RNA–Protein interactions for RNA: ENST00000358392.6

COL11A1-202, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL11A1, Length 7,327 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-202ENST00000358392 GRAMD4Q6IC98 578 aa12.14□□□□□ -0.47
COL11A1-202ENST00000358392 C14orf93Q9H972 538 aaKnown RBP12.14□□□□□ -0.47
COL11A1-202ENST00000358392 IBTKQ9P2D0 1353 aaPredicted RBP12.14□□□□□ -0.47
COL11A1-202ENST00000358392 DARS2Q6PI48 645 aaKnown RBP12.14□□□□□ -0.47
COL11A1-202ENST00000358392 NR1H4Q96RI1 486 aaPredicted RBP12.14□□□□□ -0.47
COL11A1-202ENST00000358392 HLA-DPA1P20036 260 aa12.14□□□□□ -0.47
COL11A1-202ENST00000358392 PMS1P54277 932 aaKnown RBP12.14□□□□□ -0.47
COL11A1-202ENST00000358392 THOC5Q13769 683 aaKnown RBP12.14□□□□□ -0.47
COL11A1-202ENST00000358392 TRIML2Q8N7C3 387 aa12.14□□□□□ -0.47
COL11A1-202ENST00000358392 LZTS2Q9BRK4 669 aa12.14□□□□□ -0.47
COL11A1-202ENST00000358392 TRAIPQ9BWF2 469 aa12.14□□□□□ -0.47
COL11A1-202ENST00000358392 PCIF1Q9H4Z3 704 aa12.14□□□□□ -0.47
COL11A1-202ENST00000358392 USP40Q9NVE5 1235 aa12.14□□□□□ -0.47
COL11A1-202ENST00000358392 SEPT9Q9UHD8 586 aaPredicted RBP12.14□□□□□ -0.47
COL11A1-202ENST00000358392 GTPBP10A4D1E9 387 aaKnown RBP12.14□□□□□ -0.47
COL11A1-202ENST00000358392 ZC3H18Q86VM9 953 aaKnown RBP12.14□□□□□ -0.47
COL11A1-202ENST00000358392 PLBD2Q8NHP8 589 aa12.14□□□□□ -0.47
COL11A1-202ENST00000358392 GOLGA8CPA6NN73 597 aa12.14□□□□□ -0.47
COL11A1-202ENST00000358392 TCP10L2B9ZVM9 353 aa12.14□□□□□ -0.47
COL11A1-202ENST00000358392 HEXIM1O94992 359 aaKnown RBP12.14□□□□□ -0.47
COL11A1-202ENST00000358392 GPT2Q8TD30 523 aa12.14□□□□□ -0.47
COL11A1-202ENST00000358392 AP1M1Q9BXS5 423 aa12.14□□□□□ -0.47
COL11A1-202ENST00000358392 SLC38A10Q9HBR0 1119 aa12.14□□□□□ -0.47
COL11A1-202ENST00000358392 KRT1P04264 644 aa12.14□□□□□ -0.47
COL11A1-202ENST00000358392 GUCY2CP25092 1073 aa12.14□□□□□ -0.47
COL11A1-202ENST00000358392 SOX5P35711 763 aa12.14□□□□□ -0.47
COL11A1-202ENST00000358392 ARPP19P56211 112 aa12.14□□□□□ -0.47
COL11A1-202ENST00000358392 PKP1Q13835 747 aa12.14□□□□□ -0.47
COL11A1-202ENST00000358392 TRIM67Q6ZTA4 783 aa12.14□□□□□ -0.47
COL11A1-202ENST00000358392 KRT27Q7Z3Y8 459 aa12.14□□□□□ -0.47
COL11A1-202ENST00000358392 KCTD6Q8NC69 237 aa12.14□□□□□ -0.47
COL11A1-202ENST00000358392 SPC25Q9HBM1 224 aa12.14□□□□□ -0.47
COL11A1-202ENST00000358392 COPB1P53618 953 aaKnown RBP12.13□□□□□ -0.47
COL11A1-202ENST00000358392 GYS2P54840 703 aa12.13□□□□□ -0.47
COL11A1-202ENST00000358392 FLOT2Q14254 428 aa12.13□□□□□ -0.47
COL11A1-202ENST00000358392 EFCAB13Q8IY85 973 aa12.13□□□□□ -0.47
COL11A1-202ENST00000358392 BBOF1Q8ND07 529 aa12.13□□□□□ -0.47
COL11A1-202ENST00000358392 KCNV2Q8TDN2 545 aa12.13□□□□□ -0.47
COL11A1-202ENST00000358392 ZSCAN10Q96SZ4 725 aaPredicted RBP12.13□□□□□ -0.47
COL11A1-202ENST00000358392 TEKT2Q9UIF3 430 aa12.13□□□□□ -0.47
COL11A1-202ENST00000358392 GOLGA8QA0A0J9YX86 632 aa12.13□□□□□ -0.47
COL11A1-202ENST00000358392 GOLGA8OA6NCC3 632 aa12.13□□□□□ -0.47
COL11A1-202ENST00000358392 GOLGA8NF8WBI6 632 aa12.13□□□□□ -0.47
COL11A1-202ENST00000358392 H2AFZP0C0S5 128 aa12.13□□□□□ -0.47
COL11A1-202ENST00000358392 LRRC41Q15345 812 aa12.13□□□□□ -0.47
COL11A1-202ENST00000358392 H2AFVQ71UI9 128 aa12.13□□□□□ -0.47
COL11A1-202ENST00000358392 NOSTRINQ8IVI9 506 aa12.13□□□□□ -0.47
COL11A1-202ENST00000358392 NRBF2Q96F24 287 aa12.13□□□□□ -0.47
COL11A1-202ENST00000358392 TESK2Q96S53 571 aa12.13□□□□□ -0.47
COL11A1-202ENST00000358392 CENPKQ9BS16 269 aa12.13□□□□□ -0.47
COL11A1-202ENST00000358392 TLR3O15455 904 aaKnown RBP12.13□□□□□ -0.47
COL11A1-202ENST00000358392 BNIP3LO60238 219 aa12.13□□□□□ -0.47
COL11A1-202ENST00000358392 A1BGP04217 495 aa12.13□□□□□ -0.47
COL11A1-202ENST00000358392 GSPT1P15170 499 aaKnown RBP12.13□□□□□ -0.47
COL11A1-202ENST00000358392 LONP1P36776 959 aaKnown RBP12.13□□□□□ -0.47
COL11A1-202ENST00000358392 NSUN2Q08J23 767 aaKnown RBP eCLIP12.13□□□□□ -0.47
COL11A1-202ENST00000358392 NCAPG2Q86XI2 1143 aa12.13□□□□□ -0.47
COL11A1-202ENST00000358392 KBTBD3Q8NAB2 608 aa12.13□□□□□ -0.47
COL11A1-202ENST00000358392 EYA1Q99502 592 aa12.13□□□□□ -0.47
COL11A1-202ENST00000358392 ZBTB12Q9Y330 459 aaPredicted RBP12.13□□□□□ -0.47
COL11A1-202ENST00000358392 CD109Q6YHK3 1445 aa12.13□□□□□ -0.47
COL11A1-202ENST00000358392 H0Y3Z8 333 aa12.13□□□□□ -0.47
COL11A1-202ENST00000358392 CLIC2O15247 247 aa12.13□□□□□ -0.47
COL11A1-202ENST00000358392 NCLNQ969V3 563 aa12.13□□□□□ -0.47
COL11A1-202ENST00000358392 ADPGKQ9BRR6 497 aa12.13□□□□□ -0.47
COL11A1-202ENST00000358392 ANGPTL2Q9UKU9 493 aa12.13□□□□□ -0.47
COL11A1-202ENST00000358392 NOVA2Q9UNW9 492 aaKnown RBP12.13□□□□□ -0.47
COL11A1-202ENST00000358392 SRGAP2BP0DMP2 458 aa12.13□□□□□ -0.47
COL11A1-202ENST00000358392 MCF2P10911 925 aa12.13□□□□□ -0.47
COL11A1-202ENST00000358392 FBXW4P57775 412 aa12.13□□□□□ -0.47
COL11A1-202ENST00000358392 DMTNQ08495 405 aa12.13□□□□□ -0.47
COL11A1-202ENST00000358392 ATG16L1Q676U5 607 aa12.13□□□□□ -0.47
COL11A1-202ENST00000358392 TTLL11Q8NHH1 800 aa12.13□□□□□ -0.47
COL11A1-202ENST00000358392 EFHD1Q9BUP0 239 aa12.13□□□□□ -0.47
COL11A1-202ENST00000358392 SPZ1Q9BXG8 430 aa12.13□□□□□ -0.47
COL11A1-202ENST00000358392 YY1AP1Q9H869 796 aa12.13□□□□□ -0.47
COL11A1-202ENST00000358392 RTEL1Q9NZ71 1219 aa12.13□□□□□ -0.47
COL11A1-202ENST00000358392 NNTQ13423 1086 aa12.13□□□□□ -0.47
COL11A1-202ENST00000358392 PI4K2BQ8TCG2 481 aa12.13□□□□□ -0.47
COL11A1-202ENST00000358392 STRIP2Q9ULQ0 834 aa12.13□□□□□ -0.47
COL11A1-202ENST00000358392 DNAJC6O75061 913 aa12.12□□□□□ -0.47
COL11A1-202ENST00000358392 N4BP1O75113 896 aaKnown RBP12.12□□□□□ -0.47
COL11A1-202ENST00000358392 TADA3O75528 432 aa12.12□□□□□ -0.47
COL11A1-202ENST00000358392 MT-ND3P03897 115 aa12.12□□□□□ -0.47
COL11A1-202ENST00000358392 OR52Z1P0C646 297 aa12.12□□□□□ -0.47
COL11A1-202ENST00000358392 SCNN1DP51172 638 aa12.12□□□□□ -0.47
COL11A1-202ENST00000358392 OCRLQ01968 901 aa12.12□□□□□ -0.47
COL11A1-202ENST00000358392 TSR3Q9UJK0 312 aaKnown RBP12.12□□□□□ -0.47
COL11A1-202ENST00000358392 TRPC5Q9UL62 973 aaPredicted RBP12.12□□□□□ -0.47
COL11A1-202ENST00000358392 DAAM1Q9Y4D1 1078 aa12.12□□□□□ -0.47
COL11A1-202ENST00000358392 PCDH11XQ9BZA7 1347 aa12.12□□□□□ -0.47
COL11A1-202ENST00000358392 PCDH11YQ9BZA8 1340 aa12.12□□□□□ -0.47
COL11A1-202ENST00000358392 SOWAHDA6NJG2 315 aa12.12□□□□□ -0.47
COL11A1-202ENST00000358392 GLE1Q53GS7 698 aaKnown RBP12.12□□□□□ -0.47
COL11A1-202ENST00000358392 TLK1Q9UKI8 766 aa12.12□□□□□ -0.47
COL11A1-202ENST00000358392 PACSIN2Q9UNF0 486 aaPredicted RBP12.12□□□□□ -0.47
COL11A1-202ENST00000358392 PTH1RQ03431 593 aa12.12□□□□□ -0.47
COL11A1-202ENST00000358392 PCGF5Q86SE9 256 aa12.12□□□□□ -0.47
COL11A1-202ENST00000358392 CADPS2Q86UW7 1296 aa12.12□□□□□ -0.47
COL11A1-202ENST00000358392 SULF1Q8IWU6 871 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms