RNA–Protein interactions for RNA: ENST00000357783.6

PHTF1-201, Transcript of putative homeodomain transcription factor 1, humanhuman

TSL 1 (best) BASIC

Gene PHTF1, Length 2,747 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-201ENST00000357783 CLCN6P51797 869 aa17.71■□□□□ 0.42
PHTF1-201ENST00000357783 MRPL12P52815 198 aaKnown RBP17.71■□□□□ 0.42
PHTF1-201ENST00000357783 KRT79Q5XKE5 535 aa17.71■□□□□ 0.42
PHTF1-201ENST00000357783 C2CD5Q86YS7 1000 aa17.71■□□□□ 0.42
PHTF1-201ENST00000357783 EPC1Q9H2F5 836 aa17.71■□□□□ 0.42
PHTF1-201ENST00000357783 LUC7L2Q9Y383 392 aaKnown RBP17.71■□□□□ 0.42
PHTF1-201ENST00000357783 EEF2P13639 858 aaKnown RBP17.7■□□□□ 0.42
PHTF1-201ENST00000357783 HMGB2P26583 209 aaKnown RBP17.7■□□□□ 0.42
PHTF1-201ENST00000357783 OR8K1Q8NGG5 319 aa17.7■□□□□ 0.42
PHTF1-201ENST00000357783 CCDC17Q96LX7 622 aa17.7■□□□□ 0.42
PHTF1-201ENST00000357783 MARCH6O60337 910 aa17.7■□□□□ 0.42
PHTF1-201ENST00000357783 KLK7P49862 253 aa17.7■□□□□ 0.42
PHTF1-201ENST00000357783 TEX35Q5T0J7 233 aa17.7■□□□□ 0.42
PHTF1-201ENST00000357783 KCNK18Q7Z418 384 aa17.7■□□□□ 0.42
PHTF1-201ENST00000357783 SEMA6BQ9H3T3 888 aa17.7■□□□□ 0.42
PHTF1-201ENST00000357783 ECE2O60344 883 aa17.69■□□□□ 0.42
PHTF1-201ENST00000357783 IDEP14735 1019 aa17.69■□□□□ 0.42
PHTF1-201ENST00000357783 PDIA5Q14554 519 aa17.69■□□□□ 0.42
PHTF1-201ENST00000357783 CERKLQ49MI3 558 aaPredicted RBP17.69■□□□□ 0.42
PHTF1-201ENST00000357783 PPP4R3AQ6IN85 833 aa17.69■□□□□ 0.42
PHTF1-201ENST00000357783 FAM114A1Q8IWE2 563 aa17.69■□□□□ 0.42
PHTF1-201ENST00000357783 RAD54LQ92698 747 aa17.69■□□□□ 0.42
PHTF1-201ENST00000357783 MTMR8Q96EF0 704 aa17.69■□□□□ 0.42
PHTF1-201ENST00000357783 TRIM34Q9BYJ4 488 aa17.69■□□□□ 0.42
PHTF1-201ENST00000357783 FAM198AQ9UFP1 575 aa17.69■□□□□ 0.42
PHTF1-201ENST00000357783 ARFGEF1Q9Y6D6 1849 aa17.69■□□□□ 0.42
PHTF1-201ENST00000357783 USP17L15C9J2P7 530 aa17.69■□□□□ 0.42
PHTF1-201ENST00000357783 USP17L13C9JLJ4 530 aa17.69■□□□□ 0.42
PHTF1-201ENST00000357783 USP17L11C9JVI0 530 aa17.69■□□□□ 0.42
PHTF1-201ENST00000357783 USP17L18D6R9N7 530 aa17.69■□□□□ 0.42
PHTF1-201ENST00000357783 USP17L22D6RA61 530 aa17.69■□□□□ 0.42
PHTF1-201ENST00000357783 USP17L17D6RBQ6 530 aa17.69■□□□□ 0.42
PHTF1-201ENST00000357783 USP17L19D6RCP7 530 aa17.69■□□□□ 0.42
PHTF1-201ENST00000357783 USP17L20D6RJB6 530 aa17.69■□□□□ 0.42
PHTF1-201ENST00000357783 PPP1R2P41236 205 aa17.69■□□□□ 0.42
PHTF1-201ENST00000357783 SLC1A4P43007 532 aa17.69■□□□□ 0.42
PHTF1-201ENST00000357783 TBC1D8BQ0IIM8 1120 aa17.69■□□□□ 0.42
PHTF1-201ENST00000357783 USP17L24Q0WX57 530 aa17.69■□□□□ 0.42
PHTF1-201ENST00000357783 QRICH1Q2TAL8 776 aa17.69■□□□□ 0.42
PHTF1-201ENST00000357783 USP17L6PQ6QN14 398 aa17.69■□□□□ 0.42
PHTF1-201ENST00000357783 UNC13DQ70J99 1090 aa17.69■□□□□ 0.42
PHTF1-201ENST00000357783 SLC35F6Q8N357 371 aa17.69■□□□□ 0.42
PHTF1-201ENST00000357783 HAS1Q92839 578 aa17.69■□□□□ 0.42
PHTF1-201ENST00000357783 CAPN11Q9UMQ6 739 aa17.69■□□□□ 0.42
PHTF1-201ENST00000357783 NKRFO15226 690 aaKnown RBP eCLIP17.68■□□□□ 0.42
PHTF1-201ENST00000357783 DACT2Q5SW24 774 aa17.68■□□□□ 0.42
PHTF1-201ENST00000357783 SLFN13Q68D06 897 aa17.68■□□□□ 0.42
PHTF1-201ENST00000357783 SH3BP5LQ7L8J4 393 aa17.68■□□□□ 0.42
PHTF1-201ENST00000357783 PCMTD1Q96MG8 357 aaPredicted RBP17.68■□□□□ 0.42
PHTF1-201ENST00000357783 DNAJC7Q99615 494 aa17.68■□□□□ 0.42
PHTF1-201ENST00000357783 NOC4LQ9BVI4 516 aaKnown RBP17.68■□□□□ 0.42
PHTF1-201ENST00000357783 GTPBP4Q9BZE4 634 aaKnown RBP17.68■□□□□ 0.42
PHTF1-201ENST00000357783 ZSWIM4Q9H7M6 989 aa17.68■□□□□ 0.42
PHTF1-201ENST00000357783 SLX4Q8IY92 1834 aa17.68■□□□□ 0.42
PHTF1-201ENST00000357783 PLSCR1O15162 318 aa17.68■□□□□ 0.42
PHTF1-201ENST00000357783 TRIM21P19474 475 aaKnown RBP17.68■□□□□ 0.42
PHTF1-201ENST00000357783 ARHGAP25P42331 645 aa17.68■□□□□ 0.42
PHTF1-201ENST00000357783 ECM1Q16610 540 aa17.68■□□□□ 0.42
PHTF1-201ENST00000357783 TSR1Q2NL82 804 aaKnown RBP17.68■□□□□ 0.42
PHTF1-201ENST00000357783 TMEM119Q4V9L6 283 aa17.68■□□□□ 0.42
PHTF1-201ENST00000357783 STRIP1Q5VSL9 837 aa17.68■□□□□ 0.42
PHTF1-201ENST00000357783 DHX36Q9H2U1 1008 aaKnown RBP17.68■□□□□ 0.42
PHTF1-201ENST00000357783 PI4KBQ9UBF8 816 aa17.68■□□□□ 0.42
PHTF1-201ENST00000357783 EPN1Q9Y6I3 576 aaPredicted RBP17.68■□□□□ 0.42
PHTF1-201ENST00000357783 NDUFA10O95299 355 aa17.67■□□□□ 0.42
PHTF1-201ENST00000357783 SEPT2Q15019 361 aa17.67■□□□□ 0.42
PHTF1-201ENST00000357783 KIF4BQ2VIQ3 1234 aa17.67■□□□□ 0.42
PHTF1-201ENST00000357783 AGPAT5Q9NUQ2 364 aa17.67■□□□□ 0.42
PHTF1-201ENST00000357783 REXO2Q9Y3B8 237 aaKnown RBP17.67■□□□□ 0.42
PHTF1-201ENST00000357783 PCDHA1Q9Y5I3 950 aa17.67■□□□□ 0.42
PHTF1-201ENST00000357783 CDC37Q16543 378 aaPredicted RBP17.67■□□□□ 0.42
PHTF1-201ENST00000357783 MIIPQ5JXC2 388 aa17.67■□□□□ 0.42
PHTF1-201ENST00000357783 FLAD1Q8NFF5 587 aa17.67■□□□□ 0.42
PHTF1-201ENST00000357783 DDX12PQ92771 950 aa17.67■□□□□ 0.42
PHTF1-201ENST00000357783 ARGLU1Q9NWB6 273 aaPredicted RBP17.67■□□□□ 0.42
PHTF1-201ENST00000357783 PVALEFA0A1B0GWK0 134 aa17.66■□□□□ 0.42
PHTF1-201ENST00000357783 CTAGE9A4FU28 777 aa17.66■□□□□ 0.42
PHTF1-201ENST00000357783 GDF11O95390 407 aa17.66■□□□□ 0.42
PHTF1-201ENST00000357783 SNAP25P60880 206 aa17.66■□□□□ 0.42
PHTF1-201ENST00000357783 COBLL1Q53SF7 1204 aa17.66■□□□□ 0.42
PHTF1-201ENST00000357783 UTP14CQ5TAP6 766 aaKnown RBP17.66■□□□□ 0.42
PHTF1-201ENST00000357783 CENPPQ6IPU0 288 aa17.66■□□□□ 0.42
PHTF1-201ENST00000357783 WDR59Q6PJI9 974 aa17.66■□□□□ 0.42
PHTF1-201ENST00000357783 KANSL2Q9H9L4 492 aa17.66■□□□□ 0.42
PHTF1-201ENST00000357783 TRIM10Q9UDY6 481 aa17.66■□□□□ 0.42
PHTF1-201ENST00000357783 ATF5Q9Y2D1 282 aaPredicted RBP17.66■□□□□ 0.42
PHTF1-201ENST00000357783 RASSF10A6NK89 507 aa17.66■□□□□ 0.42
PHTF1-201ENST00000357783 H0YIN7 160 aa17.66■□□□□ 0.42
PHTF1-201ENST00000357783 ICA1Q05084 483 aa17.66■□□□□ 0.42
PHTF1-201ENST00000357783 RSRC2Q7L4I2 434 aaKnown RBP17.66■□□□□ 0.42
PHTF1-201ENST00000357783 KRT222Q8N1A0 295 aa17.66■□□□□ 0.42
PHTF1-201ENST00000357783 DCAF4Q8WV16 495 aa17.66■□□□□ 0.42
PHTF1-201ENST00000357783 PCDHA12Q9UN75 941 aa17.66■□□□□ 0.42
PHTF1-201ENST00000357783 GCFC2P16383 781 aaKnown RBP17.65■□□□□ 0.42
PHTF1-201ENST00000357783 CHRNA5P30532 468 aa17.65■□□□□ 0.42
PHTF1-201ENST00000357783 DMTNQ08495 405 aa17.65■□□□□ 0.42
PHTF1-201ENST00000357783 LRRC41Q15345 812 aa17.65■□□□□ 0.42
PHTF1-201ENST00000357783 GLIS3Q8NEA6 775 aa17.65■□□□□ 0.42
PHTF1-201ENST00000357783 GOLGA1Q92805 767 aa17.65■□□□□ 0.42
PHTF1-201ENST00000357783 IDI2Q9BXS1 227 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms