RNA–Protein interactions for RNA: ENST00000356922.5

LIG4-201, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 4,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-201ENST00000356922 GHRHRQ02643 423 aa4.62□□□□□ -1.67
LIG4-201ENST00000356922 RESTQ13127 1097 aa4.62□□□□□ -1.67
LIG4-201ENST00000356922 CPLX2Q6PUV4 134 aaKnown RBP4.62□□□□□ -1.67
LIG4-201ENST00000356922 LENG1Q96BZ8 264 aaPredicted RBP4.62□□□□□ -1.67
LIG4-201ENST00000356922 RMDN3Q96TC7 470 aa4.62□□□□□ -1.67
LIG4-201ENST00000356922 TFIP11Q9UBB9 837 aaKnown RBP4.62□□□□□ -1.67
LIG4-201ENST00000356922 MYH7BA7E2Y1 1941 aa4.62□□□□□ -1.67
LIG4-201ENST00000356922 REV3LO60673 3130 aa4.62□□□□□ -1.67
LIG4-201ENST00000356922 SLC37A4O43826 429 aa4.62□□□□□ -1.67
LIG4-201ENST00000356922 SORBS3O60504 671 aa4.62□□□□□ -1.67
LIG4-201ENST00000356922 ATP9AO75110 1047 aa4.62□□□□□ -1.67
LIG4-201ENST00000356922 TDP2O95551 362 aa4.62□□□□□ -1.67
LIG4-201ENST00000356922 MYCP01106 439 aaPredicted RBP4.62□□□□□ -1.67
LIG4-201ENST00000356922 FCER1AP12319 257 aa4.62□□□□□ -1.67
LIG4-201ENST00000356922 ADCY7P51828 1080 aa4.62□□□□□ -1.67
LIG4-201ENST00000356922 GRIN1Q05586 938 aa4.62□□□□□ -1.67
LIG4-201ENST00000356922 SEMA3FQ13275 785 aa4.62□□□□□ -1.67
LIG4-201ENST00000356922 MCTP1Q6DN14 999 aa4.62□□□□□ -1.67
LIG4-201ENST00000356922 PLEKHH3Q7Z736 793 aa4.62□□□□□ -1.67
LIG4-201ENST00000356922 TRPV1Q8NER1 839 aa4.62□□□□□ -1.67
LIG4-201ENST00000356922 TBCKQ8TEA7 893 aa4.62□□□□□ -1.67
LIG4-201ENST00000356922 TRIB2Q92519 343 aa4.62□□□□□ -1.67
LIG4-201ENST00000356922 LENG9Q96B70 501 aa4.62□□□□□ -1.67
LIG4-201ENST00000356922 MMP19Q99542 508 aa4.62□□□□□ -1.67
LIG4-201ENST00000356922 BEGAINQ9BUH8 593 aa4.62□□□□□ -1.67
LIG4-201ENST00000356922 WDR11Q9BZH6 1224 aa4.62□□□□□ -1.67
LIG4-201ENST00000356922 KATNBL1Q9H079 304 aa4.62□□□□□ -1.67
LIG4-201ENST00000356922 PCDH10Q9P2E7 1040 aa4.62□□□□□ -1.67
LIG4-201ENST00000356922 MRPL11Q9Y3B7 192 aaKnown RBP4.62□□□□□ -1.67
LIG4-201ENST00000356922 PCDHB6Q9Y5E3 794 aa4.62□□□□□ -1.67
LIG4-201ENST00000356922 CHD7Q9P2D1 2997 aa4.61□□□□□ -1.67
LIG4-201ENST00000356922 ABCB11O95342 1321 aa4.61□□□□□ -1.67
LIG4-201ENST00000356922 SPTBN5Q9NRC6 3674 aaKnown RBP4.61□□□□□ -1.67
LIG4-201ENST00000356922 GCOM1H8Y6P7 765 aaPredicted RBP4.61□□□□□ -1.67
LIG4-201ENST00000356922 TNPO2O14787 897 aaKnown RBP4.61□□□□□ -1.67
LIG4-201ENST00000356922 ARIH2O95376 493 aa4.61□□□□□ -1.67
LIG4-201ENST00000356922 SLC25A27O95847 323 aa4.61□□□□□ -1.67
LIG4-201ENST00000356922 POLR2MP0CAP2 368 aa4.61□□□□□ -1.67
LIG4-201ENST00000356922 CEBPZQ03701 1054 aaKnown RBP4.61□□□□□ -1.67
LIG4-201ENST00000356922 PGM5Q15124 567 aa4.61□□□□□ -1.67
LIG4-201ENST00000356922 IL17AQ16552 155 aa4.61□□□□□ -1.67
LIG4-201ENST00000356922 ANO1Q5XXA6 986 aa4.61□□□□□ -1.67
LIG4-201ENST00000356922 MAMDC4Q6UXC1 1216 aa4.61□□□□□ -1.67
LIG4-201ENST00000356922 OTOP1Q7RTM1 612 aa4.61□□□□□ -1.67
LIG4-201ENST00000356922 CHST13Q8NET6 341 aa4.61□□□□□ -1.67
LIG4-201ENST00000356922 CUL5Q93034 780 aa4.61□□□□□ -1.67
LIG4-201ENST00000356922 MAML3Q96JK9 1138 aa4.61□□□□□ -1.67
LIG4-201ENST00000356922 PDCD2LQ9BRP1 358 aa4.61□□□□□ -1.67
LIG4-201ENST00000356922 TMEM60Q9H2L4 133 aa4.61□□□□□ -1.67
LIG4-201ENST00000356922 MROH8Q9H579 483 aa4.61□□□□□ -1.67
LIG4-201ENST00000356922 GDPD2Q9HCC8 539 aa4.61□□□□□ -1.67
LIG4-201ENST00000356922 SH3GLB2Q9NR46 395 aa4.61□□□□□ -1.67
LIG4-201ENST00000356922 PXMP2Q9NR77 195 aa4.61□□□□□ -1.67
LIG4-201ENST00000356922 CLIC4Q9Y696 253 aa4.61□□□□□ -1.67
LIG4-201ENST00000356922 MGAMO43451 1857 aa4.61□□□□□ -1.67
LIG4-201ENST00000356922 TCHHQ07283 1943 aa4.61□□□□□ -1.67
LIG4-201ENST00000356922 C11orf97A0A1B0GVM6 126 aaPredicted RBP4.61□□□□□ -1.67
LIG4-201ENST00000356922 ESYT2A0FGR8 921 aa4.61□□□□□ -1.67
LIG4-201ENST00000356922 NR3C2P08235 984 aa4.61□□□□□ -1.67
LIG4-201ENST00000356922 FDX1P10109 184 aa4.61□□□□□ -1.67
LIG4-201ENST00000356922 ARP10275 920 aa4.61□□□□□ -1.67
LIG4-201ENST00000356922 BECN1Q14457 450 aa4.61□□□□□ -1.67
LIG4-201ENST00000356922 VSIG10LQ86VR7 867 aa4.61□□□□□ -1.67
LIG4-201ENST00000356922 NOSTRINQ8IVI9 506 aa4.61□□□□□ -1.67
LIG4-201ENST00000356922 REXO1Q8N1G1 1221 aaKnown RBP4.61□□□□□ -1.67
LIG4-201ENST00000356922 C4orf32Q8N8J7 132 aa4.61□□□□□ -1.67
LIG4-201ENST00000356922 RGS22Q8NE09 1264 aa4.61□□□□□ -1.67
LIG4-201ENST00000356922 SHCBP1Q8NEM2 672 aa4.61□□□□□ -1.67
LIG4-201ENST00000356922 SH3TC2Q8TF17 1288 aa4.61□□□□□ -1.67
LIG4-201ENST00000356922 ANO3Q9BYT9 981 aa4.61□□□□□ -1.67
LIG4-201ENST00000356922 VCANP13611 3396 aa4.61□□□□□ -1.67
LIG4-201ENST00000356922 RPTORQ8N122 1335 aa4.61□□□□□ -1.67
LIG4-201ENST00000356922 IGLV3-22A0A075B6J6 115 aa4.61□□□□□ -1.67
LIG4-201ENST00000356922 POTEB2H3BUK9 544 aa4.61□□□□□ -1.67
LIG4-201ENST00000356922 ZSCAN22P10073 491 aaPredicted RBP4.61□□□□□ -1.67
LIG4-201ENST00000356922 MAPK4P31152 587 aa4.61□□□□□ -1.67
LIG4-201ENST00000356922 ALDH5A1P51649 535 aaPredicted RBP4.61□□□□□ -1.67
LIG4-201ENST00000356922 DNM1Q05193 864 aaKnown RBP4.61□□□□□ -1.67
LIG4-201ENST00000356922 DAGLBQ8NCG7 672 aa4.61□□□□□ -1.67
LIG4-201ENST00000356922 PPP1R13LQ8WUF5 828 aa4.61□□□□□ -1.67
LIG4-201ENST00000356922 COPS5Q92905 334 aa4.61□□□□□ -1.67
LIG4-201ENST00000356922 C6orf50Q9HD87 102 aa4.61□□□□□ -1.67
LIG4-201ENST00000356922 SAGE1Q9NXZ1 904 aa4.61□□□□□ -1.67
LIG4-201ENST00000356922 H3BQV1 296 aa4.6□□□□□ -1.67
LIG4-201ENST00000356922 FKTNO75072 461 aa4.6□□□□□ -1.67
LIG4-201ENST00000356922 MYCLP12524 364 aaPredicted RBP4.6□□□□□ -1.67
LIG4-201ENST00000356922 EDNRBP24530 442 aa4.6□□□□□ -1.67
LIG4-201ENST00000356922 CDC25AP30304 524 aa4.6□□□□□ -1.67
LIG4-201ENST00000356922 KRT2P35908 639 aa4.6□□□□□ -1.67
LIG4-201ENST00000356922 MRPL12P52815 198 aaKnown RBP4.6□□□□□ -1.67
LIG4-201ENST00000356922 ARHGAP4P98171 946 aa4.6□□□□□ -1.67
LIG4-201ENST00000356922 MAP2K5Q13163 448 aa4.6□□□□□ -1.67
LIG4-201ENST00000356922 KCTD2Q14681 263 aa4.6□□□□□ -1.67
LIG4-201ENST00000356922 ZNF174Q15697 407 aa4.6□□□□□ -1.67
LIG4-201ENST00000356922 LETM2Q2VYF4 491 aa4.6□□□□□ -1.67
LIG4-201ENST00000356922 IFFO2Q5TF58 517 aa4.6□□□□□ -1.67
LIG4-201ENST00000356922 TAPT1Q6NXT6 567 aa4.6□□□□□ -1.67
LIG4-201ENST00000356922 DHX30Q7L2E3 1194 aaKnown RBP eCLIP4.6□□□□□ -1.67
LIG4-201ENST00000356922 DPP9Q86TI2 863 aa4.6□□□□□ -1.67
LIG4-201ENST00000356922 FBXO16Q8IX29 292 aaPredicted RBP4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms