RNA–Protein interactions for RNA: ENST00000357980.8

TPM1-205, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-205ENST00000357980 RIPK3Q9Y572 518 aa19.32■□□□□ 0.68
TPM1-205ENST00000357980 CELF2O95319 508 aaKnown RBP19.32■□□□□ 0.68
TPM1-205ENST00000357980 ITGBL1O95965 494 aaPredicted RBP19.32■□□□□ 0.68
TPM1-205ENST00000357980 SNRNP48Q6IEG0 339 aaKnown RBP19.32■□□□□ 0.68
TPM1-205ENST00000357980 KRBA2Q6ZNG9 492 aa19.32■□□□□ 0.68
TPM1-205ENST00000357980 TRERF1Q96PN7 1200 aa19.32■□□□□ 0.68
TPM1-205ENST00000357980 TEX13BQ9BXU2 312 aa19.32■□□□□ 0.68
TPM1-205ENST00000357980 TSPY26PQ9H489 355 aa19.32■□□□□ 0.68
TPM1-205ENST00000357980 MAP3K20Q9NYL2 800 aaKnown RBP19.32■□□□□ 0.68
TPM1-205ENST00000357980 COL20A1Q9P218 1284 aa19.32■□□□□ 0.68
TPM1-205ENST00000357980 ACTN4O43707 911 aaKnown RBP19.31■□□□□ 0.68
TPM1-205ENST00000357980 LBX2Q6XYB7 198 aa19.31■□□□□ 0.68
TPM1-205ENST00000357980 ELOA2Q8IYF1 753 aaPredicted RBP19.31■□□□□ 0.68
TPM1-205ENST00000357980 IGSF22Q8N9C0 903 aa19.31■□□□□ 0.68
TPM1-205ENST00000357980 HAS1Q92839 578 aa19.31■□□□□ 0.68
TPM1-205ENST00000357980 LENG9Q96B70 501 aa19.31■□□□□ 0.68
TPM1-205ENST00000357980 AK8Q96MA6 479 aa19.31■□□□□ 0.68
TPM1-205ENST00000357980 KCNMB3Q9NPA1 279 aa19.31■□□□□ 0.68
TPM1-205ENST00000357980 RPTORQ8N122 1335 aa19.31■□□□□ 0.68
TPM1-205ENST00000357980 FAM86B1E9PN63 330 aa19.3■□□□□ 0.68
TPM1-205ENST00000357980 FAM86B2P0C5J1 330 aa19.3■□□□□ 0.68
TPM1-205ENST00000357980 FXR2P51116 673 aaKnown RBP eCLIP19.3■□□□□ 0.68
TPM1-205ENST00000357980 SNAPC2Q13487 334 aa19.3■□□□□ 0.68
TPM1-205ENST00000357980 Q4G0T1 1027 aa19.3■□□□□ 0.68
TPM1-205ENST00000357980 FASTKD5Q7L8L6 764 aaKnown RBP19.3■□□□□ 0.68
TPM1-205ENST00000357980 PDILTQ8N807 584 aa19.3■□□□□ 0.68
TPM1-205ENST00000357980 RNF146Q9NTX7 359 aa19.3■□□□□ 0.68
TPM1-205ENST00000357980 PP2D1A8MPX8 630 aa19.3■□□□□ 0.68
TPM1-205ENST00000357980 CCDC192P0DO97 292 aa19.3■□□□□ 0.68
TPM1-205ENST00000357980 CST9Q5W186 159 aa19.3■□□□□ 0.68
TPM1-205ENST00000357980 GPAT2Q6NUI2 795 aa19.3■□□□□ 0.68
TPM1-205ENST00000357980 CHADLQ6NUI6 762 aa19.3■□□□□ 0.68
TPM1-205ENST00000357980 MB21D1Q8N884 522 aa19.3■□□□□ 0.68
TPM1-205ENST00000357980 C2orf69Q8N8R5 385 aa19.3■□□□□ 0.68
TPM1-205ENST00000357980 PANK2Q9BZ23 570 aa19.3■□□□□ 0.68
TPM1-205ENST00000357980 CCSER1Q9C0I3 900 aa19.3■□□□□ 0.68
TPM1-205ENST00000357980 ASCC2Q9H1I8 757 aaPredicted RBP19.3■□□□□ 0.68
TPM1-205ENST00000357980 EHMT1Q9H9B1 1298 aa19.3■□□□□ 0.68
TPM1-205ENST00000357980 FRMPD4Q14CM0 1322 aa19.29■□□□□ 0.68
TPM1-205ENST00000357980 CDC25AP30304 524 aa19.29■□□□□ 0.68
TPM1-205ENST00000357980 TECP42680 631 aa19.29■□□□□ 0.68
TPM1-205ENST00000357980 TXKP42681 527 aa19.29■□□□□ 0.68
TPM1-205ENST00000357980 RPS6P62753 249 aaKnown RBP19.29■□□□□ 0.68
TPM1-205ENST00000357980 IRX3P78415 501 aaPredicted RBP19.29■□□□□ 0.68
TPM1-205ENST00000357980 TYRO3Q06418 890 aa19.29■□□□□ 0.68
TPM1-205ENST00000357980 E2F4Q16254 413 aa19.29■□□□□ 0.68
TPM1-205ENST00000357980 TKFCQ3LXA3 575 aa19.29■□□□□ 0.68
TPM1-205ENST00000357980 CNNM3Q8NE01 707 aa19.29■□□□□ 0.68
TPM1-205ENST00000357980 ETNPPLQ8TBG4 499 aa19.29■□□□□ 0.68
TPM1-205ENST00000357980 SYTL5Q8TDW5 730 aaPredicted RBP19.29■□□□□ 0.68
TPM1-205ENST00000357980 SERTAD1Q9UHV2 236 aa19.29■□□□□ 0.68
TPM1-205ENST00000357980 LCTP09848 1927 aa19.29■□□□□ 0.68
TPM1-205ENST00000357980 STAT3P40763 770 aa19.28■□□□□ 0.68
TPM1-205ENST00000357980 MDM2Q00987 491 aaPredicted RBP19.28■□□□□ 0.68
TPM1-205ENST00000357980 SLC30A10Q6XR72 485 aa19.28■□□□□ 0.68
TPM1-205ENST00000357980 ERCC4Q92889 916 aaPredicted RBP19.28■□□□□ 0.68
TPM1-205ENST00000357980 RBSNQ9H1K0 784 aa19.28■□□□□ 0.68
TPM1-205ENST00000357980 KIAA1468Q9P260 1216 aa19.28■□□□□ 0.68
TPM1-205ENST00000357980 IGLV3-22A0A075B6J6 115 aa19.28■□□□□ 0.68
TPM1-205ENST00000357980 SLFN14P0C7P3 912 aa19.28■□□□□ 0.68
TPM1-205ENST00000357980 TXLNAP40222 546 aa19.28■□□□□ 0.68
TPM1-205ENST00000357980 PRR16Q569H4 304 aa19.28■□□□□ 0.68
TPM1-205ENST00000357980 DHX58Q96C10 678 aa19.28■□□□□ 0.68
TPM1-205ENST00000357980 MS4A4AQ96JQ5 239 aa19.28■□□□□ 0.68
TPM1-205ENST00000357980 PYM1Q9BRP8 204 aaKnown RBP19.28■□□□□ 0.68
TPM1-205ENST00000357980 TTC12Q9H892 705 aaPredicted RBP19.28■□□□□ 0.68
TPM1-205ENST00000357980 GRPEL1Q9HAV7 217 aa19.28■□□□□ 0.68
TPM1-205ENST00000357980 BTBD7Q9P203 1132 aa19.28■□□□□ 0.68
TPM1-205ENST00000357980 USP25Q9UHP3 1055 aa19.28■□□□□ 0.68
TPM1-205ENST00000357980 TBX3O15119 743 aa19.27■□□□□ 0.68
TPM1-205ENST00000357980 HERVK_113P62684 666 aa19.27■□□□□ 0.68
TPM1-205ENST00000357980 PDIA5Q14554 519 aa19.27■□□□□ 0.68
TPM1-205ENST00000357980 TMEM266Q2M3C6 531 aa19.27■□□□□ 0.68
TPM1-205ENST00000357980 RNF207Q6ZRF8 634 aa19.27■□□□□ 0.68
TPM1-205ENST00000357980 CYP2W1Q8TAV3 490 aa19.27■□□□□ 0.68
TPM1-205ENST00000357980 RABGAP1Q9Y3P9 1069 aa19.27■□□□□ 0.68
TPM1-205ENST00000357980 UBA7P41226 1012 aa19.26■□□□□ 0.67
TPM1-205ENST00000357980 MRE11P49959 708 aa19.26■□□□□ 0.67
TPM1-205ENST00000357980 UBXN2AP68543 259 aa19.26■□□□□ 0.67
TPM1-205ENST00000357980 PABPC4Q13310 644 aaKnown RBP eCLIP19.26■□□□□ 0.671e-6■□□□□ 11.2
TPM1-205ENST00000357980 PLS1Q14651 629 aa19.26■□□□□ 0.67
TPM1-205ENST00000357980 KARSQ15046 597 aaKnown RBP19.26■□□□□ 0.67
TPM1-205ENST00000357980 SASS6Q6UVJ0 657 aa19.26■□□□□ 0.67
TPM1-205ENST00000357980 IQUBQ8NA54 791 aa19.26■□□□□ 0.67
TPM1-205ENST00000357980 GJA10Q969M2 543 aa19.26■□□□□ 0.67
TPM1-205ENST00000357980 MMTAG2Q9BU76 263 aaKnown RBP19.26■□□□□ 0.67
TPM1-205ENST00000357980 MAF1Q9H063 256 aa19.26■□□□□ 0.67
TPM1-205ENST00000357980 ACAD9Q9H845 621 aa19.26■□□□□ 0.67
TPM1-205ENST00000357980 DISC1Q9NRI5 854 aa19.26■□□□□ 0.67
TPM1-205ENST00000357980 FOXN1O15353 648 aa19.25■□□□□ 0.67
TPM1-205ENST00000357980 PNOCQ13519 176 aa19.25■□□□□ 0.67
TPM1-205ENST00000357980 KANK3Q6NY19 840 aa19.25■□□□□ 0.67
TPM1-205ENST00000357980 PDXDC2PQ6P474 469 aa19.25■□□□□ 0.67
TPM1-205ENST00000357980 NSMFQ6X4W1 530 aa19.25■□□□□ 0.67
TPM1-205ENST00000357980 SH3RF1Q7Z6J0 888 aa19.25■□□□□ 0.67
TPM1-205ENST00000357980 SLFN12Q8IYM2 578 aa19.25■□□□□ 0.67
TPM1-205ENST00000357980 RAB34Q9BZG1 259 aa19.25■□□□□ 0.67
TPM1-205ENST00000357980 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.25■□□□□ 0.67
TPM1-205ENST00000357980 POTEMA6NI47 508 aa19.25■□□□□ 0.67
TPM1-205ENST00000357980 PEX10O60683 326 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms