RNA–Protein interactions for RNA: ENST00000357235.5

CDC42SE1-201, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE1, Length 3,045 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-201ENST00000357235 ARID5AQ03989 594 aa9.12□□□□□ -0.95
CDC42SE1-201ENST00000357235 ACTN3Q08043 901 aaPredicted RBP9.12□□□□□ -0.95
CDC42SE1-201ENST00000357235 NAALADL2Q58DX5 795 aa9.12□□□□□ -0.95
CDC42SE1-201ENST00000357235 RRAGAQ7L523 313 aa9.12□□□□□ -0.95
CDC42SE1-201ENST00000357235 DYMQ7RTS9 669 aa9.12□□□□□ -0.95
CDC42SE1-201ENST00000357235 SH2D3CQ8N5H7 860 aa9.12□□□□□ -0.95
CDC42SE1-201ENST00000357235 CCDC47Q96A33 483 aaKnown RBP9.12□□□□□ -0.95
CDC42SE1-201ENST00000357235 UIMC1Q96RL1 719 aa9.12□□□□□ -0.95
CDC42SE1-201ENST00000357235 RIOK1Q9BRS2 568 aaKnown RBP9.12□□□□□ -0.95
CDC42SE1-201ENST00000357235 VIPAS39Q9H9C1 493 aa9.12□□□□□ -0.95
CDC42SE1-201ENST00000357235 KIF9Q9HAQ2 790 aa9.12□□□□□ -0.95
CDC42SE1-201ENST00000357235 TCP11L1Q9NUJ3 509 aa9.12□□□□□ -0.95
CDC42SE1-201ENST00000357235 PLCG1P19174 1290 aa9.12□□□□□ -0.95
CDC42SE1-201ENST00000357235 TECP42680 631 aa9.12□□□□□ -0.95
CDC42SE1-201ENST00000357235 RCAN1P53805 252 aa9.12□□□□□ -0.95
CDC42SE1-201ENST00000357235 PDCLQ13371 301 aa9.12□□□□□ -0.95
CDC42SE1-201ENST00000357235 PTPROQ16827 1216 aa9.12□□□□□ -0.95
CDC42SE1-201ENST00000357235 PFKFB3Q16875 520 aaPredicted RBP9.12□□□□□ -0.95
CDC42SE1-201ENST00000357235 BRINP3Q76B58 766 aa9.12□□□□□ -0.95
CDC42SE1-201ENST00000357235 CCDC24Q8N4L8 307 aa9.12□□□□□ -0.95
CDC42SE1-201ENST00000357235 ACSBG1Q96GR2 724 aa9.12□□□□□ -0.95
CDC42SE1-201ENST00000357235 FAM184BQ9ULE4 1060 aa9.12□□□□□ -0.95
CDC42SE1-201ENST00000357235 PDS5AQ29RF7 1337 aaKnown RBP9.11□□□□□ -0.95
CDC42SE1-201ENST00000357235 EME2A4GXA9 379 aaPredicted RBP9.11□□□□□ -0.95
CDC42SE1-201ENST00000357235 CCNT1O60563 726 aaKnown RBP9.11□□□□□ -0.95
CDC42SE1-201ENST00000357235 SKAP2O75563 359 aaPredicted RBP9.11□□□□□ -0.95
CDC42SE1-201ENST00000357235 AP1G2O75843 785 aa9.11□□□□□ -0.95
CDC42SE1-201ENST00000357235 DDAH1O94760 285 aa9.11□□□□□ -0.95
CDC42SE1-201ENST00000357235 KRT14P02533 472 aa9.11□□□□□ -0.95
CDC42SE1-201ENST00000357235 SRGNP10124 158 aa9.11□□□□□ -0.95
CDC42SE1-201ENST00000357235 KIF5BP33176 963 aa9.11□□□□□ -0.95
CDC42SE1-201ENST00000357235 PAFAH1B1P43034 410 aa9.11□□□□□ -0.95
CDC42SE1-201ENST00000357235 GUCY2FP51841 1108 aa9.11□□□□□ -0.95
CDC42SE1-201ENST00000357235 ZBED6P86452 979 aa9.11□□□□□ -0.95
CDC42SE1-201ENST00000357235 TFAP4Q01664 338 aa9.11□□□□□ -0.95
CDC42SE1-201ENST00000357235 TTI2Q6NXR4 508 aa9.11□□□□□ -0.95
CDC42SE1-201ENST00000357235 CACNA2D4Q7Z3S7 1137 aa9.11□□□□□ -0.95
CDC42SE1-201ENST00000357235 TMC4Q7Z404 712 aa9.11□□□□□ -0.95
CDC42SE1-201ENST00000357235 SPATA4Q8NEY3 305 aa9.11□□□□□ -0.95
CDC42SE1-201ENST00000357235 ZNF507Q8TCN5 953 aa9.11□□□□□ -0.95
CDC42SE1-201ENST00000357235 THOC1Q96FV9 657 aaKnown RBP9.11□□□□□ -0.95
CDC42SE1-201ENST00000357235 MS4A14Q96JA4 679 aa9.11□□□□□ -0.95
CDC42SE1-201ENST00000357235 RPGRIP1Q96KN7 1286 aa9.11□□□□□ -0.95
CDC42SE1-201ENST00000357235 NLRC4Q9NPP4 1024 aa9.11□□□□□ -0.95
CDC42SE1-201ENST00000357235 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.11□□□□□ -0.95
CDC42SE1-201ENST00000357235 MYH7P12883 1935 aa9.11□□□□□ -0.95
CDC42SE1-201ENST00000357235 A0A1W2PQC6 194 aa9.11□□□□□ -0.95
CDC42SE1-201ENST00000357235 FAM170AA1A519 330 aa9.11□□□□□ -0.95
CDC42SE1-201ENST00000357235 NDUFAB1O14561 156 aa9.11□□□□□ -0.95
CDC42SE1-201ENST00000357235 ZNF263O14978 683 aa9.11□□□□□ -0.95
CDC42SE1-201ENST00000357235 USP17L8P0C7I0 530 aa9.11□□□□□ -0.95
CDC42SE1-201ENST00000357235 CALML3P27482 149 aa9.11□□□□□ -0.95
CDC42SE1-201ENST00000357235 GBP2P32456 591 aaPredicted RBP9.11□□□□□ -0.95
CDC42SE1-201ENST00000357235 PEX19P40855 299 aa9.11□□□□□ -0.95
CDC42SE1-201ENST00000357235 TRAPPC10P48553 1259 aa9.11□□□□□ -0.95
CDC42SE1-201ENST00000357235 VAV2P52735 878 aa9.11□□□□□ -0.95
CDC42SE1-201ENST00000357235 RASSF7Q02833 373 aa9.11□□□□□ -0.95
CDC42SE1-201ENST00000357235 TXNRD1Q16881 649 aa9.11□□□□□ -0.95
CDC42SE1-201ENST00000357235 C8orf74Q6P047 294 aa9.11□□□□□ -0.95
CDC42SE1-201ENST00000357235 CABP7Q86V35 215 aa9.11□□□□□ -0.95
CDC42SE1-201ENST00000357235 P2RX5Q93086 422 aa9.11□□□□□ -0.95
CDC42SE1-201ENST00000357235 DYNLL2Q96FJ2 89 aa9.11□□□□□ -0.95
CDC42SE1-201ENST00000357235 THAP9Q9H5L6 903 aa9.11□□□□□ -0.95
CDC42SE1-201ENST00000357235 MKNK2Q9HBH9 465 aa9.11□□□□□ -0.95
CDC42SE1-201ENST00000357235 BTG4Q9NY30 223 aa9.11□□□□□ -0.95
CDC42SE1-201ENST00000357235 NID2Q14112 1375 aa9.11□□□□□ -0.95
CDC42SE1-201ENST00000357235 TARSL2A2RTX5 802 aaKnown RBP9.1□□□□□ -0.95
CDC42SE1-201ENST00000357235 ZSCAN5CA6NGD5 496 aaPredicted RBP9.1□□□□□ -0.95
CDC42SE1-201ENST00000357235 EPHB6O15197 1021 aa9.1□□□□□ -0.95
CDC42SE1-201ENST00000357235 MEFVO15553 781 aaPredicted RBP9.1□□□□□ -0.95
CDC42SE1-201ENST00000357235 HSF2BPO75031 334 aa9.1□□□□□ -0.95
CDC42SE1-201ENST00000357235 SNUPNO95149 360 aaKnown RBP9.1□□□□□ -0.95
CDC42SE1-201ENST00000357235 PRDX5P30044 214 aa9.1□□□□□ -0.95
CDC42SE1-201ENST00000357235 EIF4A3P38919 411 aaKnown RBP9.1□□□□□ -0.95
CDC42SE1-201ENST00000357235 KIF11P52732 1056 aa9.1□□□□□ -0.95
CDC42SE1-201ENST00000357235 PPFIA1Q13136 1202 aa9.1□□□□□ -0.95
CDC42SE1-201ENST00000357235 ZNF34Q8IZ26 560 aa9.1□□□□□ -0.95
CDC42SE1-201ENST00000357235 KIRREL3Q8IZU9 778 aa9.1□□□□□ -0.95
CDC42SE1-201ENST00000357235 CCDC155Q8N6L0 562 aa9.1□□□□□ -0.95
CDC42SE1-201ENST00000357235 PNMA1Q8ND90 353 aa9.1□□□□□ -0.95
CDC42SE1-201ENST00000357235 TRIM58Q8NG06 486 aa9.1□□□□□ -0.95
CDC42SE1-201ENST00000357235 MICAL1Q8TDZ2 1067 aa9.1□□□□□ -0.95
CDC42SE1-201ENST00000357235 ARL8AQ96BM9 186 aa9.1□□□□□ -0.95
CDC42SE1-201ENST00000357235 ALS2CR12Q96Q35 445 aa9.1□□□□□ -0.95
CDC42SE1-201ENST00000357235 DUSP9Q99956 384 aaKnown RBP9.1□□□□□ -0.95
CDC42SE1-201ENST00000357235 MTA3Q9BTC8 594 aa9.1□□□□□ -0.95
CDC42SE1-201ENST00000357235 SNX12Q9UMY4 172 aa9.1□□□□□ -0.95
CDC42SE1-201ENST00000357235 PCDHA13Q9Y5I0 950 aa9.1□□□□□ -0.95
CDC42SE1-201ENST00000357235 USP17L3A6NCW0 530 aa9.1□□□□□ -0.95
CDC42SE1-201ENST00000357235 USP17L4A6NCW7 530 aa9.1□□□□□ -0.95
CDC42SE1-201ENST00000357235 EIF3HO15372 352 aaKnown RBP eCLIP9.1□□□□□ -0.95
CDC42SE1-201ENST00000357235 GLI3P10071 1580 aa9.1□□□□□ -0.95
CDC42SE1-201ENST00000357235 KLRK1P26718 216 aa9.1□□□□□ -0.95
CDC42SE1-201ENST00000357235 MAGEA1P43355 309 aa9.1□□□□□ -0.95
CDC42SE1-201ENST00000357235 SMTNP53814 917 aa9.1□□□□□ -0.95
CDC42SE1-201ENST00000357235 GFPT1Q06210 699 aaPredicted RBP9.1□□□□□ -0.95
CDC42SE1-201ENST00000357235 PSMD2Q13200 908 aa9.1□□□□□ -0.95
CDC42SE1-201ENST00000357235 CCDC40Q4G0X9 1142 aa9.1□□□□□ -0.95
CDC42SE1-201ENST00000357235 ARL6IP4Q66PJ3 421 aaKnown RBP9.1□□□□□ -0.95
CDC42SE1-201ENST00000357235 USP17L1Q7RTZ2 530 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms