RNA–Protein interactions for RNA: ENST00000357008.6

CHD4-201, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHD4, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-201ENST00000357008 KRT3P12035 628 aa16.16■□□□□ 0.18
CHD4-201ENST00000357008 RESTQ13127 1097 aa16.16■□□□□ 0.18
CHD4-201ENST00000357008 KAZNQ674X7 775 aa16.16■□□□□ 0.18
CHD4-201ENST00000357008 ZNF589Q86UQ0 364 aaPredicted RBP16.16■□□□□ 0.18
CHD4-201ENST00000357008 ZBTB8OSQ8IWT0 167 aa16.16■□□□□ 0.18
CHD4-201ENST00000357008 ZNF526Q8TF50 670 aaPredicted RBP16.16■□□□□ 0.18
CHD4-201ENST00000357008 TRIM11Q96F44 468 aa16.16■□□□□ 0.18
CHD4-201ENST00000357008 KRT26Q7Z3Y9 468 aa16.16■□□□□ 0.18
CHD4-201ENST00000357008 SCYL1Q96KG9 808 aa16.16■□□□□ 0.18
CHD4-201ENST00000357008 SAMSN1Q9NSI8 373 aaKnown RBP16.16■□□□□ 0.18
CHD4-201ENST00000357008 C10orf76Q5T2E6 689 aa16.16■□□□□ 0.18
CHD4-201ENST00000357008 ZNF521Q96K83 1311 aa16.16■□□□□ 0.18
CHD4-201ENST00000357008 NR1D1P20393 614 aa16.16■□□□□ 0.18
CHD4-201ENST00000357008 HAUS8Q9BT25 410 aa16.16■□□□□ 0.18
CHD4-201ENST00000357008 FTOQ9C0B1 505 aaKnown RBP eCLIP16.16■□□□□ 0.184e-11■■□□□ 11.8
CHD4-201ENST00000357008 ABCB6Q9NP58 842 aa16.16■□□□□ 0.18
CHD4-201ENST00000357008 A0A087WWV3 80 aa16.16■□□□□ 0.18
CHD4-201ENST00000357008 KIF11P52732 1056 aa16.16■□□□□ 0.18
CHD4-201ENST00000357008 RINT1Q6NUQ1 792 aa16.16■□□□□ 0.18
CHD4-201ENST00000357008 THAP9Q9H5L6 903 aa16.16■□□□□ 0.18
CHD4-201ENST00000357008 STK17AQ9UEE5 414 aa16.16■□□□□ 0.18
CHD4-201ENST00000357008 IVNS1ABPQ9Y6Y0 642 aa16.16■□□□□ 0.18
CHD4-201ENST00000357008 ECEL1O95672 775 aa16.15■□□□□ 0.18
CHD4-201ENST00000357008 MMP1P03956 469 aa16.15■□□□□ 0.18
CHD4-201ENST00000357008 ASPHQ12797 758 aa16.15■□□□□ 0.18
CHD4-201ENST00000357008 CUL4BQ13620 913 aa16.15■□□□□ 0.18
CHD4-201ENST00000357008 SLMAPQ14BN4 828 aa16.15■□□□□ 0.18
CHD4-201ENST00000357008 TERF2Q15554 542 aa16.15■□□□□ 0.18
CHD4-201ENST00000357008 MAP7D3Q8IWC1 876 aa16.15■□□□□ 0.18
CHD4-201ENST00000357008 NHEJ1Q9H9Q4 299 aaPredicted RBP16.15■□□□□ 0.18
CHD4-201ENST00000357008 TXLNGQ9NUQ3 528 aa16.15■□□□□ 0.18
CHD4-201ENST00000357008 MAD1L1Q9Y6D9 718 aa16.15■□□□□ 0.18
CHD4-201ENST00000357008 EIF4G3O43432 1585 aaKnown RBP16.15■□□□□ 0.18
CHD4-201ENST00000357008 GOLGA8QA0A0J9YX86 632 aa16.15■□□□□ 0.18
CHD4-201ENST00000357008 GOLGA8OA6NCC3 632 aa16.15■□□□□ 0.18
CHD4-201ENST00000357008 GOLGA8NF8WBI6 632 aa16.15■□□□□ 0.18
CHD4-201ENST00000357008 HOXA7P31268 230 aaPredicted RBP16.15■□□□□ 0.18
CHD4-201ENST00000357008 EIF3BP55884 814 aaKnown RBP16.15■□□□□ 0.18
CHD4-201ENST00000357008 ZKSCAN8Q15776 578 aaPredicted RBP16.15■□□□□ 0.18
CHD4-201ENST00000357008 PTPN21Q16825 1174 aa16.15■□□□□ 0.18
CHD4-201ENST00000357008 PLA2G4DQ86XP0 818 aa16.15■□□□□ 0.18
CHD4-201ENST00000357008 GLG1Q92896 1179 aa16.15■□□□□ 0.18
CHD4-201ENST00000357008 NT5C1BQ96P26 610 aa16.15■□□□□ 0.18
CHD4-201ENST00000357008 TUBB6Q9BUF5 446 aa16.15■□□□□ 0.18
CHD4-201ENST00000357008 PDE8BO95263 885 aa16.15■□□□□ 0.18
CHD4-201ENST00000357008 PSMC2P35998 433 aaKnown RBP16.15■□□□□ 0.18
CHD4-201ENST00000357008 SARM1Q6SZW1 724 aa16.15■□□□□ 0.18
CHD4-201ENST00000357008 TTLL7Q6ZT98 887 aa16.15■□□□□ 0.18
CHD4-201ENST00000357008 NOD1Q9Y239 953 aa16.15■□□□□ 0.18
CHD4-201ENST00000357008 MOCS3O95396 460 aa16.15■□□□□ 0.18
CHD4-201ENST00000357008 ODR4Q5SWX8 454 aa16.15■□□□□ 0.18
CHD4-201ENST00000357008 LRRC47Q8N1G4 583 aaKnown RBP16.15■□□□□ 0.18
CHD4-201ENST00000357008 TLR7Q9NYK1 1049 aaKnown RBP16.15■□□□□ 0.18
CHD4-201ENST00000357008 DMP1Q13316 513 aaPredicted RBP16.15■□□□□ 0.18
CHD4-201ENST00000357008 EMBQ6PCB8 327 aa16.15■□□□□ 0.18
CHD4-201ENST00000357008 FBXO41Q8TF61 875 aa16.15■□□□□ 0.18
CHD4-201ENST00000357008 ORAI2Q96SN7 254 aa16.15■□□□□ 0.18
CHD4-201ENST00000357008 NACA2Q9H009 215 aa16.15■□□□□ 0.18
CHD4-201ENST00000357008 HESX1Q9UBX0 185 aa16.15■□□□□ 0.18
CHD4-201ENST00000357008 TESPA1A2RU30 521 aaPredicted RBP16.14■□□□□ 0.18
CHD4-201ENST00000357008 HNRNPH2P55795 449 aaKnown RBP16.14■□□□□ 0.18
CHD4-201ENST00000357008 TMTC3Q6ZXV5 915 aa16.14■□□□□ 0.18
CHD4-201ENST00000357008 HMGB1P1B2RPK0 211 aaPredicted RBP16.14■□□□□ 0.17
CHD4-201ENST00000357008 H7C0C1 242 aa16.14■□□□□ 0.17
CHD4-201ENST00000357008 GSTA1P08263 222 aa16.14■□□□□ 0.17
CHD4-201ENST00000357008 GSTA2P09210 222 aa16.14■□□□□ 0.17
CHD4-201ENST00000357008 CXCR5P32302 372 aa16.14■□□□□ 0.17
CHD4-201ENST00000357008 ATP5OP48047 213 aa16.14■□□□□ 0.17
CHD4-201ENST00000357008 MMEL1Q495T6 779 aa16.14■□□□□ 0.17
CHD4-201ENST00000357008 GRAMD1CQ8IYS0 662 aa16.14■□□□□ 0.17
CHD4-201ENST00000357008 SUPT20HQ8NEM7 779 aa16.14■□□□□ 0.17
CHD4-201ENST00000357008 GAP43P17677 238 aa16.14■□□□□ 0.17
CHD4-201ENST00000357008 SGO2Q562F6 1265 aa16.14■□□□□ 0.17
CHD4-201ENST00000357008 KSR1Q8IVT5 923 aa16.14■□□□□ 0.17
CHD4-201ENST00000357008 SDCCAG3Q96C92 435 aa16.14■□□□□ 0.17
CHD4-201ENST00000357008 ZNF277Q9NRM2 450 aaPredicted RBP16.14■□□□□ 0.17
CHD4-201ENST00000357008 SRPRBQ9Y5M8 271 aaKnown RBP16.14■□□□□ 0.17
CHD4-201ENST00000357008 GPC4O75487 556 aa16.14■□□□□ 0.17
CHD4-201ENST00000357008 PHKG2P15735 406 aa16.14■□□□□ 0.17
CHD4-201ENST00000357008 CCNE1P24864 410 aa16.14■□□□□ 0.17
CHD4-201ENST00000357008 EIF4A3P38919 411 aaKnown RBP16.14■□□□□ 0.17
CHD4-201ENST00000357008 TCP11X2Q5H9J9 407 aa16.14■□□□□ 0.17
CHD4-201ENST00000357008 PDCD7Q8N8D1 485 aaKnown RBP16.14■□□□□ 0.17
CHD4-201ENST00000357008 POLD1P28340 1107 aa16.14■□□□□ 0.17
CHD4-201ENST00000357008 GTF2IP78347 998 aa16.14■□□□□ 0.17
CHD4-201ENST00000357008 NEK9Q8TD19 979 aa16.14■□□□□ 0.17
CHD4-201ENST00000357008 FTCDO95954 541 aa16.13■□□□□ 0.17
CHD4-201ENST00000357008 GUCY2CP25092 1073 aa16.13■□□□□ 0.17
CHD4-201ENST00000357008 PDE1BQ01064 536 aa16.13■□□□□ 0.17
CHD4-201ENST00000357008 LRGUKQ96M69 825 aa16.13■□□□□ 0.17
CHD4-201ENST00000357008 CSRNP1Q96S65 589 aa16.13■□□□□ 0.17
CHD4-201ENST00000357008 IFNAR1P17181 557 aa16.13■□□□□ 0.17
CHD4-201ENST00000357008 PHKA1P46020 1223 aa16.13■□□□□ 0.17
CHD4-201ENST00000357008 RCN2Q14257 317 aa16.13■□□□□ 0.17
CHD4-201ENST00000357008 DIXDC1Q155Q3 683 aa16.13■□□□□ 0.17
CHD4-201ENST00000357008 TMCO4Q5TGY1 634 aa16.13■□□□□ 0.17
CHD4-201ENST00000357008 SLC17A8Q8NDX2 589 aa16.13■□□□□ 0.17
CHD4-201ENST00000357008 JPH2Q9BR39 696 aaPredicted RBP16.13■□□□□ 0.17
CHD4-201ENST00000357008 ANAPC5Q9UJX4 755 aa16.13■□□□□ 0.17
CHD4-201ENST00000357008 NOVA2Q9UNW9 492 aaKnown RBP16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms