RNA–Protein interactions for RNA: ENST00000357388.7

SMC4-202, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-202ENST00000357388 HESX1Q9UBX0 185 aa13.93□□□□□ -0.18
SMC4-202ENST00000357388 MT-ND3P03897 115 aa13.93□□□□□ -0.18
SMC4-202ENST00000357388 FBLN1P23142 703 aa13.93□□□□□ -0.18
SMC4-202ENST00000357388 POLR2FP61218 127 aaKnown RBP13.93□□□□□ -0.18
SMC4-202ENST00000357388 CASP8Q14790 479 aa13.93□□□□□ -0.18
SMC4-202ENST00000357388 ARHGEF16Q5VV41 709 aa13.93□□□□□ -0.18
SMC4-202ENST00000357388 DCPSQ96C86 337 aaKnown RBP13.93□□□□□ -0.18
SMC4-202ENST00000357388 GSDMAQ96QA5 445 aa13.93□□□□□ -0.18
SMC4-202ENST00000357388 PARD6BQ9BYG5 372 aa13.93□□□□□ -0.18
SMC4-202ENST00000357388 FANCLQ9NW38 375 aa13.93□□□□□ -0.18
SMC4-202ENST00000357388 TEKT2Q9UIF3 430 aa13.93□□□□□ -0.18
SMC4-202ENST00000357388 PPME1Q9Y570 386 aa13.93□□□□□ -0.18
SMC4-202ENST00000357388 CFAP73A6NFT4 308 aa13.93□□□□□ -0.18
SMC4-202ENST00000357388 XPOTO43592 962 aaKnown RBP13.93□□□□□ -0.18
SMC4-202ENST00000357388 EHHADHQ08426 723 aa13.93□□□□□ -0.18
SMC4-202ENST00000357388 NUDCD3Q8IVD9 361 aa13.93□□□□□ -0.18
SMC4-202ENST00000357388 ANO3Q9BYT9 981 aa13.93□□□□□ -0.18
SMC4-202ENST00000357388 ARHGEF10O15013 1369 aa13.93□□□□□ -0.18
SMC4-202ENST00000357388 NCKAP5LQ9HCH0 1330 aa13.93□□□□□ -0.18
SMC4-202ENST00000357388 RGS12O14924 1447 aa13.93□□□□□ -0.18
SMC4-202ENST00000357388 RWDD2BP57060 319 aa13.93□□□□□ -0.18
SMC4-202ENST00000357388 SLC17A8Q8NDX2 589 aa13.93□□□□□ -0.18
SMC4-202ENST00000357388 STAMBPL1Q96FJ0 436 aa13.93□□□□□ -0.18
SMC4-202ENST00000357388 ACTN1P12814 892 aa13.92□□□□□ -0.18
SMC4-202ENST00000357388 ATICP31939 592 aa13.92□□□□□ -0.18
SMC4-202ENST00000357388 NSFP46459 744 aaKnown RBP13.92□□□□□ -0.18
SMC4-202ENST00000357388 TIMM10P62072 90 aa13.92□□□□□ -0.18
SMC4-202ENST00000357388 SULF1Q8IWU6 871 aa13.92□□□□□ -0.18
SMC4-202ENST00000357388 SPTLC3Q9NUV7 552 aa13.92□□□□□ -0.18
SMC4-202ENST00000357388 PFKFB2O60825 505 aa13.92□□□□□ -0.18
SMC4-202ENST00000357388 KRT4P19013 534 aa13.92□□□□□ -0.18
SMC4-202ENST00000357388 TCP10Q12799 353 aa13.92□□□□□ -0.18
SMC4-202ENST00000357388 GRAMD1BQ3KR37 738 aa13.92□□□□□ -0.18
SMC4-202ENST00000357388 ATP6V0A1Q93050 837 aa13.92□□□□□ -0.18
SMC4-202ENST00000357388 PAGR1Q9BTK6 254 aa13.92□□□□□ -0.18
SMC4-202ENST00000357388 DIS3Q9Y2L1 958 aaKnown RBP13.92□□□□□ -0.18
SMC4-202ENST00000357388 EIF2AK4Q9P2K8 1649 aaKnown RBP13.92□□□□□ -0.18
SMC4-202ENST00000357388 RPN1P04843 607 aaKnown RBP13.92□□□□□ -0.18
SMC4-202ENST00000357388 ATP6V1E1P36543 226 aa13.92□□□□□ -0.18
SMC4-202ENST00000357388 CCNA1P78396 465 aa13.92□□□□□ -0.18
SMC4-202ENST00000357388 TMED2Q15363 201 aa13.92□□□□□ -0.18
SMC4-202ENST00000357388 ZC3H18Q86VM9 953 aaKnown RBP13.92□□□□□ -0.18
SMC4-202ENST00000357388 SLFN12Q8IYM2 578 aa13.92□□□□□ -0.18
SMC4-202ENST00000357388 METTL13Q8N6R0 699 aa13.92□□□□□ -0.18
SMC4-202ENST00000357388 SPATA5Q8NB90 893 aa13.92□□□□□ -0.18
SMC4-202ENST00000357388 RNF169Q8NCN4 708 aa13.92□□□□□ -0.18
SMC4-202ENST00000357388 USP40Q9NVE5 1235 aa13.92□□□□□ -0.18
SMC4-202ENST00000357388 TBC1D7Q9P0N9 293 aa13.92□□□□□ -0.18
SMC4-202ENST00000357388 ANAPC5Q9UJX4 755 aa13.92□□□□□ -0.18
SMC4-202ENST00000357388 POTEB3A0JP26 581 aa13.92□□□□□ -0.18
SMC4-202ENST00000357388 TYW5A2RUC4 315 aaKnown RBP13.92□□□□□ -0.18
SMC4-202ENST00000357388 RASSF10A6NK89 507 aa13.92□□□□□ -0.18
SMC4-202ENST00000357388 KRT10P13645 584 aa13.92□□□□□ -0.18
SMC4-202ENST00000357388 NR1H3Q13133 447 aa13.92□□□□□ -0.18
SMC4-202ENST00000357388 TCP11X2Q5H9J9 407 aa13.92□□□□□ -0.18
SMC4-202ENST00000357388 POTEBQ6S5H4 581 aa13.92□□□□□ -0.18
SMC4-202ENST00000357388 TTLL7Q6ZT98 887 aa13.92□□□□□ -0.18
SMC4-202ENST00000357388 SYT2Q8N9I0 419 aaPredicted RBP13.92□□□□□ -0.18
SMC4-202ENST00000357388 UHMK1Q8TAS1 419 aaKnown RBP13.92□□□□□ -0.18
SMC4-202ENST00000357388 A0A1B0GW55 424 aa13.91□□□□□ -0.18
SMC4-202ENST00000357388 DUX4L2P0CJ85 424 aa13.91□□□□□ -0.18
SMC4-202ENST00000357388 DUX4L3P0CJ86 424 aa13.91□□□□□ -0.18
SMC4-202ENST00000357388 DUX4L4P0CJ87 422 aa13.91□□□□□ -0.18
SMC4-202ENST00000357388 DUX4L5P0CJ88 424 aa13.91□□□□□ -0.18
SMC4-202ENST00000357388 DUX4L6P0CJ89 424 aa13.91□□□□□ -0.18
SMC4-202ENST00000357388 DUX4L7P0CJ90 424 aa13.91□□□□□ -0.18
SMC4-202ENST00000357388 DHX9Q08211 1270 aaKnown RBP13.91□□□□□ -0.18
SMC4-202ENST00000357388 GPBP1Q86WP2 473 aa13.91□□□□□ -0.18
SMC4-202ENST00000357388 MAPKAPK5Q8IW41 473 aa13.91□□□□□ -0.18
SMC4-202ENST00000357388 BBS5Q8N3I7 341 aa13.91□□□□□ -0.18
SMC4-202ENST00000357388 FBXL13Q8NEE6 735 aa13.91□□□□□ -0.18
SMC4-202ENST00000357388 PALMDQ9NP74 551 aa13.91□□□□□ -0.18
SMC4-202ENST00000357388 DUX4Q9UBX2 424 aa13.91□□□□□ -0.18
SMC4-202ENST00000357388 BCS1LQ9Y276 419 aa13.91□□□□□ -0.18
SMC4-202ENST00000357388 ABCC1P33527 1531 aa13.91□□□□□ -0.18
SMC4-202ENST00000357388 MDM2Q00987 491 aaPredicted RBP13.91□□□□□ -0.18
SMC4-202ENST00000357388 SESTD1Q86VW0 696 aa13.91□□□□□ -0.18
SMC4-202ENST00000357388 POMGNT1Q8WZA1 660 aa13.91□□□□□ -0.18
SMC4-202ENST00000357388 USP21Q9UK80 565 aa13.91□□□□□ -0.18
SMC4-202ENST00000357388 SNX5Q9Y5X3 404 aa13.91□□□□□ -0.18
SMC4-202ENST00000357388 ZNF518AQ6AHZ1 1483 aa13.91□□□□□ -0.18
SMC4-202ENST00000357388 IQANK1A0A1B0GTG1 560 aa13.91□□□□□ -0.18
SMC4-202ENST00000357388 DHTKD1Q96HY7 919 aaPredicted RBP13.91□□□□□ -0.18
SMC4-202ENST00000357388 BATF3Q9NR55 127 aa13.91□□□□□ -0.18
SMC4-202ENST00000357388 NRBP2Q9NSY0 501 aa13.91□□□□□ -0.18
SMC4-202ENST00000357388 MTMR6Q9Y217 621 aa13.91□□□□□ -0.18
SMC4-202ENST00000357388 DUOX2Q9NRD8 1548 aa13.91□□□□□ -0.18
SMC4-202ENST00000357388 PRDM1O75626 825 aa13.91□□□□□ -0.18
SMC4-202ENST00000357388 PNMA6AP0CW24 399 aaPredicted RBP13.91□□□□□ -0.18
SMC4-202ENST00000357388 LIG4P49917 911 aa13.91□□□□□ -0.18
SMC4-202ENST00000357388 KRT26Q7Z3Y9 468 aa13.91□□□□□ -0.18
SMC4-202ENST00000357388 ST7Q9NRC1 585 aa13.91□□□□□ -0.18
SMC4-202ENST00000357388 TRPC5Q9UL62 973 aaPredicted RBP13.91□□□□□ -0.18
SMC4-202ENST00000357388 CAPN11Q9UMQ6 739 aa13.91□□□□□ -0.18
SMC4-202ENST00000357388 ATP8A1Q9Y2Q0 1164 aa13.91□□□□□ -0.18
SMC4-202ENST00000357388 PCF11O94913 1555 aaKnown RBP13.91□□□□□ -0.18
SMC4-202ENST00000357388 CPP00450 1065 aa13.91□□□□□ -0.18
SMC4-202ENST00000357388 HSPA2P54652 639 aa13.91□□□□□ -0.18
SMC4-202ENST00000357388 CNKSR1Q969H4 720 aa13.91□□□□□ -0.18
SMC4-202ENST00000357388 CALR3Q96L12 384 aaKnown RBP13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms