.89
COL6A6-201ENST00000358511 HAUS2Q9NVX0 235 aa9.51□□□□□ -0.89
COL6A6-201ENST00000358511 USP19O94966 1318 aa9.51□□□□□ -0.89
COL6A6-201ENST00000358511 CDC42BPAQ5VT25 1732 aa9.51□□□□□ -0.89
COL6A6-201ENST00000358511 PDIA3P30101 505 aaKnown RBP9.51□□□□□ -0.89
COL6A6-201ENST00000358511 PTGDRQ13258 359 aa9.51□□□□□ -0.89
COL6A6-201ENST00000358511 NAA35Q5VZE5 725 aa9.51□□□□□ -0.89
COL6A6-201ENST00000358511 TRIML2Q8N7C3 387 aa9.51□□□□□ -0.89
COL6A6-201ENST00000358511 ELAC2Q9BQ52 826 aaKnown RBP9.51□□□□□ -0.89
COL6A6-201ENST00000358511 DAPK3O43293 454 aa9.51□□□□□ -0.89
COL6A6-201ENST00000358511 MOCS3O95396 460 aa9.51□□□□□ -0.89
COL6A6-201ENST00000358511 ZNF658Q5TYW1 1059 aaPredicted RBP9.51□□□□□ -0.89
COL6A6-201ENST00000358511 JADE1Q6IE81 842 aa9.51□□□□□ -0.89
COL6A6-201ENST00000358511 ZNF654Q8IZM8 581 aa9.51□□□□□ -0.89
COL6A6-201ENST00000358511 DACT3Q96B18 629 aaPredicted RBP9.51□□□□□ -0.89
COL6A6-201ENST00000358511 TBK1Q9UHD2 729 aa9.51□□□□□ -0.89
COL6A6-201ENST00000358511 PLCH2O75038 1416 aa9.51□□□□□ -0.89
COL6A6-201ENST00000358511 GNL1P36915 607 aaPredicted RBP9.51□□□□□ -0.89
COL6A6-201ENST00000358511 ARID5BQ14865 1188 aa9.51□□□□□ -0.89
COL6A6-201ENST00000358511 SGO2Q562F6 1265 aa9.51□□□□□ -0.89
COL6A6-201ENST00000358511 CDKL2Q92772 493 aa9.51□□□□□ -0.89
COL6A6-201ENST00000358511 BAG5Q9UL15 447 aa9.51□□□□□ -0.89
COL6A6-201ENST00000358511 CCDC188H7C350 402 aa9.51□□□□□ -0.89
COL6A6-201ENST00000358511 STAM2O75886 525 aa9.51□□□□□ -0.89
COL6A6-201ENST00000358511 LDHBP07195 334 aaKnown RBP9.51□□□□□ -0.89
COL6A6-201ENST00000358511 HOXA7P31268 230 aaPredicted RBP9.51□□□□□ -0.89
COL6A6-201ENST00000358511 HDLBPQ00341 1268 aaKnown RBP9.51□□□□□ -0.89
COL6A6-201ENST00000358511 KLC1Q07866 573 aa9.51□□□□□ -0.89
COL6A6-201ENST00000358511 SPARCL1Q14515 664 aa9.51□□□□□ -0.89
COL6A6-201ENST00000358511 CAPN12Q6ZSI9 719 aa9.51□□□□□ -0.89
COL6A6-201ENST00000358511 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.51□□□□□ -0.89
COL6A6-201ENST00000358511 SIRT1Q96EB6 747 aa9.51□□□□□ -0.89
COL6A6-201ENST00000358511 ST7Q9NRC1 585 aa9.51□□□□□ -0.89
COL6A6-201ENST00000358511 MAGOHP61326 146 aaKnown RBP9.51□□□□□ -0.89
COL6A6-201ENST00000358511 GPBP1Q86WP2 473 aa9.51□□□□□ -0.89
COL6A6-201ENST00000358511 NELFCDQ8IXH7 590 aa9.51□□□□□ -0.89
COL6A6-201ENST00000358511 LINC00301Q8NCQ3 95 aa9.51□□□□□ -0.89
COL6A6-201ENST00000358511 ZNF521Q96K83 1311 aa9.51□□□□□ -0.89
COL6A6-201ENST00000358511 OSBPL9Q96SU4 736 aa9.51□□□□□ -0.89
COL6A6-201ENST00000358511 NDE1Q9NXR1 346 aa9.51□□□□□ -0.89
COL6A6-201ENST00000358511 SYNGAP1Q96PV0 1343 aa9.51□□□□□ -0.89
COL6A6-201ENST00000358511 ANO9A1A5B4 782 aa9.51□□□□□ -0.89
COL6A6-201ENST00000358511 TRAPPC10P48553 1259 aa9.51□□□□□ -0.89
COL6A6-201ENST00000358511 ADCK5Q3MIX3 580 aa9.51□□□□□ -0.89
COL6A6-201ENST00000358511 NBPF5PQ86XG9 351 aaPredicted RBP9.51□□□□□ -0.89
COL6A6-201ENST00000358511 ICA1LQ8NDH6 482 aa9.51□□□□□ -0.89
COL6A6-201ENST00000358511 ECT2Q9H8V3 914 aa9.51□□□□□ -0.89
COL6A6-201ENST00000358511 PANK4Q9NVE7 773 aa9.51□□□□□ -0.89
COL6A6-201ENST00000358511 CHMP2AO43633 222 aa9.5□□□□□ -0.89
COL6A6-201ENST00000358511 CYB5RLQ6IPT4 315 aa9.5□□□□□ -0.89
COL6A6-201ENST00000358511 MAP4K1Q92918 833 aa9.5□□□□□ -0.89
COL6A6-201ENST00000358511 CHMP6Q96FZ7 201 aa9.5□□□□□ -0.89
COL6A6-201ENST00000358511 CEP170Q5SW79 1584 aa9.5□□□□□ -0.89
COL6A6-201ENST00000358511 ECM2O94769 699 aaPredicted RBP9.5□□□□□ -0.89
COL6A6-201ENST00000358511 SNX1Q13596 522 aa9.5□□□□□ -0.89
COL6A6-201ENST00000358511 LCA5Q86VQ0 697 aa9.5□□□□□ -0.89
COL6A6-201ENST00000358511 CCDC125Q86Z20 511 aa9.5□□□□□ -0.89
COL6A6-201ENST00000358511 HAUS7Q99871 368 aa9.5□□□□□ -0.89
COL6A6-201ENST00000358511 ARMT1Q9H993 441 aa9.5□□□□□ -0.89
COL6A6-201ENST00000358511 ZFP69BQ9UJL9 534 aa9.5□□□□□ -0.89
COL6A6-201ENST00000358511 ZBTB21Q9ULJ3 1066 aa9.5□□□□□ -0.89
COL6A6-201ENST00000358511 THAP9Q9H5L6 903 aa9.5□□□□□ -0.89
COL6A6-201ENST00000358511 ARHGEF5Q12774 1597 aa9.5□□□□□ -0.89
COL6A6-201ENST00000358511 PTCH1Q13635 1447 aa9.5□□□□□ -0.89
COL6A6-201ENST00000358511 ATICP31939 592 aa9.5□□□□□ -0.89
COL6A6-201ENST00000358511 MAN2A1Q16706 1144 aa9.5□□□□□ -0.89
COL6A6-201ENST00000358511 ATG16L1Q676U5 607 aa9.5□□□□□ -0.89
COL6A6-201ENST00000358511 ANKRD13CQ8N6S4 541 aa9.5□□□□□ -0.89
COL6A6-201ENST00000358511 CCDC138Q96M89 665 aa9.5□□□□□ -0.89
COL6A6-201ENST00000358511 CYTH2Q99418 400 aa9.5□□□□□ -0.89
COL6A6-201ENST00000358511 FAM167BQ9BTA0 163 aa9.5□□□□□ -0.89
COL6A6-201ENST00000358511 ENO4A6NNW6 628 aa9.5□□□□□ -0.89
COL6A6-201ENST00000358511 GARSP41250 739 aaKnown RBP9.5□□□□□ -0.89
COL6A6-201ENST00000358511 CUL4BQ13620 913 aa9.5□□□□□ -0.89
COL6A6-201ENST00000358511 PPP2R5DQ14738 602 aa9.5□□□□□ -0.89
COL6A6-201ENST00000358511 CD109Q6YHK3 1445 aa9.5□□□□□ -0.89
COL6A6-201ENST00000358511 ADAMTS12P58397 1594 aa9.5□□□□□ -0.89
COL6A6-201ENST00000358511 SERPING1P05155 500 aa9.5□□□□□ -0.89
COL6A6-201ENST00000358511 ATP1A3P13637 1013 aa9.5□□□□□ -0.89
COL6A6-201ENST00000358511 PICALMQ13492 652 aa9.5□□□□□ -0.89
COL6A6-201ENST00000358511 KRT81Q14533 505 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms