RNA–Protein interactions for RNA: ENST00000357896.7

IFT20-202, Transcript of intraflagellar transport 20, humanhuman

TSL 1 (best) BASIC

Gene IFT20, Length 974 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-202ENST00000357896 SUGCTQ9HAC7 445 aa18.76■□□□□ 0.59
IFT20-202ENST00000357896 PTPDC1A2A3K4 754 aa18.75■□□□□ 0.59
IFT20-202ENST00000357896 B4DLN1 442 aa18.75■□□□□ 0.59
IFT20-202ENST00000357896 SSTR3P32745 418 aaPredicted RBP18.75■□□□□ 0.59
IFT20-202ENST00000357896 MRPL12P52815 198 aaKnown RBP18.75■□□□□ 0.59
IFT20-202ENST00000357896 ERVK-21P61565 698 aa18.75■□□□□ 0.59
IFT20-202ENST00000357896 CSPP1Q1MSJ5 1256 aa18.75■□□□□ 0.59
IFT20-202ENST00000357896 PUS10Q3MIT2 529 aaKnown RBP18.75■□□□□ 0.59
IFT20-202ENST00000357896 SPRED2Q7Z698 418 aa18.75■□□□□ 0.59
IFT20-202ENST00000357896 UIMC1Q96RL1 719 aa18.75■□□□□ 0.59
IFT20-202ENST00000357896 NAPBQ9H115 298 aa18.75■□□□□ 0.59
IFT20-202ENST00000357896 RANBP17Q9H2T7 1088 aaKnown RBP18.75■□□□□ 0.59
IFT20-202ENST00000357896 PNMA2Q9UL42 364 aa18.75■□□□□ 0.59
IFT20-202ENST00000357896 SCN10AQ9Y5Y9 1956 aa18.74■□□□□ 0.59
IFT20-202ENST00000357896 ABHD14A-ACY1A0A1B0GW23 586 aa18.74■□□□□ 0.59
IFT20-202ENST00000357896 TSPY2A6NKD2 308 aa18.74■□□□□ 0.59
IFT20-202ENST00000357896 M0R2C6 588 aa18.74■□□□□ 0.59
IFT20-202ENST00000357896 EFCAB14O75071 495 aa18.74■□□□□ 0.59
IFT20-202ENST00000357896 GJB5O95377 273 aa18.74■□□□□ 0.59
IFT20-202ENST00000357896 SELPP16109 830 aa18.74■□□□□ 0.59
IFT20-202ENST00000357896 KCNA5P22460 613 aa18.74■□□□□ 0.59
IFT20-202ENST00000357896 PPARAQ07869 468 aa18.74■□□□□ 0.59
IFT20-202ENST00000357896 CNKSR3Q6P9H4 555 aa18.74■□□□□ 0.59
IFT20-202ENST00000357896 DCAF4Q8WV16 495 aa18.74■□□□□ 0.59
IFT20-202ENST00000357896 KCNH6Q9H252 994 aa18.74■□□□□ 0.59
IFT20-202ENST00000357896 MTUS1Q9ULD2 1270 aa18.74■□□□□ 0.59
IFT20-202ENST00000357896 NFIBO00712 420 aa18.73■□□□□ 0.59
IFT20-202ENST00000357896 TXNP10599 105 aaKnown RBP18.73■□□□□ 0.59
IFT20-202ENST00000357896 CHMP4BP1P59074 171 aa18.73■□□□□ 0.59
IFT20-202ENST00000357896 CCDC96Q2M329 555 aa18.73■□□□□ 0.59
IFT20-202ENST00000357896 RNF207Q6ZRF8 634 aa18.73■□□□□ 0.59
IFT20-202ENST00000357896 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.73■□□□□ 0.59
IFT20-202ENST00000357896 PPP1R13LQ8WUF5 828 aa18.73■□□□□ 0.59
IFT20-202ENST00000357896 CRBNQ96SW2 442 aa18.73■□□□□ 0.59
IFT20-202ENST00000357896 IL17RBQ9NRM6 502 aa18.73■□□□□ 0.59
IFT20-202ENST00000357896 TANC1Q9C0D5 1861 aa18.72■□□□□ 0.59
IFT20-202ENST00000357896 CALML3P27482 149 aa18.72■□□□□ 0.59
IFT20-202ENST00000357896 MRE11P49959 708 aa18.72■□□□□ 0.59
IFT20-202ENST00000357896 PTCRAQ6ISU1 281 aaPredicted RBP18.72■□□□□ 0.59
IFT20-202ENST00000357896 BTNL9Q6UXG8 535 aa18.72■□□□□ 0.59
IFT20-202ENST00000357896 LRRC8DQ7L1W4 858 aa18.72■□□□□ 0.59
IFT20-202ENST00000357896 TMCO2Q7Z6W1 182 aaPredicted RBP18.72■□□□□ 0.59
IFT20-202ENST00000357896 SESTD1Q86VW0 696 aa18.72■□□□□ 0.59
IFT20-202ENST00000357896 DNERQ8NFT8 737 aa18.72■□□□□ 0.59
IFT20-202ENST00000357896 CTNNA3Q9UI47 895 aa18.72■□□□□ 0.59
IFT20-202ENST00000357896 LINC01553A4QN01 128 aa18.71■□□□□ 0.59
IFT20-202ENST00000357896 SMARCA5O60264 1052 aaPredicted RBP18.71■□□□□ 0.59
IFT20-202ENST00000357896 CXCL10P02778 98 aa18.71■□□□□ 0.59
IFT20-202ENST00000357896 EDNRBP24530 442 aa18.71■□□□□ 0.59
IFT20-202ENST00000357896 DEFB103AP81534 67 aa18.71■□□□□ 0.59
IFT20-202ENST00000357896 IKBKEQ14164 716 aa18.71■□□□□ 0.59
IFT20-202ENST00000357896 GPNMBQ14956 572 aa18.71■□□□□ 0.59
IFT20-202ENST00000357896 SYDE2Q5VT97 1194 aa18.71■□□□□ 0.59
IFT20-202ENST00000357896 MTMR7Q9Y216 660 aa18.71■□□□□ 0.59
IFT20-202ENST00000357896 COL4A4P53420 1690 aaPredicted RBP18.7■□□□□ 0.58
IFT20-202ENST00000357896 GRXCR2A6NFK2 248 aa18.7■□□□□ 0.58
IFT20-202ENST00000357896 RBL2Q08999 1139 aa18.7■□□□□ 0.58
IFT20-202ENST00000357896 SLC30A10Q6XR72 485 aa18.7■□□□□ 0.58
IFT20-202ENST00000357896 COPS5Q92905 334 aa18.7■□□□□ 0.58
IFT20-202ENST00000357896 FAM50BQ9Y247 325 aa18.7■□□□□ 0.58
IFT20-202ENST00000357896 BRWD1Q9NSI6 2320 aa18.69■□□□□ 0.58
IFT20-202ENST00000357896 LCTP09848 1927 aa18.69■□□□□ 0.58
IFT20-202ENST00000357896 DCXO43602 365 aa18.69■□□□□ 0.58
IFT20-202ENST00000357896 NMT2O60551 498 aa18.69■□□□□ 0.58
IFT20-202ENST00000357896 IL9P15248 144 aa18.69■□□□□ 0.58
IFT20-202ENST00000357896 SLC16A2P36021 539 aa18.69■□□□□ 0.58
IFT20-202ENST00000357896 NOVP48745 357 aa18.69■□□□□ 0.58
IFT20-202ENST00000357896 RPS6P62753 249 aaKnown RBP18.69■□□□□ 0.58
IFT20-202ENST00000357896 HNRNPUQ00839 825 aaKnown RBP eCLIP18.69■□□□□ 0.58
IFT20-202ENST00000357896 PTPROQ16827 1216 aa18.69■□□□□ 0.58
IFT20-202ENST00000357896 TTBK2Q6IQ55 1244 aa18.69■□□□□ 0.58
IFT20-202ENST00000357896 GDF6Q6KF10 455 aaPredicted RBP18.69■□□□□ 0.58
IFT20-202ENST00000357896 TET1Q8NFU7 2136 aa18.69■□□□□ 0.58
IFT20-202ENST00000357896 CLEC4DQ8WXI8 215 aa18.69■□□□□ 0.58
IFT20-202ENST00000357896 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.69■□□□□ 0.58
IFT20-202ENST00000357896 INSL6Q9Y581 213 aa18.69■□□□□ 0.58
IFT20-202ENST00000357896 RANBP6O60518 1105 aaKnown RBP18.68■□□□□ 0.58
IFT20-202ENST00000357896 NBNO60934 754 aa18.68■□□□□ 0.58
IFT20-202ENST00000357896 CKBP12277 381 aa18.68■□□□□ 0.58
IFT20-202ENST00000357896 CASTP20810 708 aaKnown RBP18.68■□□□□ 0.58
IFT20-202ENST00000357896 NHLH1Q02575 133 aa18.68■□□□□ 0.58
IFT20-202ENST00000357896 RASGRP2Q7LDG7 609 aa18.68■□□□□ 0.58
IFT20-202ENST00000357896 FBXO22Q8NEZ5 403 aa18.68■□□□□ 0.58
IFT20-202ENST00000357896 AFG1LQ8WV93 481 aa18.68■□□□□ 0.58
IFT20-202ENST00000357896 CTAGE1Q96RT6 745 aa18.68■□□□□ 0.58
IFT20-202ENST00000357896 POTEB3A0JP26 581 aa18.67■□□□□ 0.58
IFT20-202ENST00000357896 GH1P01241 217 aa18.67■□□□□ 0.58
IFT20-202ENST00000357896 POTEBQ6S5H4 581 aa18.67■□□□□ 0.58
IFT20-202ENST00000357896 C7orf31Q8N865 590 aa18.67■□□□□ 0.58
IFT20-202ENST00000357896 NEK9Q8TD19 979 aa18.67■□□□□ 0.58
IFT20-202ENST00000357896 MRPL38Q96DV4 380 aaKnown RBP18.67■□□□□ 0.58
IFT20-202ENST00000357896 SEC62Q99442 399 aaKnown RBP18.67■□□□□ 0.58
IFT20-202ENST00000357896 GTF2IRD1Q9UHL9 959 aa18.67■□□□□ 0.58
IFT20-202ENST00000357896 MMP3P08254 477 aa18.66■□□□□ 0.58
IFT20-202ENST00000357896 TOP1P11387 765 aaKnown RBP18.66■□□□□ 0.58
IFT20-202ENST00000357896 TIGD5Q53EQ6 642 aa18.66■□□□□ 0.58
IFT20-202ENST00000357896 FAM117BQ6P1L5 589 aa18.66■□□□□ 0.58
IFT20-202ENST00000357896 CCDC62Q6P9F0 684 aa18.66■□□□□ 0.58
IFT20-202ENST00000357896 RGS22Q8NE09 1264 aa18.66■□□□□ 0.58
IFT20-202ENST00000357896 DHX38Q92620 1227 aaKnown RBP18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms